- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S41....' >
- Transcript 'KH2012:KH.C11.110.v2...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S35.g03177.01.t
Possible name(s)
TUBB2A; TUBB2B; TUBB4B
Gene model
Location
S35 [414,334 / 416,684]
Amino acid sequence
Length: 446
>Harore.CG.MTP2014.S35.g03177.01.p
MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTCSYAGDSDLQLERINVYYNEANGGKYV
PRAVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDTVMDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLVSKIREEYPDRMMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEEEEDHE
Nucleotide sequence
Length: 1,655
>Harore.CG.MTP2014.S35.g03177.01.t
ATTTTAAATTTGGAGCCGGTTTTCTAAGTTGCGTTAAAATATGCGTGAAATAGTCCATTT
ACAGGCGGGGCAATGCGGCAACCAGATCGGTTCAAAGTTTTGGGAAGTTATATCTGATGA
ACATGGAATCGATCCAACCTGTTCATATGCCGGTGACAGTGATTTACAACTGGAAAGAAT
AAATGTCTATTACAACGAAGCAAATGGAGGAAAATATGTTCCACGTGCGGTTCTCATCGA
TCTTGAGCCAGGAACAATGGATTCCGTAAGATCTGGACCATTTGGGCAAATATTCCGTCC
CGATAATTTCGTTTTTGGACAAAGTGGCGCCGGTAATAACTGGGCGAAAGGCCATTACAC
CGAAGGTGCTGAATTAGTCGACACTGTTATGGACGTTGTCAGAAAAGAGGCAGAGGGATG
TGATTGCCTTCAGGGTTTCCAGCTAACGCATTCATTAGGAGGAGGCACTGGATCTGGTAT
GGGAACGCTCCTCGTCAGTAAAATTCGTGAAGAATATCCTGATAGAATGATGAACACTTT
TAGCGTCGTGCCGTCTCCCAAAGTATCCGATACCGTAGTAGAACCTTACAATGCGACGCT
TTCCGTCCATCAATTAGTAGAAAATACCGACGAAACCTACTGTATCGACAATGAAGCACT
GTACGACATCTGCTTCCGTACTCTGAAGCTTACTACGCCGACATATGGAGATTTGAACCA
TCTCGTTTCAGCTACGATGAGTGGCGTAACTACATGTCTCCGTTTCCCAGGACAACTGAA
CGCCGATCTTCGTAAACTCGCTGTAAACATGGTCCCCTTCCCCCGTCTTCACTTCTTCAT
ACCCGGTTTTGCTCCTCTTACCAGCAGAGGTAGTCAGCAATACCGAGCCTTGACTGTTCC
TGAATTGACCCAACAGATGTTCGATTCTAAAAACATGATGGCTGCTTGTGATCCTCGTCA
TGGACGATATCTCACAGTCGCAGCAATGTTCCGTGGTCGTATGTCGATGAAGGAAGTTGA
TGAGCAAATGCTGAATGTACAAAACAAAAACAGCTCCTACTTTGTCGAATGGATTCCAAA
CAATGTGAAGACGGCAGTGTGTGATATCCCACCCCGTGGATTGAAAATGTCGGCAACTTT
CATTGGGAACAGTACAGCTATTCAGGAGCTGTTCAAACGCATCTCGGAGCAGTTCACTGC
CATGTTCCGTCGTAAAGCGTTTTTGCATTGGTACACTGGAGAGGGTATGGATGAGATGGA
ATTCACAGAGGCCGAAAGCAATATGAACGACTTGGTTAGTGAATATCAGCAATACCAGGA
TGCAACAGCCGAAGAGGAAGGAGAGTTTGACGAGGAGGAGGAAGAAGAGGATCACGAATA
AATAATCTTTTGGAAATCAATAATGAAATTTAATTAGATTTTACTCTCCTTGCCAATAAT
TAAATTCTGTTCTTCATGGTATGCAGTAAAATTCATTCTTAGTATTTAGCCTTTCTTGAC
TCTTGTCTAGAAATTATATTCCATTTGCTGTGCAATTCCTTCTTTAGCTCAGTTTGTTCC
TTGCAAAGTCCATTCTTTTCGGCAAGCTATAGCCTCGTGTCTGAATTTCCTTGGCACGAA
GTTCTCCACTATCAATAAAACCTAACTCCAACTGG
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 3.5E-126 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 5.63E-102 |
| ProSitePatterns |
Beta-tubulin_BS (IPR013838) - T[1-4] . |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 2.9E-69 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 6.2E-105 - T[51-70] 6.2E-105 - T[93-104] 6.2E-105 - T[106-130] 6.2E-105 - T[132-150] 6.2E-105 - T[151-172] 6.2E-105 - T[176-189] 6.2E-105 - T[190-210] 6.2E-105 - T[370-398] 6.2E-105 |
| PANTHER |
Beta_tubulin (IPR002453) - T[12-444] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[12-444] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[41-58] 1.3E-122 - T[88-99] 1.3E-122 - T[108-126] 1.3E-122 - T[152-164] 1.3E-122 - T[212-224] 1.3E-122 - T[230-239] 1.3E-122 - T[245-258] 1.3E-122 - T[265-281] 1.3E-122 - T[311-329] 1.3E-122 - T[329-343] 1.3E-122 - T[347-370] 1.3E-122 - T[377-388] 1.3E-122 - T[412-430] 1.3E-122 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 1.1E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[140-146] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[244-429] 3.66E-84 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 1.7E-49 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 1.2E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 1.2E-57 |
| Gene3D |
Tubulin_C (IPR023123) - T[374-445] 2.0E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 96.721 % | 849 | 0 |
| TBB2B_HUMAN | 96.047 % | 851 | 0 |
| TBB2A_HUMAN | 95.814 % | 848 | 0 |