- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.S1171.1.v2...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S35.g05771.01.t
Possible name(s)
TUBB; TUBB2B; TUBB4B
Gene model
Location
S35 [418,924 / 420,578]
Amino acid sequence
Length: 448
>Harore.CG.MTP2014.S35.g05771.01.p
MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVMDVI
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLVSKIKEEYPDRMMNTFSVVPSPKVSDTVV
EPYNATLSAHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTSQMFDSKNMM
AACDPRHGRYLTVACLFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEEDEDQEAE
Nucleotide sequence
Length: 1,347
>Harore.CG.MTP2014.S35.g05771.01.t
ATGCGTGAAATAGTTCATTTACAAGCGGGCCAATGTGGAAATCAAATTGGTTCGAAGTTT
TGGGAAGTCATATCTGACGAGCATGGAATTGATCCCACCGGTACATACCACGGAGACAGC
GATCTACAACTCGAAAGAATCAACGTCTACTACAACGAAGCTACTGGAGGAAAATATGTT
CCCCGTGCCGTTCTCGTCGATCTTGAGCCAGGAACAATGGATTCCGTAAGATCTGGACCG
TTTGGGCAAATCTTCCGTCCGGATAACTTTGTTTTTGGACAAAGTGGCGCTGGTAATAAC
TGGGCGAAAGGCCATTACACGGAAGGAGCCGAATTAGTCGACTCCGTTATGGACGTCATA
AGAAAAGAGGCAGAGGGATGCGACTGTCTCCAGGGGTTTCAACTCACGCATTCATTGGGA
GGAGGCACAGGATCTGGTATGGGAACCCTGCTCGTCAGTAAAATCAAAGAAGAATATCCC
GACAGAATGATGAACACTTTTAGCGTCGTGCCGTCTCCCAAAGTATCCGATACCGTGGTA
GAACCTTACAATGCAACTCTTTCGGCCCATCAATTGGTAGAAAATACCGATGAAACCTAC
TGTATTGACAACGAAGCACTGTACGACATCTGCTTCCGGACTCTGAAGCTTACGACGCCG
ACATATGGGGATTTGAACCATCTCGTTTCAGCTACGATGAGCGGCGTAACGACATGTCTC
CGTTTCCCAGGACAACTGAACGCCGATCTTCGTAAACTCGCTGTAAACATGGTCCCCTTC
CCCCGTCTTCACTTCTTCATACCCGGATTTGCTCCCCTTACCAGCAGAGGTAGTCAGCAA
TACCGAGCCTTGACCGTTCCTGAATTGACCTCACAGATGTTCGATTCTAAAAACATGATG
GCTGCTTGCGATCCTCGACATGGACGATATCTCACAGTCGCATGTTTGTTCCGTGGTCGC
ATGTCGATGAAGGAAGTTGATGAGCAAATGCTGAACGTGCAAAACAAAAACAGCTCTTAC
TTTGTCGAATGGATTCCAAACAATGTGAAGACGGCAGTGTGTGATATCCCACCCCGTGGA
TTGAAAATGTCTTCAACTTTCATTGGGAACAGTACAGCTATTCAGGAGCTGTTCAAACGC
ATTTCGGAGCAGTTCACTTCTATGTTCCGTCGTAAAGCGTTTTTGCATTGGTACACTGGA
GAGGGTATGGATGAGATGGAATTCACAGAAGCCGAAAGCAACATGAACGACTTGGTCAGT
GAATATCAGCAATACCAGGATGCAACTGCCGAAGAGGAAGGAGAGTTTGACGAGGAGGAA
GAAGATGAGGATCAGGAAGCAGAATAG
| ProSitePatterns |
Beta-tubulin_BS (IPR013838) - T[1-4] . |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 8.6E-128 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 8.11E-103 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 2.6E-69 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 1.8E-104 - T[51-70] 1.8E-104 - T[93-104] 1.8E-104 - T[106-130] 1.8E-104 - T[132-150] 1.8E-104 - T[151-172] 1.8E-104 - T[176-189] 1.8E-104 - T[190-210] 1.8E-104 - T[370-398] 1.8E-104 |
| PANTHER |
Tubulin (IPR000217) - T[12-445] 0.0 |
| PANTHER |
Beta_tubulin (IPR002453) - T[12-445] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[41-58] 2.5E-121 - T[88-99] 2.5E-121 - T[108-126] 2.5E-121 - T[152-164] 2.5E-121 - T[212-224] 2.5E-121 - T[230-239] 2.5E-121 - T[245-258] 2.5E-121 - T[265-281] 2.5E-121 - T[311-329] 2.5E-121 - T[329-343] 2.5E-121 - T[347-370] 2.5E-121 - T[377-388] 2.5E-121 - T[412-430] 2.5E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 1.7E-70 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[140-146] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[244-429] 2.17E-83 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 4.2E-48 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 9.0E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 7.5E-56 |
| Gene3D |
Tubulin_C (IPR023123) - T[374-445] 6.3E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 96.487 % | 852 | 0 |
| TBB2B_HUMAN | 95.349 % | 852 | 0 |
| TBB5_HUMAN | 95.105 % | 847 | 0 |