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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S97...'
  2. Transcript 'KH2012:KH.C8.477.v1....'
  3. Transcript 'Phmamm.CG.MTP2014.S3...'
  4. Transcript 'KH2012:KH.S1171.1.v2...'
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S35.g05771.01.t

Possible name(s)

TUBB; TUBB2B; TUBB4B

Location

S35 [418,924 / 420,578]

Sequences

Amino acid sequence

Length: 448

>Harore.CG.MTP2014.S35.g05771.01.p
MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVMDVI
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLVSKIKEEYPDRMMNTFSVVPSPKVSDTVV
EPYNATLSAHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTSQMFDSKNMM
AACDPRHGRYLTVACLFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEEDEDQEAE

Nucleotide sequence

Length: 1,347

>Harore.CG.MTP2014.S35.g05771.01.t
ATGCGTGAAATAGTTCATTTACAAGCGGGCCAATGTGGAAATCAAATTGGTTCGAAGTTT
TGGGAAGTCATATCTGACGAGCATGGAATTGATCCCACCGGTACATACCACGGAGACAGC
GATCTACAACTCGAAAGAATCAACGTCTACTACAACGAAGCTACTGGAGGAAAATATGTT
CCCCGTGCCGTTCTCGTCGATCTTGAGCCAGGAACAATGGATTCCGTAAGATCTGGACCG
TTTGGGCAAATCTTCCGTCCGGATAACTTTGTTTTTGGACAAAGTGGCGCTGGTAATAAC
TGGGCGAAAGGCCATTACACGGAAGGAGCCGAATTAGTCGACTCCGTTATGGACGTCATA
AGAAAAGAGGCAGAGGGATGCGACTGTCTCCAGGGGTTTCAACTCACGCATTCATTGGGA
GGAGGCACAGGATCTGGTATGGGAACCCTGCTCGTCAGTAAAATCAAAGAAGAATATCCC
GACAGAATGATGAACACTTTTAGCGTCGTGCCGTCTCCCAAAGTATCCGATACCGTGGTA
GAACCTTACAATGCAACTCTTTCGGCCCATCAATTGGTAGAAAATACCGATGAAACCTAC
TGTATTGACAACGAAGCACTGTACGACATCTGCTTCCGGACTCTGAAGCTTACGACGCCG
ACATATGGGGATTTGAACCATCTCGTTTCAGCTACGATGAGCGGCGTAACGACATGTCTC
CGTTTCCCAGGACAACTGAACGCCGATCTTCGTAAACTCGCTGTAAACATGGTCCCCTTC
CCCCGTCTTCACTTCTTCATACCCGGATTTGCTCCCCTTACCAGCAGAGGTAGTCAGCAA
TACCGAGCCTTGACCGTTCCTGAATTGACCTCACAGATGTTCGATTCTAAAAACATGATG
GCTGCTTGCGATCCTCGACATGGACGATATCTCACAGTCGCATGTTTGTTCCGTGGTCGC
ATGTCGATGAAGGAAGTTGATGAGCAAATGCTGAACGTGCAAAACAAAAACAGCTCTTAC
TTTGTCGAATGGATTCCAAACAATGTGAAGACGGCAGTGTGTGATATCCCACCCCGTGGA
TTGAAAATGTCTTCAACTTTCATTGGGAACAGTACAGCTATTCAGGAGCTGTTCAAACGC
ATTTCGGAGCAGTTCACTTCTATGTTCCGTCGTAAAGCGTTTTTGCATTGGTACACTGGA
GAGGGTATGGATGAGATGGAATTCACAGAAGCCGAAAGCAACATGAACGACTTGGTCAGT
GAATATCAGCAATACCAGGATGCAACTGCCGAAGAGGAAGGAGAGTTTGACGAGGAGGAA
GAAGATGAGGATCAGGAAGCAGAATAG

InterProScan

ProSitePatterns
Beta-tubulin_BS (IPR013838) - T[1-4] .
Gene3D
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 8.6E-128
SUPERFAMILY
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 8.11E-103
Pfam
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 2.6E-69
PRINTS
Tubulin (IPR000217) - T[10-30] 1.8E-104 - T[51-70] 1.8E-104 - T[93-104] 1.8E-104 - T[106-130] 1.8E-104 - T[132-150] 1.8E-104 - T[151-172] 1.8E-104 - T[176-189] 1.8E-104 - T[190-210] 1.8E-104 - T[370-398] 1.8E-104
PANTHER
Tubulin (IPR000217) - T[12-445] 0.0
PANTHER
Beta_tubulin (IPR002453) - T[12-445] 0.0
PRINTS
Beta_tubulin (IPR002453) - T[41-58] 2.5E-121 - T[88-99] 2.5E-121 - T[108-126] 2.5E-121 - T[152-164] 2.5E-121 - T[212-224] 2.5E-121 - T[230-239] 2.5E-121 - T[245-258] 2.5E-121 - T[265-281] 2.5E-121 - T[311-329] 2.5E-121 - T[329-343] 2.5E-121 - T[347-370] 2.5E-121 - T[377-388] 2.5E-121 - T[412-430] 2.5E-121
SMART
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 1.7E-70
ProSitePatterns
Tubulin_CS (IPR017975) - T[140-146] .
SUPERFAMILY
Tub_FtsZ_C (IPR008280) - T[244-429] 2.17E-83
SMART
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 4.2E-48
Pfam
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 9.0E-42
Gene3D
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 7.5E-56
Gene3D
Tubulin_C (IPR023123) - T[374-445] 6.3E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBB4B_HUMAN 96.487 % 852 0
TBB2B_HUMAN 95.349 % 852 0
TBB5_HUMAN 95.105 % 847 0