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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S348.g00350.01.t

Possible name(s)

NPM1; NPM3

Gene model

Harore.CG.MTP2014.S348.g00350

Location

S348 [77,714 / 84,376]

Sequences

Amino acid sequence

Length: 435

>Harore.CG.MTP2014.S348.g00350.01.p
MIVNNVHLFKSAIDVLKMNVPECKPYYTRIMAASMPGFGPSETKEYLWQAELKKDKKTVR
WDGHPDGQLEQIVLKLAVLGPNAVKDERNIVEVVSFNREQDKVKTCICSLTMGAKENQTL
SDLSLFPPVNFTLIQGSGPLHITANHIVLEEEEDDGLSDDEDDESDEVDEENFADLREKL
LNRVANGKGDAKLGKRKASEGDGDDDDDDYDDEDEDEMEDEDEDLEIIEVKTTNKRNSGK
GKKKKEVAKVEDEEDAEDDEEEEVEAPAKKLKLGNGKAESKTKASDKKKPKTPVKKENGD
EPKTPKSQKTPVKKENGEEPKTPKNQKTPDAKTPKSEKKTPGKVYTSMEEIKAAIDKYPG
GKPRKEDKFCNWVKNTYKISDTTVSPIVDRGVVEMAQKSYWTVMVDDQPFLRSIGFTPAG
TLFDDSTLGYFVHHG

Nucleotide sequence

Length: 1,406

>Harore.CG.MTP2014.S348.g00350.01.t
ATGATAGTGAATAACGTTCATTTATTTAAATCTGCCATTGACGTCTTGAAAATGAATGTT
CCCGAGTGTAAACCATATTATACAAGAATAATGGCTGCGAGTATGCCCGGTTTTGGACCA
AGTGAAACAAAGGAATATTTATGGCAAGCAGAGTTGAAGAAAGATAAGAAAACAGTCAGA
TGGGATGGACACCCTGATGGACAACTGGAACAAATAGTGCTTAAATTGGCTGTTCTGGGT
CCCAATGCCGTGAAAGACGAGAGAAATATTGTCGAAGTCGTATCATTCAACAGAGAACAG
GATAAAGTTAAAACGTGCATTTGTTCTCTAACTATGGGAGCCAAAGAAAATCAAACTTTG
TCTGATTTGTCTCTGTTTCCTCCAGTAAATTTCACCCTAATTCAAGGTTCTGGACCGCTA
CATATCACTGCCAACCATATCGTTCTTGAAGAAGAAGAAGATGATGGGTTATCCGATGAT
GAAGACGACGAATCTGATGAAGTTGATGAAGAAAATTTCGCTGACTTGCGAGAAAAATTA
CTGAATAGAGTTGCCAATGGAAAGGGTGATGCAAAACTTGGTAAAAGAAAAGCAAGTGAA
GGCGATGGTGATGATGATGATGATGATTATGATGATGAAGATGAAGATGAAATGGAAGAT
GAAGATGAGGACTTAGAAATAATTGAAGTGAAGACTACAAATAAGAGAAATTCGGGTAAA
GGAAAAAAGAAAAAGGAAGTTGCTAAAGTAGAAGATGAAGAGGATGCTGAGGATGATGAA
GAGGAAGAAGTTGAGGCACCGGCTAAAAAGTTAAAGCTAGGAAATGGAAAAGCGGAATCC
AAGACAAAGGCATCTGACAAAAAGAAACCAAAAACACCAGTGAAGAAGGAAAATGGGGAC
GAACCTAAAACGCCTAAAAGTCAGAAAACACCAGTGAAGAAGGAGAATGGGGAGGAACCT
AAAACGCCGAAAAATCAGAAAACACCAGATGCCAAAACGCCTAAGAGCGAGAAAAAAACT
CCTGGCAAAGTCTATACTTCGATGGAGGAAATAAAGGCTGCTATTGACAAGTATCCTGGT
GGAAAGCCGAGGAAAGAGGACAAATTCTGTAACTGGGTGAAGAATACATACAAGATAAGT
GACACCACGGTAAGTCCTATTGTGGATAGGGGAGTTGTGGAAATGGCACAAAAAAGCTAT
TGGACTGTAATGGTAGATGATCAGCCATTTTTGAGGTCTATTGGTTTTACGCCTGCTGGA
ACGTTGTTTGATGATTCTACACTAGGATACTTTGTGCATCATGGTTAGCAAACGTTTCCT
TGTCTTTGTTTGGCTTCTAATACGTTTTTGTGCTGTACAGTACTGCCACTACTCTTTTCA
TTAATAAAAGCTCTTGTGCATTTTAA

InterProScan

PANTHER
Nucleoplasmin (IPR004301) - T[42-245] 2.6E-50 - T[250-384] 2.6E-50
SUPERFAMILY
Nucleoplasmin_core_dom_sf (IPR036824) - T[43-148] 1.83E-24
Pfam
Nucleoplasmin_core_dom (IPR024057) - T[46-148] 4.2E-26
Gene3D
NPM1_C_sf (IPR038101) - T[345-386] 2.0E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value