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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S1391.2.v1...' > 
  2. Molecular Tool 'ETR>Ngn-WRPW' > 
  3. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S35.g09338.02.t

Possible name(s)

ONECUT1; ONECUT2; ONECUT3

Gene model

Harore.CG.MTP2014.S35.g09338

Location

S35 [395,110 / 397,591]

Sequences

Amino acid sequence

Length: 610

>Harore.CG.MTP2014.S35.g09338.02.p
MKIAFIVDYIEVIDRKVYWKDLERLVGKTSTNISPLKSEEFLMNTDLISMPVSIGLRAVP
SAVLANAVAAAGGYAASSDFDNAEEYGLLPYYQHHQNHLYHHSVTAPPISSFSQYHPYSS
SHHFQNSAMGNNNRIESITTLNLSGSDDGSGCDIAVPASSCSGGDHMRRDETTFTSNGSS
PSALRPRSAEEDQQKSNAVENNAIQNSSNDPLGKMMEQSNTERSIAVSPSEYQQTNNNNH
SIYNENDHTVTGQHSYPRADTTHSHAHHLAMSRNSFGVPSSSLNLINNPTSIPDGLYSTE
TSLSAALQKSTFGMPTGTTCGNTDGPGLSYATLTPLQPLPSISTASEKYGVPPNGGFINP
HDVSGIGDIAGNYQKMTGMGQSLPPLSNHMLINGLNVQHGLQPSPVVPTETEAVETSIAS
VCPMGIPQYARSPTNFPSSHPYEPHMLDHCLDTFSQNQIPSSVFSARPGGFNHHGHSFNN
ARSPGMSHSRENKIPVGTGRLTPANLNGGSQHQQPTEEVNTKEVAAKITQELKRYSIPQA
IFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAGRPFS
CYEVKYVLVM

Nucleotide sequence

Length: 1,833

>Harore.CG.MTP2014.S35.g09338.02.t
ATGAAAATTGCCTTCATAGTTGATTACATCGAGGTGATCGATAGGAAAGTATACTGGAAA
GACTTAGAACGATTAGTCGGGAAAACTAGTACAAATATTTCACCATTGAAAAGTGAGGAG
TTTTTAATGAACACAGACTTAATATCCATGCCCGTCTCGATCGGATTGCGTGCCGTACCT
TCGGCGGTACTGGCAAACGCGGTGGCGGCTGCCGGCGGTTACGCGGCGAGCAGTGATTTT
GACAACGCTGAAGAATATGGGCTTTTGCCTTACTACCAACACCATCAAAACCATCTTTAT
CATCACTCCGTTACAGCTCCGCCCATATCATCCTTTTCCCAATATCACCCATACTCTTCA
AGTCACCATTTTCAGAACTCGGCAATGGGAAACAACAATCGAATAGAGTCGATAACTACT
TTGAATTTATCAGGTAGCGACGATGGGAGTGGTTGCGATATCGCAGTGCCAGCGTCAAGT
TGCAGTGGCGGAGATCATATGAGAAGAGACGAAACTACATTTACCAGTAACGGAAGCAGT
CCTTCGGCGCTGCGCCCCCGTTCGGCGGAAGAAGACCAACAAAAAAGTAACGCGGTAGAA
AATAATGCCATTCAAAATTCGTCCAACGATCCACTAGGAAAAATGATGGAACAATCCAAT
ACCGAAAGGTCGATTGCCGTTTCACCGTCAGAATATCAACAGACCAATAACAACAACCAT
TCAATTTATAACGAAAATGATCACACAGTGACCGGACAACATTCATATCCGCGTGCAGAC
ACAACACATTCCCATGCTCATCACTTGGCGATGTCCCGAAACTCCTTCGGAGTACCTTCA
TCATCCCTCAATTTAATTAATAATCCGACTTCCATTCCAGACGGCCTGTATTCCACTGAA
ACTTCTTTATCAGCAGCGTTACAAAAATCCACATTTGGAATGCCCACTGGGACCACATGC
GGGAACACAGACGGTCCCGGACTCAGTTATGCCACCTTAACGCCTCTGCAACCCCTTCCG
TCTATTTCGACAGCTTCCGAAAAGTACGGGGTTCCTCCCAATGGAGGTTTTATCAATCCC
CACGATGTGTCCGGAATCGGGGACATTGCTGGAAATTACCAAAAGATGACCGGGATGGGA
CAAAGTCTACCACCTCTCTCAAACCATATGCTTATCAACGGACTCAATGTCCAACACGGT
CTACAGCCCAGTCCCGTTGTCCCAACCGAGACAGAAGCAGTAGAAACCAGCATCGCGAGT
GTTTGTCCAATGGGCATTCCGCAGTACGCAAGATCACCCACAAACTTCCCGTCCTCCCAT
CCATATGAGCCCCATATGCTCGACCATTGTCTTGACACTTTTTCCCAAAATCAAATTCCA
TCCTCGGTGTTCTCTGCCAGACCAGGCGGATTTAATCACCACGGTCACAGTTTTAATAAT
GCCCGATCGCCCGGAATGTCTCATTCGCGTGAAAACAAAATCCCTGTGGGAACAGGACGT
CTTACGCCCGCCAATCTTAATGGCGGAAGTCAACACCAACAACCTACGGAAGAGGTCAAT
ACGAAAGAGGTGGCGGCGAAAATAACTCAAGAACTAAAACGATACAGCATCCCGCAAGCC
ATCTTTGCTCAAAGAGTACTATGCCGCAGCCAGGGTACACTATCCGATCTGCTGAGAAAT
CCCAAGCCGTGGTCGAAATTAAAAAGTGGACGGGAAACATTCAGGAGAATGTGGAAATGG
CTTCAAGAACCGGAATTCCAGAGAATGTCTGCTTTGAGATTAGCAGGTAGGCCTTTTTCC
TGTTATGAAGTGAAGTATGTGCTTGTCATGTGA

InterProScan

ProSiteProfiles
CUT_dom (IPR003350) - T[510-596] 29.628
SMART
CUT_dom (IPR003350) - T[511-596] 9.6E-43
SUPERFAMILY
Lambda_DNA-bd_dom_sf (IPR010982) - T[514-594] 9.64E-35
Pfam
CUT_dom (IPR003350) - T[517-591] 3.0E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ONEC2_HUMAN 42.773 % 187 2.46E-52
HNF6_HUMAN 68.992 % 169 4.2E-46
ONEC3_HUMAN 92.5 % 164 3.59E-44