Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC2BAA5YF21' > 
  2. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S339.g03271.01.t

Possible name(s)

SIGMAR1

Gene model

Harore.CG.MTP2014.S339.g03271

Location

S339 [82,971 / 85,171]

Sequences

Amino acid sequence

Length: 330

>Harore.CG.MTP2014.S339.g03271.01.p
DMNLNNYIIIHEHLSNKICRGLHSANHKLMITKYHFSRKERDDIGNRSWLIGSSRLTIRN
KGSNSLIKSRTNENYPGTVTASVTATFSIILLLAVNRKGNSWRFSYEFNTKEVRNIAYKC
SGTSYSHSCLLSHLKDDDAILIATDSPRLSVSTGGLHGAISLLYGSVSEFLAVYQARIHT
SGSTGRHFMNISVTILTGEVVVWSEKAQTSKVFSAGDHYVHRIGEKSFVEMSKGTELMLY
GRGFLPLTMGYWISDSLFSSFDIATAVLTVTYYIRTVYRCSAMTATISYYYKMLWMLVYE
GVLALPDFGRSIFNWFSGRIPYGNENIMDN

Nucleotide sequence

Length: 1,599

>Harore.CG.MTP2014.S339.g03271.01.t
AGATATGAATCTAAATAATTATATTATAATACATGAACACCTATCGAATAAAATATGCAG
GGGTCTTCATTCGGCCAACCACAAGCTAATGATTACCAAATATCATTTCAGCAGAAAAGA
GAGGGACGATATTGGAAACAGAAGTTGGTTGATCGGTTCGTCACGTCTTACAATCAGGAA
CAAAGGCAGTAACTCGTTAATAAAAAGCAGAACAAACGAAAACTACCCGGGGACTGTGAC
TGCCTCGGTTACTGCTACATTCTCTATCATTCTATTGCTGGCAGTTAACCGTAAAGGAAA
TTCATGGCGCTTTTCCTACGAATTTAACACAAAAGAAGTTAGAAACATTGCGTATAAATG
CTCAGGAACGTCTTACAGTCATTCGTGCTTGCTGAGTCACTTAAAGGACGATGATGCCAT
ATTGATAGCAACGGATTCTCCGCGGTTGTCTGTATCAACAGGTGGTCTTCATGGGGCCAT
TTCACTGTTGTATGGTTCAGTGTCTGAATTTCTTGCAGTTTACCAAGCTCGTATTCACAC
TTCGGGAAGTACAGGTCGACACTTCATGAACATCTCAGTTACTATATTGACCGGAGAAGT
TGTTGTTTGGAGTGAAAAAGCTCAGACTAGTAAAGTTTTCTCTGCAGGAGATCATTATGT
ACACAGAATCGGTGAAAAATCATTTGTTGAAATGTCAAAAGGAACCGAATTGATGCTTTA
CGGCCGAGGATTTTTACCGCTGACAATGGGATACTGGATATCAGACAGTCTATTCAGTTC
CTTCGATATTGCAACAGCAGTACTTACTGTCACATACTATATACGGACCGTTTACAGATG
TTCTGCTATGACTGCAACCATTTCGTATTATTATAAAATGCTATGGATGCTTGTGTATGA
AGGAGTGCTTGCTTTACCAGACTTCGGTCGTTCAATCTTCAATTGGTTTTCAGGACGTAT
TCCATATGGAAATGAGAATATCATGGATAATTAAAAACTAATTTTCATACTAACTGTTAC
AAGTAATTGCATAACGTGAAGGAAATAATTCGGTCATGCAGTGTCTTTTGTGAATATTTG
GGAGAATATGCCAAAACAAAAACAACCTCAGTTGTACTTCTGTTTTTGCGATGTTTATTA
TTACAAAGTAAACTAGAGAACTTTTTAATCAGCCATGCATACAAAGAAAGCATAACCATA
AGCTAACTTTGTACATGTGTAGTACAAGTACAAAGAAAGTTTTTCTTCTATTTTATTTAA
ATCTTGAAAATCACTAATGAAATCACTCTTTTCTCTTCTTTTGAACTGCGATAATATGAT
AAAAAGGGTCCACACCATCACCATATACTCTGCCAACAATGACTTAGTAAAGTAGCATGC
CTCTTCAGTGGGTCTACTACCAAATAGGCAAAATCTTGAATATGATTTTTCGTGCTAGGA
TATACCATTTCATTTTCATCCTTGACTGTAAATTTATATACTTTGGAAACCACACTCAAT
TCTTTTGTCACTGGATCTTTTTGTATGCTAAAATTAATTTTTTTACATGAAATTATTTCA
ATGCTTTCCACTTTCTAAATAAATTTCATTATGATAATA

InterProScan

Pfam
ERG2_sigma1_rcpt-like (IPR006716) - T[103-278] 5.9E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SGMR1_HUMAN 30.857 % 88.6 1.16E-20