- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C2.101.v1....' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Region 'REG00000830' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S34.g02429.01.t
Possible name(s)
HMBS
Gene model
Location
S34 [304,198 / 308,063]
Amino acid sequence
Length: 273
>Harore.CG.MTP2014.S34.g02429.01.p
MPYNDASEPTVLRVGTRKSPLAMIQTQWVVNELKKLNSNLDIEIVPMSTIGDRILDLPLS
KTGEKSLFTKELEESLTNRDLHLVVNSMKDMPSSLPPNLTISAVSKREDPNDAVVMHPKY
AEKRLEDLPDGSVIGTSSLRRIAQLRRKFPKLKFKSIRGNLNTRLRKLDHSGDYSALILA
AAGIKRMGWVDRLSYTLPPEDCLYAVGQGALAVETRSDDLNTIKIVSQLHDSETVIRCVA
ERAFLKTLEGGCSVPVAIHTYIKEDEHNVSTNF
Nucleotide sequence
Length: 1,292
>Harore.CG.MTP2014.S34.g02429.01.t
ATCAGCATCGCAACCGGTGAGGCGATGACACTCGTTCTATATCAGCTTTCAACCACGTAG
CCTTACTGTCAATGAAAGCTATACTTCTAGACTGAATAGTTAGCCTAAAAGATGCCATAC
AACGATGCAAGTGAACCCACAGTGTTGAGAGTAGGAACTCGCAAAAGCCCTCTCGCAATG
ATTCAGACACAATGGGTAGTAAATGAACTGAAAAAACTCAACAGCAACTTGGATATAGAA
ATAGTGCCTATGTCAACCATTGGAGATAGAATTCTTGATTTACCTCTTTCAAAGACTGGA
GAGAAAAGTCTTTTTACAAAAGAGCTGGAAGAATCATTAACTAACAGGGATCTACACCTC
GTCGTTAATTCTATGAAAGATATGCCGTCATCACTTCCACCAAACCTGACAATTTCAGCC
GTGTCAAAGAGAGAAGATCCTAATGATGCTGTTGTTATGCATCCAAAATACGCAGAAAAA
AGACTCGAAGATTTGCCTGATGGAAGTGTGATTGGGACAAGTTCACTCAGAAGGATCGCT
CAACTACGAAGAAAATTCCCCAAGTTGAAATTTAAAAGCATTCGTGGAAATCTCAATACT
AGGTTGAGGAAACTGGACCATTCTGGTGACTACAGTGCCTTGATATTAGCGGCCGCTGGT
ATAAAGCGTATGGGATGGGTTGATCGTTTGTCTTATACATTACCTCCGGAGGACTGCTTG
TATGCTGTGGGACAAGGAGCTCTTGCTGTTGAAACACGTTCGGATGATTTGAATACCATC
AAGATTGTCTCGCAGCTGCACGACTCTGAGACAGTCATTCGATGTGTGGCTGAACGAGCT
TTTCTCAAAACGCTGGAAGGAGGATGTTCGGTGCCTGTAGCTATACATACGTATATCAAA
GAGGATGAGCACAATGTATCTACAAATTTCTGATGTCTCGTACTCCTAACCTTGATATTC
CCTTGCAGTTGTATGTGGAAGGTGGTGTATTCAGTTTGGATGGCACCAAGGCAATCATAG
AAAAAATGCAGGCTTCATTGTCCTCTGACAAAGAATGGGATGATGTGGTATATGATACTT
TGATGTTTTTTTATATTTGATTCAAAGCTGCTGAGAAAAATGGAAATTGTGAGTTTGCCA
GCATCACAGTTCAATACCATTTCATAAGTCCCTTTCTTTTGAAAACTTCTGGACATTTGG
GCCGTGACTTGGCACTGCTCATGCTAAAACGAGGTGCCAAGGAAATATTGGATGAAGCTA
GAATACAAAATTTACAGAACGCAGGAATCTAG
| PIRSF |
HemC (IPR000860) - T[2-273] 1.2E-103 |
| PANTHER |
HemC (IPR000860) - T[8-270] 1.2E-112 |
| TIGRFAM |
HemC (IPR000860) - T[12-269] 1.1E-90 |
| Pfam |
Porphobilin_deaminase_N (IPR022417) - T[12-222] 1.4E-75 |
| PRINTS |
HemC (IPR000860) - T[51-71] 6.5E-46 - T[82-101] 6.5E-46 - T[133-150] 6.5E-46 - T[152-169] 6.5E-46 - T[240-257] 6.5E-46 |
| SUPERFAMILY |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[230-267] 2.35E-11 |
| Gene3D |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[231-271] 5.1E-14 |
| Pfam |
Porphobilinogen_deaminase_C (IPR022418) - T[236-266] 3.0E-10 |
| ProSitePatterns |
Porphobilin_deaminase_cofac_BS (IPR022419) - T[241-257] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HEM3_HUMAN | 62.109 % | 334 | 5.64E-115 |