Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S332.g01177.02.t

Possible name(s)

PNO1

Gene model

Harore.CG.MTP2014.S332.g01177

Location

S332 [51,768 / 53,675]

Sequences

Amino acid sequence

Length: 231

>Harore.CG.MTP2014.S332.g01177.02.p
MDNSTEKCGDFEPVVTRKRKLKISMDTASSEHNVKRPHFPQISGDKLMEDKKSFRKIPVP
ANRYTPLKEHWMKIYKPIVEQLKLQIRFNLKTRNVELQTCKETADIGALQRAADFVKAFI
LGFVVEDALALVRLDELFLESFQITDVKPLKGDHLSRAIGRIAGSGGRTRFTIENITKTR
IVLANSHIHILGSYQNIRMARTAICNLILGSPPSKVYGNLRGVASRASERF

Nucleotide sequence

Length: 933

>Harore.CG.MTP2014.S332.g01177.02.t
GTATTTAGCATAGCGTTCACAATTGTATCTCCTCTCTTAGTTTTACGTATTATTTTATAT
ATATATTTCAAAAATAAATAAGTAGAATGGATAATTCTACAGAAAAGTGTGGTGATTTTG
AACCTGTGGTGACCAGAAAGAGGAAATTGAAAATATCTATGGATACTGCATCAAGTGAAC
ATAATGTTAAACGCCCTCATTTTCCCCAAATAAGTGGTGATAAATTAATGGAGGATAAAA
AGAGTTTTCGAAAAATACCGGTTCCGGCGAATCGCTACACTCCGTTAAAGGAACACTGGA
TGAAAATCTATAAGCCTATAGTGGAACAACTCAAACTGCAGATCCGATTCAATCTTAAAA
CAAGAAACGTTGAGCTACAGACTTGCAAAGAAACAGCAGATATTGGTGCTCTACAGCGGG
CTGCAGATTTTGTAAAAGCTTTCATTTTGGGATTTGTAGTTGAGGATGCTTTGGCTCTCG
TTCGACTCGATGAATTGTTTCTTGAATCTTTTCAGATAACTGACGTGAAACCTTTGAAAG
GCGATCACTTATCGAGAGCTATCGGACGGATAGCAGGGTCTGGAGGCCGGACAAGGTTCA
CAATTGAAAATATTACAAAGACGAGGATAGTTTTAGCCAATTCGCATATTCACATTTTAG
GCTCATATCAAAACATCAGAATGGCTAGAACTGCCATATGTAATTTAATATTGGGTAGTC
CTCCTTCGAAAGTGTATGGCAATTTGAGAGGAGTTGCTAGCCGTGCATCTGAAAGATTTT
GATTGGTTTTGCGTCAATAAATTTGTAACTCTGCTTGTATTTGTGGAATTAATGGAATAT
TCAGCCATTGCAAGGATTGGTTACGTTGTCGGTCATGGTTGTTTGTTCATCAGAAAACCT
ATCTTGTGGTCGTGTTGTTATCATTTTCTATCC

InterProScan

Gene3D	KH_dom_type_1_sf (IPR036612) - T[51-133] 5.1E-5 - T[135-231] 3.7E-27
SUPERFAMILY	KH_dom_type_1_sf (IPR036612) - T[136-227] 7.31E-19
SMART	KH_dom (IPR004087) - T[136-209] 0.0042

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PNO1_HUMAN	74.879 %	331	6.25E-116