- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S361.g12156.01.t
Possible name(s)
GAR1
Gene model
Location
S361 [9,000 / 9,588]
Amino acid sequence
Length: 195
>Harore.CG.MTP2014.S361.g12156.01.p
MSFRGGRGRGGRGGFRGGRGGFRGGRGGGNFNRYNDEPPDCVVQLGTVMHPCQDDLVCKC
TNEKVPYFNAPLYLENKSRIGKVDEIFGQIREFCFSVKLSDNMKAESFSKDTKFFIDPMK
LLPLQRFLPQPPGSIKKGGRGRGRGGARGGFRGGRGGFGGRGGFGGRGGSRGGFRGGSRG
GFRGGRGGGRGFRGR
Nucleotide sequence
Length: 588
>Harore.CG.MTP2014.S361.g12156.01.t
ATGTCATTTCGTGGAGGAAGGGGGCGTGGTGGACGCGGCGGATTTCGAGGAGGTCGTGGT
GGGTTCCGAGGCGGACGGGGAGGTGGAAATTTTAATCGTTACAACGACGAACCTCCGGAT
TGTGTTGTACAACTTGGCACTGTCATGCATCCGTGTCAAGACGATCTGGTTTGCAAATGC
ACAAATGAAAAAGTGCCATACTTCAATGCCCCACTCTATTTAGAAAATAAATCTCGTATC
GGCAAAGTGGATGAAATATTTGGGCAAATAAGAGAATTTTGCTTCTCTGTGAAGCTTTCA
GATAACATGAAGGCAGAATCATTTTCAAAGGATACCAAATTTTTCATAGACCCGATGAAG
CTCTTACCACTTCAGAGATTCCTTCCACAACCACCCGGCTCGATTAAAAAAGGTGGCAGA
GGACGGGGTCGAGGCGGCGCAAGAGGAGGGTTTAGGGGAGGTCGTGGTGGATTCGGAGGA
CGTGGTGGATTCGGAGGAAGAGGAGGCAGCAGAGGAGGATTTAGAGGTGGCAGCAGAGGA
GGATTTAGAGGTGGCAGAGGAGGCGGGAGAGGTTTCAGGGGCCGCTGA
| PANTHER |
H/ACA_rnp_Gar1 (IPR021154) - T[1-191] 9.1E-62 |
| Pfam |
H/ACA_rnp_Gar1/Naf1 (IPR007504) - T[27-128] 6.8E-37 |
| Gene3D |
Gar1/Naf1_Cbf5-bd_sf (IPR038664) - T[38-129] 3.9E-43 |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[43-117] 1.73E-17 |
| ProDom |
H/ACA_rnp_Gar1 (IPR021154) - T[45-120] 2.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GAR1_HUMAN | 72.727 % | 155 | 6.92E-48 |