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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.1043.v1...' > 
  2. Molecular Tool 'Pem MO (Shirae 2011)' > 
  3. EST 'AHC0AAA232YK02_RM1' > 
  4. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S348.g00092.02.t

Possible name(s)

FGF17; FGF18; FGF8

Gene model

Harore.CG.MTP2014.S348.g00092

Location

S348 [49,414 / 70,419]

Sequences

Amino acid sequence

Length: 528

>Harore.CG.MTP2014.S348.g00092.02.p
MKFYSSNSAMRSLIAVILLLLLLHIKMETWCLYGVCVYDSACLTLNKRVGEMFEPMGWWA
STSPTLRKDESEVVKFAQDNALQNALLSVAKQKPRKCQIYSRLTRKHIQIFKRRVVAQGE
DQNRHSIIEKISQTFGVVTMRGVEANRYLCMNSRGKLIARKRLAPDRSCWFREIIEPSYY
TSFVNFKYSSWHIGFNRHGKAKKGNKTTQNQVACNFLVRNLEKSEIPPQETDIIFRELAT
KIRLGILKDRQHSLSRKRNRRHRFQTEYPMDTQHLEEPTNFSDEHIAEIPSWLINPPSNT
SSLKRTEWILRVTDFMKKNDYSLELNTTGWWGSMTLTKPSKTPLQSPKYPKKKRKNGKRK
RQGGKATKSVTEKKPSKTEFIKIDVEFDKDRINTTASPEIKTVAQKTPLLSKAEPEPEKL
PPATRMSSGGGGKRHGKGKRARKKGKKITEISPDLSDFQDTNNNNNNKNKNTNLSREKFD
KDIFLRTVEPSITTIISNTLDVKRMRTNRGKRGQKNTRTRKRTSSPRT

Nucleotide sequence

Length: 2,783

>Harore.CG.MTP2014.S348.g00092.02.t
GCCTGCGATCGGGATTTGCATTTAATTGGTCAACGCTAAGAAGCGCGACACACTGATTTG
TTAAACCAAGTCGATTCTTAGTTAGGGGGTTAGCTTGTTATACTACTGCATAGGTCATCA
TATGAAACCTGATCGACAATGGATATTCGTCCTGAAGATCTCTAATTTGGATTTAAGGTA
TCGCTCGCCGAAAGTGGTTAAATACCCAACCTCGACGCCTGTACTACTAAGTTCGGGGCC
AAAAGATCTCTACATCCCGGCAAAAAAAGTTTCGTTTCACCGAGCTGACAAGTTCGCCAG
AGTGTCGACCAAGCTATTATACTTTACCTATATTGTCTATCGGTATACTCTGCACTGCCC
GCATTCTCTGGAAATGGACGTTAAGTTGTAAGAGCGAGAATAAGTCATTGGGAGGAAAAA
ACTACTATTTTTTGGCATAGCGTTCATCGTATCGTTCGTCATCATGAAATTTTATTCTTC
AAACTCAGCCATGCGTTCACTCATTGCCGTAATTCTGCTCCTGCTCCTGCTCCATATAAA
GATGGAAACTTGGTGCTTGTATGGCGTCTGTGTTTATGATTCAGCATGTTTGACATTAAA
TAAACGTGTCGGTGAAATGTTTGAACCCATGGGGTGGTGGGCGTCAACTTCTCCGACCCT
ACGGAAAGACGAAAGCGAAGTTGTGAAATTCGCGCAGGATAACGCCTTGCAGAACGCACT
ACTCTCCGTCGCAAAGCAAAAGCCGCGAAAATGCCAAATCTATTCAAGATTAACAAGAAA
ACATATCCAGATCTTCAAGAGGCGAGTTGTCGCCCAAGGAGAGGATCAAAATCGACACTC
TATTATTGAAAAAATCTCCCAAACGTTCGGTGTCGTCACTATGAGAGGTGTCGAAGCTAA
TCGATATCTCTGCATGAATTCGAGAGGGAAGCTTATTGCGAGAAAACGTTTAGCTCCCGA
TCGATCGTGTTGGTTCCGAGAAATCATTGAACCATCGTACTATACGTCGTTCGTCAATTT
CAAATACAGTTCGTGGCATATCGGTTTCAATAGACACGGGAAGGCAAAAAAAGGCAACAA
AACGACTCAGAATCAAGTCGCATGCAATTTTCTCGTACGCAATCTGGAGAAGTCCGAAAT
ACCCCCGCAGGAGACAGACATCATATTCAGAGAGCTTGCCACGAAAATCCGACTAGGGAT
TTTGAAAGATCGTCAACATTCGCTGTCCCGAAAGCGAAATCGAAGACATCGGTTCCAAAC
CGAGTATCCTATGGATACGCAACACCTCGAAGAGCCGACTAACTTTTCGGACGAACACAT
CGCCGAGATCCCTAGTTGGCTAATTAATCCGCCATCAAACACGTCGTCTCTGAAGAGAAC
CGAATGGATCCTACGCGTAACAGACTTTATGAAAAAGAACGACTATTCATTGGAACTCAA
CACTACAGGGTGGTGGGGCAGCATGACTTTAACCAAACCGAGCAAGACTCCACTCCAGTC
GCCGAAATATCCCAAGAAAAAAAGGAAAAATGGAAAAAGAAAAAGGCAGGGAGGAAAAGC
TACGAAATCTGTGACTGAAAAAAAGCCTTCAAAAACTGAATTTATAAAGATAGACGTCGA
ATTCGACAAGGATCGTATAAATACGACGGCATCACCCGAAATCAAGACCGTAGCGCAGAA
GACTCCTCTCTTATCCAAGGCAGAACCAGAGCCGGAGAAGTTACCGCCCGCCACGAGAAT
GAGCAGCGGGGGCGGAGGTAAGCGCCACGGCAAGGGTAAAAGGGCGCGAAAGAAAGGGAA
GAAAATTACTGAAATTTCGCCCGACTTGAGCGACTTTCAAGACACTAATAATAACAATAA
TAATAAAAATAAAAATACCAACCTTTCAAGAGAAAAATTTGATAAAGACATTTTTTTGCG
AACGGTGGAACCGTCGATAACGACGATAATATCGAATACGCTCGATGTGAAACGAATGAG
AACTAACCGCGGAAAACGCGGGCAAAAAAATACGAGAACGCGGAAGCGTACGTCGTCGCC
GAGGACGTGATATTACTTGTCGAAATGACTTCCTTTTTAATTTCATTTTTCCGTACCAAA
ACTTCAAGTTTTTTTAGTGATCGGTATTTTGTTCATGTAAGTCGTGCAAATTTTTTTTTT
TATCTTTCAATGTTAGTGGTTGATTTAATTCTTCGAGGTCCAAGTCGTATCTTCCTGAGT
AATGATTGTACTACGAAAAAGGAGTACAGTACTTTTATCTGTTGCACAACGTCAAAAATA
AATCTCAAAGATAGTTCATTATATAAGAGAATTTAAAAAAAAGGTTTGTTCCCTGAAGGC
ACAATTAGCTGAGTGTGTGTGGATATTTTTATAGGTATGCGATTGAGCATGATTGAAATA
TTTAGCAACGTATTTAAAGCGTTCAAACGTCAAATTTGTTTATCGTTTAAAAATACGTTT
CAATAACGTTTGCCAGAGTTTAAAAAAAAACGTTTATTACCTGCGATATTGTATAACTAT
GTTACGAGCTTTCAAAAATAGCACATACTAAAATATATTTACACAAAATTCTAGTCTATT
TTTAACGTGAGAGTGGCGTTTTTCGATTTGGTGAGGCCTGTGATCAATTAATATCTTAGA
AAATATCGAATTTAATTGATTTCAACGTTTAAAATTCAATTCTATCAAATCAAATCTCGA
TTTTAATACATGGGAGTAAAAGAGTATATTGGAAATTCAATTTTATCGTCATTTCAACTA
TTAATGTGTCTATTTGGAGCCGA

InterProScan

PANTHER
Fibroblast_GF_fam (IPR002209) - T[80-363] 3.2E-37
SUPERFAMILY
IL1/FGF (IPR008996) - T[93-220] 1.96E-34
SMART
Fibroblast_GF_fam (IPR002209) - T[93-220] 2.9E-25
Pfam
Fibroblast_GF_fam (IPR002209) - T[95-217] 9.3E-31
CDD
Fibroblast_GF_fam (IPR002209) - T[98-220] 4.5287E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FGF18_HUMAN 38.519 % 101 1.23E-24
FGF17_HUMAN 35 % 97.8 2.37E-23
FGF8_HUMAN 38.583 % 92 3.7E-21