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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S325.g05903.02.t

Possible name(s)

MED13; MED13L

Location

S325 [43,774 / 56,991]

Sequences

Amino acid sequence

Length: 1,856

>Harore.CG.MTP2014.S325.g05903.02.p
MEEEELNTSASSQELKKELWIFWWGDEPSVEAIIHISGLMSEPEGSWEDHGLSYECRTLL
FKAIHNLVERCLLSENFVRLGKWFLHPYNKDKEEDKSERLSCSFTFFLRGETTVCTTAEL
ARHQFVQTITNQHLQQAINSNTHLDVLLSPYGLKGSLTGVSYKSIHEPAVKKVLEEWKPF
YPIHLAYDDLDDTDNDDFGITDSPVPPVVEVILAGVRMNYPSVYVLVPCKGQQSVPCIED
YNHRESPAASINPCDYSSASMPESPAQDDGGNHQKKTQSVYIKSLLSRVVNGQRSANPST
IPFKATTAENLSFLSCESNSEITDNKNSSTSWPHLFDPFKSPRHKMNYHPNEEDSPYSLG
RHKYPMDGVSSYSEERRKRIDKPNRPRPTTPFHHINAYQSIPTHAVSQEPINNCYLQNIT
LPPYCQDQEEDAHALNNSTFVNIGSESMCGQMFYPTGQNVPSEFHNHTCEELNNNLDRNP
DILSENPRDNSQGTASSMEQLQEYITLWKKFKLPIPAMEEVKQKTKKIAVKVEKPALMTD
SLDPQHIISPNALRLLKRMNNDFCDVQRDWSWSAINYKRRKLEEKSATDESEVSNSMQFS
SDPNATESQQVVAQHVTVGAVTGELAGMTVPSDPYDFEEDEKDLNYVGAFNTSAADINLK
QVGTWANRNNSVGPPNKLGNNEVSTSHLESLLTNTNMPLTNYSDQFTQPSPAMENSNMNK
LSNNISLTDKKDIQVSLHDLNHIFNESEEDDNGMPTPPDDHQDDNILDKKVRQNTTGVIE
TCLPDLHRMFPTPPSMEQQVCSPEGKSITNVPKCNISTNQVENVDVTQAVNGLSTGGVLN
YYDDRETRRLSIMNSEKDVKSLSNNAVNFEENRNMHGTADSNPSAVFSVTPLCKLPLPAN
YLPVKNLPSQSSFKNSNKLPQHVLYTPSWQIPLDTYMDITGNTNIHAGGNSHYNCVTANQ
TASIAMPPYSTYAQMPASVSSIHSPANFSTPARTPRGENVMASPASSIATPATGGRAHQL
TPSVASSAAQSDIYASRASSIYVNLMLSDSVLNLFRDVSFEQCTICVCNNNINGRDVDLG
YLPSIADNLQEGQYPCSCGFSAVRNRCLSVGAGLFLEDELEIVGKDLENMIVESRRYNHK
ISDVQVIRSAIEFSLKQSSNPFMRDFSRKENGSVAKLEISNIAVQLDIMEACMEAINGGI
SVMEDGIQSKIKLHHCKGVVHQWHTSRDILMKSSSSADEYRILQYLKPVLQDAIQKLRPE
RSYSCTQLVKGPLTWREFCKDNSFASEPLPVPLLLVGHDLDWMTVSPFALNFWEKLYLEP
FAGATNIAYIVVCPDVENVLQAAKSFFYELSSLYEHCRLGNHKPYLRILQDSGLLKVKGN
VSNSSILPDWYTQMIKMISTSSGQHDSDVDALECVKQYAQACTQNLVPLLTSQPSLALAD
LYTRPPQQSFHQTEPGNSNNPAVVKPGMIGSCQSISRPPTPLPQQQLTSQKGVRDITQVN
LIASKQCPSDCATIVLYFVDPFSSKCNPGFLLSIWNCYTDIIKCLPEPLKSSVVLQLVPV
EDILQTSNAVGSSSAGVVRSLAFSSYVQSRRRIPHNVQVRSMTAFGPAASHNEAIAKNIN
NLSMSSIYAPPFTLAIFKNKQRDILEQSSKDSNILYVSYCLSHDQKWLLASASDQSGEML
ETFCVNIEVPPRRISLHRRQRACIKSEGIQKLWSLCMGAITRTAFTQWRIVIGRLGRLGH
GEIQEWSKYLNRSSNHSVMSEKVQLKCNQCKLNGSSKHTNIISACLTSLEPEGSFSIFPD
FIKSIGRFGRSTTGGTQMQLKTPEDASCSHIYVFPTSSFVQAAGTTFQNGDFTDYA

Nucleotide sequence

Length: 6,275

>Harore.CG.MTP2014.S325.g05903.02.t
ATGGAAGAGGAGGAATTGAATACTAGCGCTTCCAGTCAAGAGTTAAAAAAGGAACTATGG
ATATTTTGGTGGGGTGATGAACCATCTGTGGAAGCTATTATACACATCTCAGGGTTAATG
TCTGAGCCCGAAGGATCTTGGGAAGACCATGGCTTGTCATACGAATGTAGGACACTACTT
TTTAAAGCGATACACAATCTCGTTGAAAGGTGCTTGCTCTCGGAAAATTTTGTTAGACTC
GGCAAATGGTTTTTGCATCCTTACAATAAAGATAAAGAAGAAGACAAAAGTGAAAGACTG
TCATGCTCCTTCACTTTCTTTCTTCGTGGTGAAACAACGGTTTGTACGACTGCCGAGCTT
GCAAGGCATCAGTTTGTTCAAACAATTACAAATCAGCATCTGCAGCAGGCCATCAACAGC
AACACGCATCTAGATGTTCTCTTAAGCCCATATGGCTTGAAGGGAAGTTTGACCGGTGTA
TCCTACAAGAGCATTCATGAACCAGCAGTGAAGAAAGTTCTTGAAGAATGGAAACCGTTT
TATCCGATACACCTGGCTTACGATGATCTGGATGACACTGACAACGATGATTTTGGTATC
ACCGATTCTCCTGTACCTCCTGTGGTGGAAGTCATCTTAGCTGGAGTGCGCATGAACTAT
CCATCTGTGTATGTCTTGGTTCCATGCAAAGGACAGCAGTCAGTGCCATGTATTGAAGAC
TACAATCATCGTGAATCCCCTGCAGCCAGCATAAACCCTTGTGATTACTCATCAGCCAGT
ATGCCGGAATCCCCCGCACAAGATGATGGAGGCAACCATCAAAAAAAGACGCAGTCCGTT
TATATAAAGAGTTTGCTGTCTAGAGTAGTTAACGGGCAACGCTCCGCTAATCCATCTACC
ATACCCTTCAAAGCAACAACAGCGGAAAATCTTTCTTTTCTCTCGTGTGAATCGAATAGT
GAGATCACGGATAACAAAAATTCCTCAACGTCGTGGCCTCATTTATTTGATCCATTCAAG
AGTCCAAGGCACAAAATGAACTATCACCCAAATGAAGAAGACAGTCCCTATTCTTTGGGA
AGACATAAATATCCGATGGACGGTGTTTCATCTTATTCCGAAGAAAGGAGGAAAAGAATC
GACAAGCCAAATAGACCAAGACCTACAACACCATTTCATCATATTAATGCATATCAAAGC
ATTCCTACTCATGCTGTCAGTCAAGAACCGATAAACAATTGTTATCTCCAAAATATAACT
TTACCACCTTACTGTCAAGATCAAGAGGAAGATGCCCATGCATTGAACAATTCTACATTT
GTCAACATAGGTTCAGAATCTATGTGCGGTCAAATGTTTTATCCGACTGGCCAAAACGTA
CCCTCTGAATTTCATAATCACACATGCGAAGAACTTAATAATAACTTGGATAGAAATCCG
GACATCTTATCTGAAAACCCACGGGACAATTCTCAGGGTACAGCGTCTTCTATGGAACAA
TTACAGGAGTATATAACACTTTGGAAGAAGTTCAAGCTTCCTATCCCAGCCATGGAAGAG
GTGAAGCAGAAAACAAAGAAAATTGCAGTGAAAGTAGAAAAGCCGGCGTTAATGACAGAC
AGTCTCGATCCACAGCATATCATTTCGCCTAACGCCCTTCGGTTACTGAAGCGAATGAAT
AATGATTTTTGTGATGTTCAGAGAGATTGGTCTTGGAGTGCAATAAATTACAAACGACGG
AAATTGGAAGAGAAAAGCGCAACTGACGAATCTGAGGTATCAAATTCAATGCAGTTCAGC
TCGGATCCTAACGCAACCGAAAGTCAACAAGTCGTGGCCCAACATGTTACTGTTGGTGCT
GTCACTGGGGAACTGGCTGGCATGACAGTTCCATCAGATCCATACGACTTTGAAGAGGAT
GAAAAAGATCTGAACTATGTTGGAGCCTTCAATACATCAGCGGCAGACATCAATCTTAAG
CAAGTTGGGACTTGGGCAAATCGAAATAACTCCGTTGGACCTCCTAATAAATTGGGAAAC
AATGAGGTTTCAACCAGCCATCTTGAATCATTGTTGACTAATACAAATATGCCTTTAACT
AATTATTCAGATCAATTTACACAGCCATCCCCTGCCATGGAGAACAGCAACATGAATAAG
CTCTCCAACAATATTTCTTTAACCGACAAGAAAGATATACAAGTCTCCTTACACGACTTG
AATCATATATTTAATGAATCCGAAGAAGACGACAACGGAATGCCAACTCCGCCGGATGAT
CATCAAGACGATAATATCTTAGACAAAAAAGTTCGTCAGAATACAACGGGAGTTATTGAA
ACTTGTTTACCAGATTTGCATAGAATGTTTCCAACACCTCCTTCAATGGAGCAACAAGTG
TGCTCACCTGAAGGAAAAAGTATTACCAATGTGCCAAAATGCAATATCTCCACAAACCAA
GTGGAAAATGTAGATGTAACCCAGGCTGTCAATGGCTTATCAACAGGGGGTGTACTGAAC
TATTACGACGACAGAGAGACAAGAAGGCTGTCAATAATGAATTCTGAGAAGGATGTGAAG
TCCTTGTCAAACAATGCAGTCAATTTCGAAGAAAATAGAAACATGCATGGAACAGCTGAT
TCAAATCCATCTGCGGTCTTTAGCGTGACTCCTCTGTGCAAACTTCCACTACCTGCCAAC
TATTTACCTGTGAAAAATTTACCCAGTCAGTCAAGTTTCAAGAACTCGAACAAACTACCT
CAACATGTTCTGTATACTCCTTCCTGGCAGATACCATTGGATACATACATGGATATAACT
GGAAATACGAACATACATGCGGGCGGCAACTCCCATTACAATTGTGTAACGGCAAATCAG
ACCGCAAGCATTGCAATGCCTCCTTACTCGACTTATGCACAAATGCCTGCTTCAGTATCC
TCCATACATTCCCCAGCAAATTTTTCAACTCCCGCAAGGACTCCACGGGGAGAAAATGTA
ATGGCGTCACCCGCATCATCTATAGCGACCCCGGCCACTGGCGGACGTGCACATCAGTTG
ACTCCAAGTGTCGCTTCATCAGCAGCTCAGTCAGACATATATGCTTCCCGGGCATCGTCT
ATCTATGTCAACCTTATGTTGTCAGACTCCGTCTTGAACTTGTTCCGGGACGTTTCATTC
GAGCAATGTACGATATGTGTCTGTAATAATAACATCAACGGCAGGGACGTAGACTTAGGA
TATTTACCCTCAATCGCCGACAACCTGCAAGAAGGCCAGTATCCGTGTTCGTGTGGTTTT
AGCGCTGTGAGAAACCGTTGTCTGTCAGTCGGTGCTGGACTGTTTCTCGAAGACGAGCTT
GAGATTGTGGGGAAAGACCTTGAAAACATGATCGTAGAGTCGAGGCGTTATAATCATAAA
ATATCAGACGTTCAAGTTATAAGGTCTGCTATAGAGTTTTCATTGAAACAATCATCCAAT
CCATTCATGAGAGATTTTTCAAGAAAAGAAAATGGTTCCGTCGCTAAGCTTGAGATAAGC
AATATTGCAGTACAACTTGATATCATGGAAGCATGCATGGAGGCAATCAATGGTGGAATT
TCTGTTATGGAAGATGGAATTCAATCAAAGATTAAACTTCATCATTGCAAAGGCGTAGTA
CATCAATGGCATACATCAAGAGATATTCTTATGAAGTCCTCGAGTTCAGCAGATGAGTAT
CGTATCTTGCAGTATTTGAAACCAGTTCTTCAGGACGCCATACAAAAGTTGCGTCCCGAG
CGATCATACAGCTGTACTCAACTGGTGAAAGGTCCCCTAACCTGGCGTGAATTTTGTAAA
GATAATTCTTTTGCATCAGAACCGTTACCTGTTCCTTTACTGCTCGTTGGACATGACCTT
GACTGGATGACTGTTTCACCGTTTGCACTTAACTTCTGGGAAAAGCTCTATTTGGAACCG
TTTGCAGGAGCTACAAATATTGCATACATTGTCGTATGTCCCGATGTTGAAAACGTTCTG
CAGGCTGCCAAATCCTTTTTCTATGAGCTCAGTTCTTTATACGAACATTGTCGACTGGGT
AACCACAAACCATACTTGCGTATCTTGCAAGATTCGGGCTTGCTGAAAGTCAAAGGCAAT
GTATCGAATTCTTCTATTCTACCAGACTGGTACACGCAAATGATAAAAATGATATCTACT
AGTTCTGGCCAGCATGACAGTGATGTGGATGCACTGGAATGTGTTAAGCAATATGCCCAG
GCTTGCACGCAAAACTTAGTTCCATTACTGACTTCACAACCTTCCCTCGCCCTCGCTGAC
CTCTACACTCGTCCACCTCAACAAAGTTTTCACCAAACTGAACCAGGGAACAGCAACAAT
CCAGCAGTTGTGAAACCTGGAATGATAGGTAGCTGTCAGTCTATTAGCAGGCCACCAACT
CCTTTACCTCAACAACAACTGACAAGTCAGAAAGGTGTCCGGGATATCACCCAAGTGAAT
TTAATTGCCAGCAAGCAATGTCCGAGTGACTGTGCGACTATCGTTTTATATTTTGTGGAT
CCATTTTCGAGTAAATGCAATCCTGGCTTTTTGCTTTCCATCTGGAATTGTTACACAGAC
ATTATTAAGTGTTTGCCTGAGCCTTTGAAAAGTTCAGTTGTCTTGCAGCTTGTTCCAGTT
GAAGATATTTTGCAAACATCTAATGCCGTGGGCTCTTCTAGCGCTGGCGTTGTTCGGTCG
CTTGCTTTCAGCTCATATGTTCAGTCCAGAAGGAGAATTCCTCATAATGTACAAGTTCGT
TCCATGACAGCATTTGGCCCTGCCGCGAGCCATAATGAAGCAATTGCCAAGAATATCAAT
AATTTATCCATGTCATCTATATATGCACCGCCTTTTACGCTAGCCATTTTCAAAAACAAG
CAGAGAGATATTCTTGAACAAAGCTCAAAGGATTCAAACATTCTGTATGTTTCTTATTGT
CTCTCCCACGATCAGAAATGGCTACTCGCTTCAGCTTCAGATCAATCTGGTGAAATGCTA
GAGACGTTCTGCGTTAACATAGAGGTCCCACCAAGACGTATCTCACTTCACCGAAGACAG
CGTGCTTGCATCAAAAGTGAGGGGATCCAAAAGCTGTGGAGTTTATGTATGGGTGCTATC
ACACGTACCGCCTTCACGCAATGGCGCATAGTTATTGGACGTCTTGGAAGACTTGGCCAT
GGGGAGATTCAAGAATGGAGCAAGTACCTCAATCGAAGTTCTAATCACAGTGTTATGTCA
GAAAAAGTGCAGCTCAAATGCAATCAGTGCAAATTAAATGGTTCTTCAAAGCACACCAAT
ATTATAAGTGCTTGCTTGACATCGCTAGAACCAGAAGGTTCATTTTCTATATTCCCAGAC
TTCATCAAGTCTATTGGGAGATTCGGTCGATCCACTACTGGAGGCACGCAGATGCAGCTT
AAAACACCAGAAGATGCATCATGCAGTCACATATATGTGTTTCCAACATCTTCTTTTGTT
CAAGCTGCAGGAACAACTTTTCAGAATGGTGATTTTACAGATTACGCATAAAACATTGAA
TTTGGAGATTTGGGGGAAGAATTAGGATTTGCTCTGCCCGACTTAGAACAGGATGATCTT
ACATTTATGGATGCTTTCGATGATCTCACTGACCCAGCAACATCACCAAACAGCCATCCT
CATTCAGCAGATGATGTAAACATGAAGCCAACTGCCTCTGAAAACATGATATCTCAGAAT
GGTGGAGGGGAAGAAACTACGCTTCTGCAGCAACCTCTGGCTTTAGGATATCTTGTGTCA
ACAGCTCCGACTGGTCCACTTCCTGATTGTTTCTGGGCTTCTTGTCCACATGCCAAATAC
AAATGTCCCGTTTTTCTGAAGTTTGCCTTACACATACAAGCAACTAAAAGTGAAGTCCAA
AATGGCAGTGTATCTAATGACAACAATGAGAATTGCCATCAGCTCGATTCACATAGGACA
GCAGAAGTACTAAGATACGTTATGGAAAACTACAATGCATTATCGTGGCTCACATGCAAT
CCTGTAACTCGCGATCGAAGGTCCTGTCTTCCCCTCCATTATTTCGTTCTTGCAAGACTT
TATAATACTGTTCGAGATCTGACATAACTAAATTTCAGGATAAATCGGTGTTGAATTCTA
AATTTATATAAATCTGACTTTGAAAGATAGATGAAACTTATTTGCACTATAGTATTCTAC
ACCACTGACTCTTAAGGAGTAGTATTAAATTGTTT

InterProScan

Pfam
Mediator_Med13_N_met/fun (IPR021643) - T[11-279] 4.2E-55
Pfam
Mediator_Med13 (IPR009401) - T[1515-1849] 3.7E-64

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MD13L_HUMAN 30.199 % 309 1.19E-84
MED13_HUMAN 30.348 % 281 6.21E-76