- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C5.74.v1.A...' >
- Molecular Tool 'Hox1-TALEN (Yoshida 2017)' >
- Transcript 'KH2012:KH.S1466.1.v1...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S374.g01183.02.t
Possible name(s)
AGAP6; GIT1; GIT2
Gene model
Location
S374 [21,024 / 25,358]
Amino acid sequence
Length: 764
>Harore.CG.MTP2014.S374.g01183.02.p
MARNRINARTGTEVCSDCSAADPSWASINRGVLICSDCASIHRSLGRHISQVKHLQKCKW
HPNTLSMVQHLVAASANSIWEHSLLDPTQMRSGKRKPNPSDHVHPTKSEFIKSKYLNLSF
VHRLAIREEDQMITDISKQLHSSVRTGNLETSLRLLSSGAQPNYFNAEKGNTSLHVAAKA
GQALQVELLMTYGADPLALDSNNKTAEELARADNHVDLAERLVDLQYELSDRLSYFVSGQ
MPDHKAGKHFLVPKPQEYKMASTGKKRLQKLNDMTFEELAMDVYDEVDRRELEVVWQESQ
KNILLPNKGSNPAFQYDHQVVPFLPVNPDYSTTRNQGRQKLGIFKDTELKILICDIIGEI
VRRTNCGAHLSGSSEDPVYDLPPDGDVECMSGDSSTSQPTMVKDSLTISKEEFLSLQQQL
SEREAECTKLQELNRDLSHKVTSLAKQNHELNKKVQDVPLSHTLPSIPKKPDFFKNSPHV
PGSPSGRPFSVFNPNESIENQIMNSEDDKENRRRTIHVETPTAISAEEISVRASNRERLE
KAVVQVASHSSTGSDYDNHGSQKKEKDSENKEEAGKLPTSPEQKSDQVKEENSNSNNNQP
PQPAVETANEPAAEDSQTEASRSESSSPQFEATEEEVIWPEHSALMKKTELLTKNIQTLL
QTAQIKKTENYLDCAENILSAVSDVVALFDKPYLPSIKSVLQSICGSAHKLRNRCKETAD
QKSKPEHHKQLTENIISYAYEIAIAEKQLVMMAPKEDAEASSSS
Nucleotide sequence
Length: 3,071
>Harore.CG.MTP2014.S374.g01183.02.t
AGCATCAAGTCGGGAACTATTTTGATACGAAGTAGTGAGTTTTAACAGGAATGGCTAGAA
ACAGAATCAATGCTCGAACTGGAACTGAAGTTTGCTCAGACTGTTCAGCAGCAGACCCTA
GTTGGGCTTCCATCAACCGTGGAGTTCTGATATGCAGTGACTGTGCGAGCATTCACAGAA
GTCTGGGGAGGCATATATCGCAGGTCAAACATCTACAGAAATGCAAATGGCATCCCAATA
CACTCAGCATGGTTCAACACCTTGTGGCAGCCAGTGCCAATTCAATATGGGAACATTCTC
TTCTCGATCCAACTCAGATGAGAAGCGGAAAGAGGAAACCAAATCCATCCGATCACGTTC
ATCCAACGAAATCGGAATTCATTAAGTCAAAATACCTGAATCTTTCATTCGTGCATCGCC
TTGCCATTCGCGAAGAAGATCAGATGATTACTGACATAAGTAAACAGCTTCATTCGAGCG
TACGAACTGGGAATTTGGAAACGAGCTTGCGACTGCTCTCGTCCGGAGCTCAGCCGAACT
ATTTTAATGCTGAGAAGGGAAATACTTCTTTACACGTTGCTGCTAAGGCAGGACAGGCTC
TGCAAGTGGAATTGCTCATGACGTATGGCGCTGATCCTCTTGCGCTGGACAGCAACAACA
AGACTGCTGAAGAGTTAGCACGAGCTGATAATCATGTCGATCTTGCCGAGAGACTCGTCG
ACCTGCAGTACGAATTATCAGACAGACTTTCGTATTTTGTCTCTGGTCAAATGCCAGATC
ACAAAGCAGGGAAGCACTTTTTAGTACCAAAGCCACAGGAATATAAAATGGCAAGCACTG
GAAAAAAGCGTCTTCAAAAGCTGAACGATATGACATTCGAGGAGTTAGCCATGGATGTCT
ACGACGAAGTGGATCGCAGAGAACTGGAGGTTGTGTGGCAAGAATCTCAGAAAAATATTT
TGCTTCCGAATAAGGGCTCCAACCCAGCCTTTCAGTACGATCATCAGGTTGTCCCCTTCC
TTCCTGTGAATCCAGATTATTCAACAACTAGAAATCAAGGAAGACAGAAACTTGGCATAT
TCAAAGACACCGAACTCAAAATTCTTATCTGTGATATTATCGGTGAGATTGTTCGAAGAA
CAAACTGCGGAGCCCACCTATCTGGAAGCTCAGAGGATCCTGTATACGATCTTCCTCCCG
ATGGAGATGTTGAGTGTATGTCGGGAGATTCTTCTACAAGTCAACCTACAATGGTCAAGG
ACAGTTTGACCATATCAAAAGAAGAATTCCTGAGCCTTCAACAACAACTTTCTGAAAGAG
AAGCGGAATGTACTAAGCTCCAAGAATTGAACAGAGATCTGTCTCATAAAGTAACCTCTT
TGGCGAAGCAAAACCACGAGTTGAATAAAAAAGTTCAAGATGTCCCGCTATCACACACAC
TTCCGTCAATCCCCAAAAAGCCGGATTTTTTCAAAAACAGCCCGCACGTACCTGGGAGCC
CGAGCGGACGACCATTCTCGGTCTTCAATCCTAATGAAAGCATAGAAAATCAAATTATGA
ACTCTGAAGACGACAAGGAGAATAGAAGGAGGACTATCCATGTCGAGACGCCCACTGCCA
TTTCAGCCGAAGAAATATCAGTTCGCGCTTCAAATCGAGAGCGGTTGGAAAAAGCTGTTG
TCCAGGTTGCATCTCACAGCAGCACTGGTAGTGATTATGATAATCATGGCAGTCAGAAAA
AGGAAAAAGATTCGGAAAATAAAGAAGAAGCTGGGAAACTCCCAACATCGCCGGAGCAAA
AATCTGATCAAGTGAAAGAAGAAAATTCAAACAGCAATAACAACCAGCCACCGCAACCAG
CAGTGGAAACAGCAAATGAACCTGCGGCTGAAGACAGTCAAACTGAAGCTAGTCGTAGCG
AATCGAGCAGCCCACAGTTCGAGGCAACAGAAGAAGAAGTTATCTGGCCCGAACATTCGG
CATTAATGAAAAAGACTGAATTGCTCACAAAAAATATCCAAACGCTTCTACAAACGGCTC
AGATTAAAAAGACTGAAAATTATTTAGATTGTGCAGAAAATATCCTCTCCGCTGTGTCTG
ACGTCGTCGCTCTGTTTGATAAGCCATATCTTCCAAGCATCAAATCCGTATTGCAGTCAA
TATGCGGAAGCGCTCACAAACTTAGAAACAGATGTAAAGAAACCGCAGATCAAAAAAGTA
AACCAGAGCATCACAAACAACTAACTGAAAATATCATTTCATATGCATATGAGATCGCTA
TAGCTGAAAAGCAGTTGGTTATGATGGCTCCTAAAGAGGATGCGGAAGCGTCGTCAAGTT
CTTGAAAAAGCAGTTGCCAACATAAGAAATTGGATAAAACTGCCTGGTAATTTTTAAGTT
GTTCTGAATTCATTCAATTTGAAAAGTTTTTTGTTGAACAACAAATATTGTTTATTTTTG
TTTGTGTAAATATTGTACTTTTTGTGTTACTCTATATGCATGCTGCGGATTATGAGATCC
ATCTATCGGAGTGGATTATGACAAACATACATTTTGGGAATCTGTTTCATTTATATCATG
TATCGGCATTTTCCTGTATCAATACAAATCGGAGGTATTTCTAGCTCTACTTAAATTCTG
TATTTTGCCAGGTGTGTGATTCATTTCCCTAAAATGCATATGTAATCGATTTGGAGTTTG
TTTTTTTGTGTATGCGTATTTCAACTGTAAACCTATTAATTAAAGTTGCTCTCAAATCAT
GAAGATATATGTATCGCGACGATCATCACATTCATGCTTTGTGTTTCAATATCGTATTGT
ATATTCTGCCTAGTGAATTTCATTGTAGTATCTTAGGCTGCTGTGTTAGCTGTAACTAAG
CATGAAAATATGTAATTGTCTTCCCACCACTCATGCTCGCTCATATCTTTGAGCTAAAAG
TACAAAAGCATTAATACCATAATTGGATCGTATGTAATAGTTAATGCCAATATTGTCCTT
GAGAGTACAATGAGCTTGATGCATATTATTCTAACCTTCATAGACGAGATTAATAAATTT
ATATATCCAAA
| ProSiteProfiles |
ArfGAP_dom (IPR001164) - T[1-128] 21.281 |
| SMART |
ArfGAP_dom (IPR001164) - T[2-128] 6.3E-30 |
| Gene3D |
ArfGAP_dom_sf (IPR038508) - T[2-123] 5.2E-34 |
| Pfam |
ArfGAP_dom (IPR001164) - T[6-122] 1.8E-26 |
| SUPERFAMILY |
ARFGAP/RecO (IPR037278) - T[8-123] 4.05E-27 |
| PRINTS |
ArfGAP_dom (IPR001164) - T[12-31] 1.7E-9 - T[31-48] 1.7E-9 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[114-223] 1.23328E-14 |
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[124-222] 6.0E-16 |
| SMART |
Ankyrin_rpt (IPR002110) - T[135-164] 460.0 - T[169-198] 0.089 - T[202-231] 2500.0 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[139-225] 5.8E-16 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[140-246] 19.969 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[169-201] 11.942 |
| SMART |
GIT_SHD (IPR013724) - T[264-294] 7.9E-7 - T[337-367] 0.76 |
| Pfam |
GIT_SHD (IPR013724) - T[264-291] 5.6E-11 |
| Pfam |
GIT1_C (IPR022018) - T[640-752] 5.4E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GIT2_HUMAN | 38.793 % | 493 | 3.25E-164 |
| GIT1_HUMAN | 39.313 % | 475 | 2.54E-157 |
| AGAP6_HUMAN | 33.333 % | 110 | 4.5E-25 |