- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S35.g03563.01.t
Possible name(s)
CWC22; MAP1A; NOM1
Gene model
Location
S35 [250,750 / 257,037]
Amino acid sequence
Length: 804
>Harore.CG.MTP2014.S35.g03563.01.p
MMKKGKRKRPCPHVTSVMSKVFERYGYQEGSDENRKSGEIFVKGRKQKRREMKIQRQQVK
QKHFEKLSKRVKLDDKVKDKERDVNVEQSVMEQSTKRQTVKESRKITIQEKRNKKFKKEN
IQEDKIINTLEKKLFLHKRKNKSKLPKSFCDSGLDYVLNALDGGGGSSDEESAASAQGDF
FLDDKVHSKKEEIINKNHADVPSDEEEVADENLIVSDEEQEDSDGSEHLEEEDQDIQEEC
EESVNVSEEFRGDGEDSDERAESKDNADLLPAINSGKYIPPALRKMMMTDSDEKMRQLTK
KIKGLYNKLSDANLNSICNEIETIYLENSRAVTNQMISDMILEQFTESDPVPENLVMETA
MLITVLSKRIAVEVLAHFYEAISVKLHSILTKPELQYSRNEGKATNNLVQLLGCLYQLKS
TDSKVLQDIFHLLISSFAEKDIELMLDILNKVGFLLRKDDPQSLQDIMKEISVKSKECKC
DNDDGSRMSFMLNILMAVKNNNVRKVTGYDPDLITARRKRVVSLLQTKKGIANSESFPSV
ALKDFLNAEINGRWWIVGSSWSGRPMLKNQEDVRDEMKDIENSISKSVIKAAKSQRMNTD
VRKKIFYAVMTADDYIEAFEKVTKLGLKGRQLREIAYVIVNCCQQGKSFNPYFVYLLNRF
CQSDRQFIISLQCAMWDRFKLVGSLKKVQLDNIAQLLSNLIVKEAVPVSCLKAIDFAEMD
KPLVDFLRSLLCLIVENCGSIDQLKTVFSPLCSSTKFAFVRQGLQLFLGHFMLADKSFIA
AHASTEESLSAIVSVLSRSSFAVL
Nucleotide sequence
Length: 4,592
>Harore.CG.MTP2014.S35.g03563.01.t
CGTTCAGTAGTTTTATTGTAAATAGTTCGGCAGATTATTTCTTCTGCTATTTGATATCAT
TCCGAACCTTTGACGTCTTTGGCCATTATGATGAAAAAGGGAAAGCGTAAGCGGCCCTGC
CCACACGTAACATCAGTTATGAGTAAGGTGTTCGAGCGATATGGTTACCAAGAAGGCAGC
GATGAAAATCGGAAGTCGGGAGAGATCTTCGTAAAAGGAAGAAAACAGAAACGAAGAGAA
ATGAAAATCCAACGACAACAAGTGAAACAAAAACATTTTGAAAAACTGTCAAAGCGAGTT
AAATTAGACGATAAGGTTAAGGATAAGGAACGGGATGTAAATGTGGAACAATCTGTAATG
GAGCAGTCCACTAAAAGACAAACTGTGAAAGAAAGTAGGAAAATTACTATTCAAGAAAAG
CGAAATAAAAAGTTTAAGAAAGAAAATATTCAAGAAGATAAAATTATAAATACACTTGAA
AAGAAGCTGTTCTTGCACAAAAGGAAAAATAAGTCGAAATTGCCTAAATCCTTTTGCGAC
AGTGGGTTAGATTATGTTTTGAATGCTCTCGATGGTGGAGGAGGATCTAGCGATGAAGAA
TCGGCAGCTTCAGCCCAAGGGGATTTCTTCTTGGATGACAAGGTTCATTCTAAAAAGGAG
GAAATTATCAATAAGAATCATGCTGATGTACCCAGTGATGAAGAGGAAGTTGCTGATGAA
AATTTGATAGTATCTGATGAGGAACAGGAAGATTCTGATGGATCAGAACATCTTGAGGAA
GAAGATCAAGATATCCAAGAGGAATGTGAAGAATCTGTGAATGTCAGTGAGGAATTTCGA
GGTGATGGAGAGGACTCTGATGAACGAGCTGAGTCTAAAGATAATGCCGATCTGTTGCCT
GCAATAAATTCTGGCAAATACATCCCTCCTGCTCTAAGAAAGATGATGATGACAGACTCC
GATGAAAAAATGAGGCAATTGACCAAAAAGATTAAAGGACTTTACAACAAGCTTAGCGAC
GCAAATCTAAACAGTATTTGTAACGAGATTGAGACGATTTACTTAGAGAACAGTCGGGCT
GTCACGAACCAAATGATTTCCGATATGATTTTAGAACAGTTCACTGAATCGGATCCGGTT
CCAGAAAACTTGGTGATGGAGACAGCAATGCTGATCACTGTTCTTAGCAAAAGAATTGCT
GTTGAAGTTCTTGCTCATTTCTATGAAGCGATCTCTGTTAAACTACATTCGATTCTCACA
AAACCAGAACTGCAGTACTCAAGAAATGAAGGCAAGGCAACCAACAATCTTGTACAATTG
CTTGGCTGTTTGTATCAGCTCAAAAGCACGGACAGCAAGGTTCTGCAGGATATTTTTCAC
CTTCTCATTTCTTCATTTGCTGAAAAAGACATCGAACTCATGTTGGATATCCTCAATAAA
GTGGGATTCCTTTTGAGGAAGGATGATCCGCAATCCTTACAGGATATCATGAAGGAGATT
TCAGTTAAATCTAAAGAGTGCAAGTGTGACAATGATGATGGTTCCCGGATGTCATTTATG
CTGAACATATTAATGGCCGTGAAAAATAACAATGTTAGAAAAGTTACTGGTTACGATCCT
GACCTGATCACAGCTCGTAGGAAAAGGGTTGTGTCCCTGCTTCAAACTAAGAAAGGAATT
GCGAACTCTGAATCATTTCCATCCGTCGCATTGAAAGATTTTTTAAATGCTGAAATTAAT
GGTCGTTGGTGGATAGTTGGTAGTTCCTGGTCCGGCCGACCCATGCTCAAAAATCAAGAA
GATGTCAGGGATGAAATGAAGGACATCGAAAATTCTATCTCCAAGAGCGTGATTAAAGCT
GCAAAATCACAAAGAATGAACACCGACGTGAGGAAAAAAATATTTTATGCCGTAATGACC
GCTGATGATTATATCGAAGCATTTGAAAAAGTTACTAAATTGGGACTGAAGGGGAGGCAA
TTGCGTGAAATTGCTTATGTCATCGTGAACTGTTGCCAGCAAGGAAAATCATTCAATCCA
TACTTCGTTTATTTGTTGAACAGATTTTGTCAAAGTGACAGGCAGTTTATTATAAGCTTG
CAGTGTGCAATGTGGGACAGATTTAAACTTGTTGGATCTTTGAAAAAAGTACAACTCGAC
AACATCGCTCAGCTTTTGTCAAATCTGATAGTTAAGGAAGCTGTTCCAGTGTCCTGTCTC
AAGGCAATTGACTTTGCTGAAATGGACAAACCTCTGGTTGACTTCCTTCGTTCCCTGCTG
TGTTTAATTGTGGAAAATTGTGGTTCTATTGACCAACTCAAAACAGTTTTCAGTCCCTTG
TGCTCTTCCACAAAGTTCGCATTCGTTAGACAAGGCCTTCAGTTGTTCCTTGGCCATTTC
ATGTTAGCCGACAAAAGTTTTATTGCTGCGCATGCTTCTACGGAGGAGTCGCTGAGCGCT
ATAGTCAGTGTATTGAGTAGATCTAGTTTCGCAGTCCTCTAGTAATGATTACTTGCTTGT
TATGGATTGTAGATGAAGTGTTTTCAACTTGTGCAAAAATCCAATGATTCACAGAGAAAT
GGATTCTCAAAAACAGATCTAATAATTAACACAATTATTTATTTAATCAGAATTTTTTAT
CAAAACAGCAACTACCATAAGCATAGTTTTTCCTATTTTTTCCTCGCTGAACCTTTGCAT
GCATGATGATGGCCATTTACATTGGGTGCTCCAAGAACTGGTAGATAGATTGATATTGCC
ACAATGTACAAATGTTGGAAACACTGTAATGTTGTAGGACATTTGACAAAAAAAATTTAA
TTTATGGTTTACAGTACAGTACTCTTGTATGTTTTTGCAGTCGAATAATTTAAAAAAAAT
ACTTTTAATAAGTGCGTATACTAGTTGTACGAAAACTCTTAATCTCCTGTCTTCACCGTC
GTTTTCATAACTCACACTAAATGGATTTCAAATTCAACTTTCAACTGAATGAGGAAACTC
CGAATACAGAGAACGTAAGAAATGAAGCACAAGACGAGGACAAAGTAAAAGTGAATCCGT
ATCAGGAAATAACCATTGAAAAAATACAAGAAGAGTGGAATTGTGATTTTTTATTCGAAG
TTGACAGAGTGAACGTGACTGCCGATAACGCAGATTTATTGGTAGTACTTCCTCTGTCCC
AAAGTGTTGATGGCAACTCTGAAGAGAAACCGAATCCTGAAAGTGATAAAATTCCAAACT
TCGATAATAAGCAATATGATCTTGTACCAAATGTATACGAGGGAGGATTCAAAATTTGGG
AATGTACGCTCGATCTTATTTCATATATACGTGAATCAAACATCGACTTCAACCAGAAGA
AGATATTAGACCTCGGATGTGGAGTAGGATTGCTCGGAGTCTACGCTCTGACGCAATGTG
GCGCGCATCAAGTTGATTTTCAAGATTACAACCAAGAAGTTCTTCTGCGCTGTACAGGTC
CGACCGTTATCGTCAACCACGTTCGCCATGCACAGAAATCAGAACCGCTAGATATCGCAA
GCGAGTCGCCGAGTAAAAAAATGAAGTTTCCGAGTAACGCGAAATCACAAGAAAATTCAG
AAAGCAATAAAAATGAAACCGATTTTACTTCAAAACTGAATTTGGAAGACGGAACTTATG
TTGATGATATACTGAAAGGAGATTTACGAAACGAGAATTTGAACAAACGAATTTGCTTCC
GCGCCGGTGACTGGAAACACGTTCAAAAAGTAGTGGAGCAAAGGAATATCAAATACGACA
TTATTCTATCAAGCGAGACCATCTATAATCCATCGGCTTACGAAAAACTCCATAGTTTTG
TAAGTCACACTCTTAGCTCTGAGGGCACGGCTTATCTCGCAGCAAAATCACACTATTTCG
GGGTTGGTGGCGGAGTAGATAGCTGGCGAGAATACGTGCGATCGCTTGGTGTATTTGACA
TTGTAGTCACGAAGAAATACGAAGATAATTTACGGAGAAAGATTTTGAAAATGAATTTCA
AACCCTAGTTATTAAGAGCAATAAAGAATTAGCTATCGAGCAGCTGTCTTCGTGGTCATT
TATATGGTTAACACCATCAGGTCGTCTCGATTATGTACAGGCACCAGGCAGTATTCCTGG
TATTGATCGTGGTATTTTTATACTAGATCTGTAGCATTGGAGCAGTTCCTGTAATTACCA
AATTTCTATTCTCTGCAATAAGAATGTGGTTAAAATTCTAACGCTTATGAGACGTGATGT
ATATGATGTCAACAGGACATCGATTGTGAATAAATATTCAGCATGTCCGGTACGTACGCT
ATGATCCGAATTAGCAATGGATTTTATTTGTTGTTGATTATTCGTCGCATCACCGTTGCG
ATTATTGTAAGAGGTCGGTAGTATTTACACAATTATTCACTGGCAGCAGACATGCGGGTA
GGAGGGGTTACTCAAGGTCACGGGTATATATCAAACACCAAGGCAGTCTGGTTTGTCATT
CTATGTAACAATATACCGACTAACCTCCATAATTATACCTTACAAATATTTAAAGGTACA
TATATATTCATTCAAATAATACCCTAACGCCG
| Gene3D |
MIF4-like_sf (IPR016021) - T[262-547] 3.9E-46 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[293-503] 5.67E-24 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[299-502] 5.8E-12 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[300-502] 2.7E-10 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[600-716] 17.652 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[601-707] 5.4E-15 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[601-706] 9.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 35.793 % | 383 | 2.24E-120 |
