- Transcript 'Moocul.CG.ELv1_2.S66...' >
- Transcript 'Moocul.CG.ELv1_2.S91...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S329.g11603.01.t
Possible name(s)
IGFALS; LRIG3; LRRC15
Gene model
Location
S329 [21,812 / 24,503]
Amino acid sequence
Length: 392
>Harore.CG.MTP2014.S329.g11603.01.p
MFSECSRIMRSGIADKKGEFFYKKQILKVDCSGQNVTTIDSGFLRGIIREEEKIQLRRTP
KAFQGILYQALHDEGVTKHIGYYLTLEEASIKEIEDGVFNELPSLEGLNLKNNKLKKIAR
RSFEGLRHLTDLSLDGNEISQIESSSFFDLQNVKYLTATMNALKDVDYFSFQGLSKSNIL
NLSNNSITLMNSGTFAGAPLLEHLYLSHNRIRQLTGGTMAGLVQLKTLLLDNNIIKTISD
GTFLGMRNLEHLDLSNNYLSKIKFNTFKGLYYLRRLKLQNNKLISIEDQSFISMPLLREL
DISNNGLSTMTRGLFTGLINLQVFQISNNWMHEKAAERDEDLLDAIQIICRKPGLHYADV
RGNGLRDMLQGEDAVTYTIIDFSNSDQHRCVL
Nucleotide sequence
Length: 1,179
>Harore.CG.MTP2014.S329.g11603.01.t
ATGTTTTCAGAATGCTCGCGGATCATGCGAAGTGGAATTGCTGACAAGAAGGGAGAATTC
TTTTACAAAAAGCAAATTTTGAAGGTGGATTGCAGTGGTCAAAACGTAACAACAATCGAT
TCCGGTTTTCTTCGTGGGATAATCAGGGAGGAAGAAAAAATTCAACTACGGCGAACTCCT
AAAGCCTTTCAAGGTATACTTTACCAAGCTTTGCACGATGAAGGGGTTACGAAGCATATC
GGTTATTATTTAACACTGGAAGAAGCAAGCATCAAAGAAATAGAAGATGGGGTATTTAAC
GAACTGCCTTCTCTTGAAGGCTTGAATTTGAAAAACAACAAGTTGAAAAAGATCGCGCGA
CGTTCCTTCGAGGGTTTACGACATTTGACCGATCTGAGCTTGGACGGAAATGAAATATCG
CAGATTGAAAGCTCTTCCTTTTTTGATTTGCAAAACGTTAAATATCTCACGGCAACTATG
AACGCACTGAAGGACGTTGACTACTTTAGTTTCCAAGGCTTATCTAAGTCGAATATACTC
AACTTGAGCAACAACAGTATAACGCTGATGAATTCAGGAACTTTCGCCGGCGCTCCTCTT
TTAGAACATCTGTATCTGTCACACAACAGAATACGACAGTTAACCGGAGGAACAATGGCA
GGACTTGTACAACTGAAAACGCTTTTACTCGATAACAATATTATTAAAACGATATCAGAC
GGAACTTTCCTGGGAATGAGAAATCTTGAGCATCTGGATTTGTCAAATAATTACCTATCC
AAGATTAAGTTCAACACATTTAAGGGCTTGTACTATCTCCGACGACTAAAACTTCAAAAC
AACAAACTTATCTCGATCGAGGATCAGTCGTTCATCTCTATGCCACTACTTCGAGAACTT
GATATTTCTAACAATGGGCTTTCGACAATGACCAGGGGATTGTTCACTGGTTTAATAAAC
CTGCAAGTGTTTCAAATTTCTAATAACTGGATGCATGAGAAGGCAGCTGAACGCGACGAA
GATCTGCTTGATGCCATACAAATTATTTGCCGAAAACCCGGTTTACACTATGCTGATGTA
AGGGGAAACGGATTACGTGACATGCTGCAGGGAGAAGATGCAGTCACGTATACTATCATT
GACTTTTCGAACTCAGATCAGCATCGCTGTGTTCTTTAG
| Gene3D |
LRR_dom_sf (IPR032675) - T[22-226] 3.1E-33 - T[227-386] 6.3E-27 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[83-139] 3.2E-14 - T[161-211] 1.6E-11 - T[224-283] 3.4E-14 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[102-125] 0.025 - T[126-149] 0.57 - T[174-197] 42.0 - T[199-221] 15.0 - T[222-245] 0.45 - T[246-269] 0.012 - T[270-293] 25.0 - T[294-317] 0.028 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[104-125] 6.765 - T[128-149] 7.573 - T[176-197] 4.686 - T[200-221] 7.042 - T[224-245] 7.704 - T[248-269] 7.997 - T[272-293] 6.95 - T[296-317] 5.61 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALS_HUMAN | 32.639 % | 122 | 1.68E-30 |
| LRC15_HUMAN | 34.177 % | 108 | 8.34E-26 |
| LRIG3_HUMAN | 29.699 % | 103 | 1.09E-23 |