- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S31.g07310.01.t
Possible name(s)
ACTN1; ACTN2; ACTN4
Gene model
Location
S31 [22,102 / 22,928]
Amino acid sequence
Length: 596
>Harore.CG.MTP2014.S31.g07310.01.p
MFVILPFYHPLRYIGRTETAANRICKVLKVNQENEQLMDEYERLASDLLEWINRMRPWLE
NRTTDNTMEGVQKKLDDFRDYRRHQKPPKAEEKGQLEAAFNTLQTKLRLSNRPAFMPSEG
KMVSDIANAWKGLEGAEKGYEEWLLSEMRRLERLDHLAKKFYHKATIHESWTEGQEERLR
STDYKTCNLQEIKVKDCFSSILRFSSYIQVIHFLSIIQAMSKKHDAFETDLAAHQDRVEQ
IAAIAQELNDLEYHDVATINARCQDICLEWDRLGEATSKRREALLNMEKCLEAIEQLYLE
FAKRAAPFNIWMDGAMEDLEDMFIVHSTEEIKGLITAHEQFKATLSDAEQEKNIIMSLMT
DVEKHKRMYNLPQEIENVYTMLTPEEIDSKWQKVRELVPKRDSSLQMELAKQMNHERLRV
EFATLANKVGPWIQAKTHETIQMTLNIKGSLENNLTNLKIYQQNIQSYQPNIDELEGYHQ
KVQEALIFDNLHTSFTMEHIRVGWEHLKLTVSRTINEITNQILLRDAKGITEEQMNEFRN
SFNHFDRVSGDKFTIFSMLLSFSTSVLCVCLYMNLPSDRDKIVKVSAVLRRMRMGF
Nucleotide sequence
Length: 2,280
>Harore.CG.MTP2014.S31.g07310.01.t
ATGTTGTTTCCGAGAATTGGTGGAACAACTGCATATGGCTTCGGAAATTTATCACATTTA
TATCAAGTTGCTAATTTCTTGGTGGGATGTGGTGAAATGGTGGAAATTCCATATCCAGAT
GAAAAATCTGTAATGACATACGTCTCTTGTTTCTACCACGCCTTCGCAGAAGATATGCCG
GTCGGTTTAACATTGGGCTGTGGCTTTTCGTTGTGTGCTTTTACCTCATTTATCATAACT
CTACTGTATGTGCACTATCATAAATGGTTAGGAACTACTGGAATTTGTGGGATGGAAGTC
CCCTTAGACATCGTGGATATGGTCAAGCCTGACGAGAGATCAATCATGACTTACGTTGCT
GCCTTTTATCATGCCTTATCTGGGAATGATAAGGTACCTTTTCTAATTTCACAACCTTCC
TTGTGTGTTTCATTCATTTCTGCTCTAAGCTTGCTTTACTCGCACTTCCTTGCCTTTCAT
GAGATCTAGATGTTTGTTATTCTTCCATTCTATCATCCTCTCCGATATATAGGCCGTACT
GAAACCGCAGCCAATAGAATTTGCAAGGTGTTGAAGGTTAACCAGGAAAATGAACAGCTT
ATGGATGAGTATGAAAGGCTTGCTTCTGATCTTCTTGAATGGATCAACCGTATGCGCCCA
TGGCTCGAGAATCGTACAACAGACAACACTATGGAGGGTGTTCAAAAGAAATTAGATGAT
TTCAGAGATTACAGGCGGCATCAAAAACCACCAAAGGCTGAAGAGAAAGGACAATTGGAG
GCTGCATTCAATACTCTGCAGACAAAACTTCGACTCAGCAACAGGCCTGCTTTCATGCCA
TCTGAAGGAAAAATGGTATCTGATATTGCCAATGCTTGGAAGGGATTGGAAGGAGCAGAG
AAAGGCTATGAGGAGTGGTTGCTGTCAGAAATGAGAAGATTGGAACGACTTGATCATTTA
GCCAAGAAATTCTACCACAAGGCAACAATCCATGAATCTTGGACTGAAGGCCAAGAGGAG
AGACTTAGGTCCACGGATTACAAGACTTGTAATCTACAAGAAATCAAGGTAAAAGATTGC
TTTTCCTCCATCTTACGATTCAGCAGTTACATACAAGTAATTCACTTCCTATCTATTATT
CAGGCTATGAGCAAAAAGCATGATGCATTTGAAACTGACCTTGCTGCTCATCAGGACAGA
GTGGAACAGATTGCTGCCATCGCTCAAGAACTCAATGACTTGGAATACCATGATGTTGCC
ACTATCAACGCACGCTGTCAAGACATCTGCCTGGAATGGGACAGGCTTGGAGAGGCCACA
AGCAAGCGCAGGGAAGCTTTGCTGAACATGGAGAAATGTTTGGAAGCCATTGAACAACTT
TACCTTGAATTTGCAAAGAGAGCTGCTCCGTTCAATATCTGGATGGATGGTGCCATGGAA
GATCTCGAAGACATGTTTATTGTTCACTCAACTGAGGAAATCAAAGGACTGATCACTGCC
CACGAACAATTCAAAGCTACTCTGAGTGATGCAGAGCAAGAGAAGAACATCATCATGTCA
CTCATGACTGATGTAGAGAAACATAAGCGCATGTACAACCTGCCCCAAGAGATCGAAAAT
GTGTACACGATGCTCACCCCAGAAGAGATTGACTCCAAGTGGCAGAAGGTGAGGGAACTT
GTACCCAAACGTGACAGCTCTCTGCAGATGGAACTAGCGAAACAGATGAACCATGAACGC
CTTCGCGTAGAATTCGCCACTCTGGCCAACAAGGTCGGCCCATGGATCCAGGCCAAGACT
CATGAAACTATCCAGATGACTCTTAACATCAAGGGATCTCTGGAAAACAATTTGACAAAC
TTGAAAATCTACCAACAAAACATTCAATCTTATCAGCCAAACATTGATGAATTGGAAGGA
TACCATCAGAAAGTGCAAGAAGCATTGATATTTGACAATCTTCACACCTCCTTCACAATG
GAACACATCCGAGTCGGATGGGAACACCTGAAATTGACCGTTTCCAGGACCATAAACGAG
ATCACGAACCAGATCCTGCTAAGAGATGCCAAAGGAATCACGGAAGAACAGATGAACGAG
TTCCGCAACTCTTTCAATCACTTTGACCGGGTCAGTGGCGATAAGTTTACTATTTTTTCA
ATGCTATTATCATTTTCTACCAGTGTGTTGTGTGTTTGTTTGTATATGAATTTGCCATCA
GATAGAGATAAAATCGTAAAAGTTTCAGCTGTTTTACGCAGGATGAGAATGGGGTTCTGA
| PANTHER |
Alpha-actinin_1 (IPR026921) - T[4-194] 6.8E-243 - T[213-550] 6.8E-243 |
| Pfam |
Spectrin_repeat (IPR002017) - T[37-145] 9.4E-14 - T[214-285] 3.6E-14 - T[297-406] 1.4E-12 - T[419-517] 2.1E-8 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[39-145] 0.71 - T[159-285] 6.2E-10 - T[299-406] 3.0E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTN2_HUMAN | 61.974 % | 687 | 0 |
| ACTN1_HUMAN | 61.609 % | 692 | 0 |
| ACTN4_HUMAN | 59.091 % | 664 | 0 |