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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S36.g00060.01.t

Possible name(s)

MPDU1; PQLC3

Gene model

Harore.CG.MTP2014.S36.g00060

Location

S36 [408,851 / 409,580]

Sequences

Amino acid sequence

Length: 242

>Harore.CG.MTP2014.S36.g00060.01.p
MELFKSASTLVMSEKCYETFFVDFNFFHADCLKMVISKVLGYSIILGAILVKVPQIQKIV
KASSAIGISFTSLLLELHAITSMLSYSIARSFPFSTWGDSFFLMVQVVILGALINYYKGK
SGLAVIFVLIYAIILYVLISGLTPISVLSALQASNMPAIVIAKLIQAAENIKNGHTGHLS
AITVYLTFIGSAARIFTSIQETGDMLVIATYIVSTTANGVIAFQIYWYWTATEKFIEKQK
KD

Nucleotide sequence

Length: 729

>Harore.CG.MTP2014.S36.g00060.01.t
ATGGAGTTATTCAAAAGTGCTTCTACACTCGTCATGTCAGAGAAATGCTACGAGACTTTT
TTCGTGGACTTCAATTTCTTCCACGCTGATTGTTTGAAGATGGTCATTAGCAAGGTGCTT
GGTTATTCCATTATACTCGGAGCAATATTGGTGAAAGTTCCGCAGATACAAAAGATCGTT
AAAGCAAGCAGCGCGATTGGAATCAGCTTTACCTCGTTGTTGTTAGAACTGCATGCAATT
ACTTCCATGTTGTCTTACAGTATTGCACGGAGCTTTCCTTTCAGCACTTGGGGAGATTCT
TTCTTTCTTATGGTGCAAGTAGTCATCCTAGGGGCTCTGATTAATTATTACAAGGGAAAG
TCTGGTTTAGCTGTAATTTTTGTCCTCATTTATGCAATCATCCTGTATGTTTTGATATCT
GGACTCACTCCCATATCTGTTCTGTCAGCATTACAAGCCAGCAACATGCCAGCTATTGTG
ATAGCCAAACTCATACAGGCAGCCGAAAACATAAAAAACGGACACACCGGTCACTTGTCA
GCAATCACTGTCTACCTGACTTTCATCGGTTCTGCAGCACGCATATTTACTTCGATCCAA
GAGACCGGTGATATGCTTGTAATAGCCACCTACATAGTTTCTACCACTGCAAACGGTGTG
ATCGCATTTCAAATCTACTGGTACTGGACAGCAACTGAAAAGTTTATAGAAAAGCAAAAA
AAAGACTAA

InterProScan

PIRSF
MannP-dilichol_defect-1 (IPR016817) - T[1-242] 5.9E-77
PANTHER
MannP-dilichol_defect-1 (IPR016817) - T[2-241] 1.9E-87
Pfam
PQ-loop_rpt (IPR006603) - T[36-95] 1.3E-11 - T[160-201] 4.1E-5
SMART
PQ-loop_rpt (IPR006603) - T[50-81] 0.012 - T[161-192] 0.64

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MPU1_HUMAN 50.862 % 228 3.06E-75