Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g50677.01.t

Possible name(s)

UPP1; UPP2

Gene model

Boschl.CG.Botznik2013.chrUn.g50677

Location

chrUn [312,482,063 / 312,485,631]

Sequences

Amino acid sequence

Length: 299

>Boschl.CG.Botznik2013.chrUn.g50677.01.p
MVDNVFRLKNPNLGPHDYLYHFGISASDDLPAKFGDVKXVCTGGKSSRMKAFAVEMYEKL
GHPKNSILDDNNKPKDIGESAGRYSLFKVGKVLIFSHGIGQPSLSVALNEIIKLLHYAKC
TTDVKIIRIGSSGGLGVEPGTIIITDKPHNGMLKQEYNYVVMGKDLSIPCSTSDDLRNRL
VEVAKKLEIPSTMGNTISAEGFFEEQSRLDGAFCEYTNDDKMAFLRRVHDEYGIRNIEME
CTCLSALCARAGLGCAIVCPALLNRLLGDIVDITPEQVTLWQNNSFRIVGECIKECLEA

Nucleotide sequence

Length: 900

>Boschl.CG.Botznik2013.chrUn.g50677.01.t
TGGTTGATAACGTCTTTCGATTGAAGAATCCCAACCTGGGTCCACATGACTATCTATATC
ATTTTGGAATCTCCGCAAGTGATGATCTGCCTGCGAAATTTGGTGATGTCAAGGTTGTCT
GTACCGGAGGAAAATCATCAAGAATGAAAGCATTTGCTGTCGAAATGTACGAAAAACTTG
GACATCCAAAGAATTCTATTTTGGACGACAATAATAGACCAAAGGATATTGGAGAGTCAG
CTGGGCGATACTCGTTATTCAAGGTCGGCAAAGTATTGATATTCAGCCATGGTATCGGTC
AACCATCACTATCAGTAGCTCTAAATGAGGTAATCAAGTTGCTACACTATGCGAAATGCA
CAACCGATGTCAAGATAATTAGAATTGGATCGAGCGGTGGCCTAGGTGTTGAACCTGGCA
CGATTATAATAACGGACAAGCCTCACAACGGAATGCTAAAGCAAGAGTATAATTATGTGG
TGATGGGAAAGGATTTATCCATTCCTTGCTCTACGTCTGACGATCTGCGGAACAGGCTGG
TTGAAGTTGCGAAAAAACTAGAAATACCTTCAACAATGGGAAATACAATATCAGCTGAAG
GCTTTTTCGAAGGACAAAGTCGTCTCGATGGCGCCTTCTGTGAGTACACGAATGACGACA
AGATGGCTTTCTTGCGCCGAGTCCACGACGAATACGGCATCAGAAACATCGAGATGGAAT
GCACCTGTCTGTCGGCGCTCTGCGCCCGAGCCGGGTTAGGATGTGCAATCGTCTGCCCTG
CGTTGTTGAATCGTTTGCTTGGCGACATTGTGGATATCACACCCGAACAAGTTACGCTCT
GGCAGAATAATAGCTTCCGCATCGTTGGCGAGTGCATCAAGGAATGCTTGGAGGCGTGAA

InterProScan

TIGRFAM	Uridine_phosphorylase_euk (IPR010059) - T[16-297] 1.4E-91
SUPERFAMILY	Nucleoside_phosphorylase_sf (IPR035994) - T[16-294] 5.89E-36
Pfam	Nucleoside_phosphorylase_d (IPR000845) - T[81-260] 3.4E-19

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UPP1_HUMAN	42.333 %	217	1.82E-69
UPP2_HUMAN	38.776 %	208	8.77E-66