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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S57...'
  2. Transcript 'KH2012:KH.C14.232.v1...'
  3. Transcript 'Moocul.CG.ELv1_2.S10...'
  4. Transcript 'Boleac.CG.SB_v3.S41....'
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S35.g03177.01.t

Possible name(s)

TUBB2A; TUBB2B; TUBB4B

Location

S35 [414,334 / 416,684]

Sequences

Amino acid sequence

Length: 446

>Harore.CG.MTP2014.S35.g03177.01.p
MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTCSYAGDSDLQLERINVYYNEANGGKYV
PRAVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDTVMDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLVSKIREEYPDRMMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEEEEDHE

Nucleotide sequence

Length: 1,655

>Harore.CG.MTP2014.S35.g03177.01.t
ATTTTAAATTTGGAGCCGGTTTTCTAAGTTGCGTTAAAATATGCGTGAAATAGTCCATTT
ACAGGCGGGGCAATGCGGCAACCAGATCGGTTCAAAGTTTTGGGAAGTTATATCTGATGA
ACATGGAATCGATCCAACCTGTTCATATGCCGGTGACAGTGATTTACAACTGGAAAGAAT
AAATGTCTATTACAACGAAGCAAATGGAGGAAAATATGTTCCACGTGCGGTTCTCATCGA
TCTTGAGCCAGGAACAATGGATTCCGTAAGATCTGGACCATTTGGGCAAATATTCCGTCC
CGATAATTTCGTTTTTGGACAAAGTGGCGCCGGTAATAACTGGGCGAAAGGCCATTACAC
CGAAGGTGCTGAATTAGTCGACACTGTTATGGACGTTGTCAGAAAAGAGGCAGAGGGATG
TGATTGCCTTCAGGGTTTCCAGCTAACGCATTCATTAGGAGGAGGCACTGGATCTGGTAT
GGGAACGCTCCTCGTCAGTAAAATTCGTGAAGAATATCCTGATAGAATGATGAACACTTT
TAGCGTCGTGCCGTCTCCCAAAGTATCCGATACCGTAGTAGAACCTTACAATGCGACGCT
TTCCGTCCATCAATTAGTAGAAAATACCGACGAAACCTACTGTATCGACAATGAAGCACT
GTACGACATCTGCTTCCGTACTCTGAAGCTTACTACGCCGACATATGGAGATTTGAACCA
TCTCGTTTCAGCTACGATGAGTGGCGTAACTACATGTCTCCGTTTCCCAGGACAACTGAA
CGCCGATCTTCGTAAACTCGCTGTAAACATGGTCCCCTTCCCCCGTCTTCACTTCTTCAT
ACCCGGTTTTGCTCCTCTTACCAGCAGAGGTAGTCAGCAATACCGAGCCTTGACTGTTCC
TGAATTGACCCAACAGATGTTCGATTCTAAAAACATGATGGCTGCTTGTGATCCTCGTCA
TGGACGATATCTCACAGTCGCAGCAATGTTCCGTGGTCGTATGTCGATGAAGGAAGTTGA
TGAGCAAATGCTGAATGTACAAAACAAAAACAGCTCCTACTTTGTCGAATGGATTCCAAA
CAATGTGAAGACGGCAGTGTGTGATATCCCACCCCGTGGATTGAAAATGTCGGCAACTTT
CATTGGGAACAGTACAGCTATTCAGGAGCTGTTCAAACGCATCTCGGAGCAGTTCACTGC
CATGTTCCGTCGTAAAGCGTTTTTGCATTGGTACACTGGAGAGGGTATGGATGAGATGGA
ATTCACAGAGGCCGAAAGCAATATGAACGACTTGGTTAGTGAATATCAGCAATACCAGGA
TGCAACAGCCGAAGAGGAAGGAGAGTTTGACGAGGAGGAGGAAGAAGAGGATCACGAATA
AATAATCTTTTGGAAATCAATAATGAAATTTAATTAGATTTTACTCTCCTTGCCAATAAT
TAAATTCTGTTCTTCATGGTATGCAGTAAAATTCATTCTTAGTATTTAGCCTTTCTTGAC
TCTTGTCTAGAAATTATATTCCATTTGCTGTGCAATTCCTTCTTTAGCTCAGTTTGTTCC
TTGCAAAGTCCATTCTTTTCGGCAAGCTATAGCCTCGTGTCTGAATTTCCTTGGCACGAA
GTTCTCCACTATCAATAAAACCTAACTCCAACTGG

InterProScan

Gene3D
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 3.5E-126
SUPERFAMILY
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 5.63E-102
ProSitePatterns
Beta-tubulin_BS (IPR013838) - T[1-4] .
Pfam
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 2.9E-69
PRINTS
Tubulin (IPR000217) - T[10-30] 6.2E-105 - T[51-70] 6.2E-105 - T[93-104] 6.2E-105 - T[106-130] 6.2E-105 - T[132-150] 6.2E-105 - T[151-172] 6.2E-105 - T[176-189] 6.2E-105 - T[190-210] 6.2E-105 - T[370-398] 6.2E-105
PANTHER
Beta_tubulin (IPR002453) - T[12-444] 0.0
PANTHER
Tubulin (IPR000217) - T[12-444] 0.0
PRINTS
Beta_tubulin (IPR002453) - T[41-58] 1.3E-122 - T[88-99] 1.3E-122 - T[108-126] 1.3E-122 - T[152-164] 1.3E-122 - T[212-224] 1.3E-122 - T[230-239] 1.3E-122 - T[245-258] 1.3E-122 - T[265-281] 1.3E-122 - T[311-329] 1.3E-122 - T[329-343] 1.3E-122 - T[347-370] 1.3E-122 - T[377-388] 1.3E-122 - T[412-430] 1.3E-122
SMART
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 1.1E-69
ProSitePatterns
Tubulin_CS (IPR017975) - T[140-146] .
SUPERFAMILY
Tub_FtsZ_C (IPR008280) - T[244-429] 3.66E-84
SMART
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 1.7E-49
Pfam
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 1.2E-42
Gene3D
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 1.2E-57
Gene3D
Tubulin_C (IPR023123) - T[374-445] 2.0E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBB4B_HUMAN 96.721 % 849 0
TBB2B_HUMAN 96.047 % 851 0
TBB2A_HUMAN 95.814 % 848 0