- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S36.g09293.01.t
Possible name(s)
TMTC1; TMTC2; TMTC3
Gene model
Location
S36 [21,902 / 39,836]
Amino acid sequence
Length: 926
>Harore.CG.MTP2014.S36.g09293.01.p
MNYQVEVLCFFVAVIAYINTFQAEFVYDDNRAILKNVDIRPTMPLYKVFIHDFWGTPMIH
SGSHKSYRPITVLTFRLNYVISGLQPWSYHVTNTMLHAFTTWLFVTFTRTRIFVAKSKDQ
YDSRSLISGTYLGLIFALHPIHTEAVAGLVGRADVLATLFTLAALISYARICDLSNRVLS
DSARHRNESLQTTRRDFSATFCSKNNPVKTNARKRRNPNKSLFRSKQNSMSEYPDKCSKT
RRKTKRIINSNVGSEPFEASLSAQDADSACRLNNPNILFQTTELILFLFAVLALLSKEQG
ICALPLCAIYDIWVRNELGIVSVGRIILFPGNTAEKYRNLCIRVRTIILSTLILILLRIL
PTVLYQTGDHYSPSFSSSDNPASASNSVLTRTLTFHYLLAFNAWLLSFPSTLSYDWSMDS
IPLIETVWDSRNLFTIALYLVLTTISLRIVKTLGNRDEKFSLMWSVVSENKRQAQSSRKS
RKTKRNVSPHCELTTTLQLPNLTTHVPPGTKLIFKLDEGIETETACLDQRHKNANIYNKY
DIISECKPSLRSEESVLDVNTGTIWLPCSFSKNSPSIDNLDRTLNSIHHHGQLFPLEKES
QERTNSSGYATDNSLDAQEEISCQKYDLGNCHSKFLHQSGINYETGSFCSDSSFETLPEI
EEKHDSSTALTGHIPQNYDIMIMGLAMMIISFLPATNLFFYVGFVVAERLLYMPSMGYCI
LIVQGTWFLFMSSGTNKHRIYKKFATAIILLPLLVSAAKTITRNADWKNEYTLYRSGVTV
NPAKSWANLGNVLKVSNKIAEAEFAYLKALNTRSNMADVHYNLGLLYQEQKRYDDALERY
NKAILYRPTLAVAHLNRGIVLAALRRSHDAETKIANSTVLVARAIITCFRFWLRLKSSRR
KVFSKLYSLLREAIYCISQMTSSDIA
Nucleotide sequence
Length: 2,781
>Harore.CG.MTP2014.S36.g09293.01.t
ATGAATTATCAAGTTGAAGTTCTATGTTTCTTCGTGGCTGTGATCGCGTACATCAATACT
TTTCAAGCCGAATTCGTCTACGACGACAATCGTGCGATACTGAAGAATGTCGATATCCGT
CCGACCATGCCACTGTACAAAGTCTTCATACACGATTTTTGGGGAACACCGATGATCCAT
TCGGGAAGTCACAAGTCTTATAGACCCATCACTGTGCTTACCTTCAGATTAAACTACGTT
ATATCCGGACTCCAGCCGTGGTCTTATCACGTAACAAATACCATGCTCCACGCATTTACA
ACGTGGTTGTTTGTCACTTTCACGAGGACGAGAATCTTTGTTGCAAAGTCGAAGGACCAG
TACGATTCCAGGTCCCTAATCTCTGGTACGTATTTAGGTCTCATCTTTGCGTTACATCCT
ATTCATACTGAAGCAGTTGCCGGTCTAGTTGGACGAGCAGACGTGTTAGCAACTTTGTTC
ACTTTAGCAGCTCTGATTTCTTACGCGCGTATTTGTGACCTGAGCAACAGAGTCTTAAGT
GATTCAGCGCGACACCGAAACGAATCGTTACAAACAACGAGGCGAGACTTCTCGGCAACA
TTTTGTAGCAAAAATAATCCTGTCAAAACCAATGCCAGGAAGCGGAGGAACCCCAATAAA
TCCCTTTTTCGGTCGAAACAAAACTCAATGTCGGAATACCCGGACAAATGTTCTAAAACA
AGAAGAAAAACCAAACGTATTATTAACTCTAACGTTGGTTCCGAACCATTTGAGGCCAGT
TTGTCTGCTCAAGATGCAGATTCGGCATGTCGATTGAACAACCCGAATATATTATTTCAA
ACAACCGAACTAATTCTGTTCCTGTTCGCTGTACTGGCTCTACTCAGTAAGGAACAGGGT
ATCTGTGCCTTACCACTATGCGCAATCTATGACATCTGGGTGAGAAATGAACTGGGTATC
GTCTCAGTTGGCCGCATCATACTTTTTCCGGGTAACACTGCAGAAAAGTATCGGAACCTC
TGCATTCGCGTACGGACGATTATTCTATCGACGCTTATTCTCATTCTACTTCGAATATTA
CCCACTGTGTTGTACCAAACTGGGGATCATTATTCACCCTCGTTTTCATCTTCAGATAAT
CCCGCGTCTGCCTCCAACTCAGTATTAACTCGAACTTTGACCTTCCACTATTTGTTAGCT
TTCAATGCATGGTTACTGAGCTTCCCATCTACTCTCAGTTACGATTGGAGTATGGACAGC
ATTCCGCTGATTGAAACCGTTTGGGATTCCCGCAATCTCTTCACTATAGCATTGTATCTG
GTACTCACAACAATCTCTTTACGTATTGTCAAAACACTTGGAAATCGGGATGAGAAGTTC
TCCCTGATGTGGTCAGTGGTTAGCGAAAACAAAAGACAGGCTCAGAGTAGCAGAAAAAGT
AGAAAAACGAAACGAAATGTATCACCCCACTGTGAATTAACCACCACCCTTCAGTTGCCG
AATCTTACGACACACGTTCCACCTGGAACCAAACTAATATTCAAACTTGATGAAGGCATA
GAAACTGAAACAGCCTGTCTCGATCAAAGACATAAGAACGCCAACATTTATAATAAATAT
GACATAATTAGTGAATGCAAACCAAGTTTGCGTTCAGAGGAATCAGTCCTTGATGTTAAT
ACTGGAACAATATGGCTGCCATGCAGCTTCAGTAAAAATTCACCATCTATTGACAACCTC
GATCGGACTCTTAACAGTATCCATCATCATGGCCAATTGTTTCCCTTGGAAAAAGAAAGC
CAAGAGCGGACAAACAGTTCGGGATATGCCACTGACAACAGTCTCGATGCTCAGGAAGAA
ATATCATGCCAGAAATATGATCTCGGGAACTGTCATTCGAAGTTTTTACACCAGTCTGGA
ATCAATTATGAAACTGGTTCGTTCTGCTCGGATTCGTCGTTCGAAACATTACCCGAAATC
GAAGAAAAACACGATAGCTCAACGGCGTTGACCGGACATATACCCCAAAACTATGACATC
ATGATAATGGGTTTGGCTATGATGATTATCTCATTCCTGCCGGCAACCAATCTATTTTTT
TACGTCGGGTTCGTCGTTGCTGAAAGATTACTCTATATGCCAAGCATGGGATATTGCATT
CTCATCGTGCAAGGCACCTGGTTTCTTTTTATGTCCTCCGGAACCAATAAACATAGAATC
TACAAGAAATTTGCAACTGCAATAATTCTTCTACCTCTTCTTGTCTCCGCTGCTAAAACA
ATCACGAGAAATGCAGACTGGAAGAACGAGTATACATTGTACAGATCTGGTGTGACTGTG
AATCCAGCAAAATCGTGGGCAAATCTAGGAAATGTATTGAAAGTTAGCAACAAGATAGCT
GAAGCCGAATTCGCGTATTTAAAGGCCCTGAACACAAGGAGTAATATGGCAGATGTGCAC
TATAATCTAGGACTGTTGTATCAAGAGCAAAAACGTTACGATGACGCTCTTGAAAGATAC
AACAAAGCAATTCTCTACAGACCAACTCTTGCCGTTGCCCACCTCAATCGTGGAATTGTC
CTTGCTGCTCTACGGCGTTCGCATGATGCTGAAACTAAAATTGCTAATTCTACAGTGCTA
GTGGCCCGAGCAATTATTACATGCTTTCGTTTTTGGTTGCGTTTAAAATCTTCTCGGAGA
AAAGTTTTTTCAAAACTCTATAGTCTCTTGCGGGAAGCTATCTATTGTATATCGCAGATG
ACATCGAGCGACATTGCTTAA
| Pfam |
DUF1736 (IPR013618) - T[372-442] 5.4E-30 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[769-880] 4.5E-20 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[781-873] 5.06E-22 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[783-884] 18.861 |
| SMART |
TPR_repeat (IPR019734) - T[783-816] 0.036 - T[817-850] 5.6E-7 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[783-816] 7.198 - T[817-850] 12.272 |
| Pfam |
TPR_1 (IPR001440) - T[817-849] 3.6E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMTC1_HUMAN | 45.062 % | 131 | 4.26E-31 |
| TMTC2_HUMAN | 48.889 % | 205 | 4.56E-55 |
| TMTC3_HUMAN | 45.614 % | 153 | 5.33E-38 |