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TRANSCRIPT CARD

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  1. EST 'BW431050' > 
  2. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S36.g01332.01.t

Possible name(s)

MPDU1; PQLC3

Gene model

Harore.CG.MTP2014.S36.g01332

Location

S36 [408,606 / 411,849]

Sequences

Amino acid sequence

Length: 242

>Harore.CG.MTP2014.S36.g01332.01.p
MELFKSASTLVMSEKCYETFFVDFNFFHADCLKMVISKVLGYSIILGAILVKVPQIQKIV
KASSAIGISFTSLLLELHAITSMLSYSIARSFPFSTWGDSFFLMVQVVILGALINYYKGK
SGLAVIFVLIYAIILYVLISGLTPISVLSALQASNMPAIVIAKLIQAAENIKNGHTGHLS
AITVYLTFIGSAARIFTSIQETGDMLVIATYIVSTTANGVIAFQIYWYWTATEKFIEKQK
KD

Nucleotide sequence

Length: 2,969

>Harore.CG.MTP2014.S36.g01332.01.t
GAGAAAACCTCGTGATGTGATTCGAACCATACATTTGAACTCTTAACCCTTTTGATTACG
TAGGCCGAACGGAACGAAAAGGTGGCAGCAAAGAATAATAATACAACAATAATATACTCC
TATACTGGGCAGCTAAGTGCGCTAAGTACTACACCTTAATACAATTTACTAGCAGAAGAT
TTGCTTTACAAATTGTGTACAGTTAGTTTTCATCACGGGTATAGTCATATTTCTGTGTCA
TTACAATGGAGTTATTCAAAAGTGCTTCTACACTCGTCATGTCAGAGAAATGCTACGAGA
CTTTTTTCGTGGACTTCAATTTCTTCCACGCTGATTGTTTGAAGATGGTCATTAGCAAGG
TGCTTGGTTATTCCATTATACTCGGAGCAATATTGGTGAAAGTTCCGCAGATACAAAAGA
TCGTTAAAGCAAGCAGCGCGATTGGAATCAGCTTTACCTCGTTGTTGTTAGAACTGCATG
CAATTACTTCCATGTTGTCTTACAGTATTGCACGGAGCTTTCCTTTCAGCACTTGGGGAG
ATTCTTTCTTTCTTATGGTGCAAGTAGTCATCCTAGGGGCTCTGATTAATTATTACAAGG
GAAAGTCTGGTTTAGCTGTAATTTTTGTCCTCATTTATGCAATCATCCTGTATGTTTTGA
TATCTGGACTCACTCCCATATCTGTTCTGTCAGCATTACAAGCCAGCAACATGCCAGCTA
TTGTGATAGCCAAACTCATACAGGCAGCCGAAAACATAAAAAACGGACACACCGGTCACT
TGTCAGCAATCACTGTCTACCTGACTTTCATCGGTTCTGCAGCACGCATATTTACTTCGA
TCCAAGAGACCGGTGATATGCTTGTAATAGCCACCTACATAGTTTCTACCACTGCAAACG
GTGTGATCGCATTTCAAATCTACTGGTACTGGACAGCAACTGAAAAGTTTATAGAAAAGC
AAAAAAAAGACTAAAACACTAATAGAAATAATCAATCATGCAGTACTTTATTATGCAAGT
GATTATGAATTTGATGAAAAGAAGTATATTTAGATTGATGTATTATTTACATCCTTCGCA
AATCCTTTTTCATGTAACTTCTGTATTCCTGTTATTAATATAGAACAGGTGGTGAGCACA
AAATAATGTGATACAGATATTTGAATTACAGAAATATTGGCTTGATCCACTGTCTGATTT
TTAAGGTTAGCTTTAAATTGATGTGAAAAATACTATATGTATCTCAAAAGCATGTAATAT
ACAATCAATGTACACCCTATCATAGGTTTGCCTTTAAGTTTATCAAACTACACCACTATC
TCAATTTACAAGCGAGACCCATTCTTGAAACTTGCTCGTAAATTTGTTAATCAAAGCTCA
TTGTTATGGTATGGGCACCAACAGCTACTAGTTATTCATTATTTCATGAAAAATAGTTGA
CACTGTTCATTCTTGGTCTCATCCAGTAATGAAACACTCTACTGGGATTAGGGTTGAGCC
CCATGAGCTAGAGTTTAAGTATTATTTGATAGTCACAAACTTATTCAGATTAAGGAGCAA
AATTATCATATTCTCCAATTCTTGTAAATCGAGGAAATGGTGAACATATTTTTTTTTGTT
GCTTGCATACCCATTTTGTAATCGAATTATAACATATTCATAAACCATAGAACTTGTTAC
TAAATAAATGGTTTGTTTATTAGGTAAACCATATGTTATTTAGATATGGCTTCCTCTTCT
GATCAAAATTTGGCTGACCTAGACCAACAGCTCATGAGTTTTGAGAAACTGGACAGGGCA
TCCCCAGACCTGTGGCCGGAGCAGATGTCGAGCGTATCAGAATTTATGTCTGCACTGAAG
AGCCCCATATCACCACATTCTCCTCCCAAATGGATGGCCGAACTCGAGAAAGATGACATT
GATATGTTGCAAGAATTTGGAAGCTTGACCACAGCTAACCTACTCGAAAAAGTCAGAGGA
CTACAAAATTTGGCCTACCAGCTTGGACTGGACGAGTCCAGGGAAATGACCAGAGGAAAG
TTTTTGAATATTTTGGACAACGCAAACCAGTCGGGTTGATAACTTGATAACAAAATGCAA
CCAAATGCCATGTGGCAGCTGTGAACAATGCAACAACAATCAGAATGCTAAGCTAGATAT
CTGTAACCATTATTCTGTAATGGTGTTTTTGACATTTTATATTACATATACAGTATAAGC
ATTTTGTCGTATGCAAAGTTTTTATAAATATGGTTTGTGGTGGTGTAGTAATATTCTAGT
TATGACACTACTAACTTATGAAATGTTTTATCAATATAAAAATAAATTATTACTAGAACA
TTATCTGTTACAATGAGATGGCACTCCACTGACCATGTAGTAAATTAATTCTGAAGGATA
TAATCATGAAAGCCATTGTGCAACGAGTTACAAAAGCGAGTGTAACTGTCGGTGAAGAGA
CCGTTGGGTCAATTGGAAAAGGAATCTGTGTTCTGCTGGGAATATCCAAACATGACACAA
CAAAGGAAATGGAATACATAGTTCGGAAGGTGCTGAATTTAAGAATATTCGAAGATGACA
ACAACAAAAGATGGATGAAGAGTGTAAAGGATAAAGAATATGAAGTATTGTGTGTCAGCC
AGTTCACACTTCAATGTGTCCTGAAAGGAAACAAGCCTGACTTTCATCTCGCAATGTCAG
CTGACAAATCGGAGGAATTCTATAACACGACATTGGACTGCATGAGGAAAAACTACAACA
CCGAGAAAGTCAAAGATGGCAGATTTGGAGCTTACATGCAAGTGCATATACAGAATGATG
GACCCGTAACCATAGAAATCAACTCTCTGCCGCCAAGTTCCGACAAGCAATCGGAAGGGA
AATAACCAACGACCAAAGAATGAATAACATCAATAGCAATAAATGCAACTTACTTCATGA
ATAAACACAATAAAACGTGCATGAAAAAT

InterProScan

PIRSF
MannP-dilichol_defect-1 (IPR016817) - T[1-242] 5.9E-77
PANTHER
MannP-dilichol_defect-1 (IPR016817) - T[2-241] 1.9E-87
Pfam
PQ-loop_rpt (IPR006603) - T[36-95] 1.3E-11 - T[160-201] 4.1E-5
SMART
PQ-loop_rpt (IPR006603) - T[50-81] 0.012 - T[161-192] 0.64

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MPU1_HUMAN 50.862 % 228 3.06E-75