- Transcript 'KH2012:KH.C8.625.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Moocci.CG.ELv1_2.S23...' >
- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S336.g01836.01.t
Possible name(s)
TUBB2B; TUBB4A; TUBB4B
Gene model
Location
S336 [80,809 / 82,630]
Amino acid sequence
Length: 467
>Harore.CG.MTP2014.S336.g01836.01.p
MSEGQGRSVVFRFSILLFYRFNMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGSYAG
DSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG
NNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE
YPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS
QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNS
SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY
TGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEDENA
Nucleotide sequence
Length: 1,404
>Harore.CG.MTP2014.S336.g01836.01.t
ATGTCTGAGGGACAAGGTCGTTCTGTAGTTTTCAGGTTTAGTATCTTGTTATTTTACCGG
TTTAACATGCGTGAAATAGTGCACCTGCAAGCTGGACAGTGTGGAAACCAGATCGGAGCC
AAGTTCTGGGAAATTATTTCTGATGAACATGGCATTGATCCTACTGGCAGTTACGCGGGA
GACAGTGATCTTCAGCTGGAAAGAATTAATGTCTATTACAATGAGGCCACTGGTGGTAAA
TATGTACCCCGAGCAGTCCTCGTTGATCTTGAACCGGGAACCATGGACTCCGTTCGATCT
GGTCCGTTTGGACAGATCTTCCGACCTGACAATTTTGTATTTGGTCAAAGTGGTGCTGGT
AACAACTGGGCGAAAGGCCATTACACAGAAGGTGCAGAGCTTGTAGATTCTGTGCTTGAT
GTTGTAAGAAAAGAGGCAGAAGGATGCGATTGCCTTCAAGGCTTCCAGCTTACTCATTCG
CTTGGAGGTGGTACCGGATCCGGTATGGGCACACTTCTCATCAGCAAAATCCGTGAAGAA
TACCCTGACAGAATCATGAACACCTTCAGCGTTGTACCATCACCCAAAGTATCTGACACC
GTCGTCGAACCGTACAATGCAACTCTCTCAGTCCATCAGTTGGTTGAAAACACAGACGAG
ACATATTGCATCGACAACGAGGCTTTGTATGACATCTGCTTCCGTACACTCAAACTCACA
ACCCCCACTTATGGTGACTTGAACCATCTTGTTTCGGCAACCATGAGCGGTGTAACCACT
TGCCTACGATTCCCTGGACAACTGAATGCCGATCTTCGTAAACTTGCCGTCAACATGGTC
CCTTTCCCTCGTCTTCACTTCTTTATGCCTGGATTCGCCCCACTCACCAGCAGAGGCAGC
CAACAGTACCGTGCCTTGACTGTTCCTGAGCTCACTCAACAAATGTTCGATGCCAAAAAC
ATGATGGCCGCTTGCGATCCTCGGCACGGACGCTATCTCACTGTTGCCGCTATGTTCCGT
GGTCGTATGTCAATGAAGGAAGTTGATGAACAGATGTTGAACGTCCAGAACAAGAATAGT
TCATACTTTGTTGAATGGATTCCTAACAATGTGAAGACCGCTGTGTGCGACATTCCCCCA
CGTGGTCTTAAAATGTCTGCCACTTTCATCGGAAACAGCACTGCTATCCAAGAACTGTTC
AAGCGTATCTCGGAACAATTCACAGCTATGTTCCGTCGTAAGGCTTTCTTGCATTGGTAC
ACTGGTGAGGGTATGGACGAGATGGAATTCACTGAAGCCGAGAGCAACATGAACGACTTG
GTCAGCGAATATCAGCAATACCAAGATGCCACAGCAGAAGAGGAGGGTGAATTTGATGAG
GAAGAGGAAGACGAAAATGCTTAA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[23-265] 1.19E-102 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[23-285] 2.2E-127 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[25-233] 1.5E-68 |
| PANTHER |
Beta_tubulin (IPR002453) - T[28-466] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[28-466] 0.0 |
| PRINTS |
Tubulin (IPR000217) - T[32-52] 3.0E-105 - T[73-92] 3.0E-105 - T[115-126] 3.0E-105 - T[128-152] 3.0E-105 - T[154-172] 3.0E-105 - T[173-194] 3.0E-105 - T[198-211] 3.0E-105 - T[212-232] 3.0E-105 - T[392-420] 3.0E-105 |
| PRINTS |
Beta_tubulin (IPR002453) - T[63-80] 6.7E-124 - T[110-121] 6.7E-124 - T[130-148] 6.7E-124 - T[174-186] 6.7E-124 - T[234-246] 6.7E-124 - T[252-261] 6.7E-124 - T[267-280] 6.7E-124 - T[287-303] 6.7E-124 - T[333-351] 6.7E-124 - T[351-365] 6.7E-124 - T[369-392] 6.7E-124 - T[399-410] 6.7E-124 - T[434-452] 6.7E-124 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[69-266] 2.2E-70 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[162-168] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[266-451] 9.77E-85 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[268-405] 7.2E-51 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[283-403] 6.4E-43 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[286-395] 4.9E-58 |
| Gene3D |
Tubulin_C (IPR023123) - T[396-467] 1.7E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 97.978 % | 920 | 0 |
| TBB2B_HUMAN | 96.18 % | 910 | 0 |
| TBB4A_HUMAN | 96.404 % | 904 | 0 |