- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S31.g01004.01.t
Possible name(s)
DEPDC1; DEPDC1B; DEPDC4
Gene model
Location
S31 [253,922 / 257,196]
Amino acid sequence
Length: 742
>Harore.CG.MTP2014.S31.g01004.01.p
MENLSTNSVTQRRHADVYRQPFPVYGGDLNCFMSLFRNASNSYGVQYSSSGITVSSLIRV
RAVYCLRRSTNSLFRAICDIVMEMSFTSGKKLTPGPYRATKLWNGIVKQFREKMLSKKHR
RHLRTYNDCFTSSDAIDFLHQLLKINPNIGKEVTRQQTLQLLRKFLKNHVIEDVQGRWGS
ENFDDDGKLFRFPPNISIAQTLRHPLGAISENVAKGKKNAGNKKQKKKAAKTASAKENEA
IAEKETELQSAEIGNADVSVAPEPLKRSLPPLPAAMKCRVFPHIVDASTDEVWKDVLLEK
LTIALELDTLEDVLVKNTVNGEWIKNNATKIGRSGVVQVDKEKDIPYWALSAMTCLANWP
NGKDTGLPCYPGFEKDVFKAVCDYYCCSHNQSSTENNNKMNQSAANRDLPKMQPEPLLSY
GFYELFTNILCLLQPKSEHLAIEALRYGLLLLPTVNRRKLHLLLRLMSKMSHNPHLQKLG
GNVSTRTLLLHTFSRYILSCNEEVYLDELLAMRLVTFLIDHHIEVMKVPSDVERSVQERL
TSRASDSGSEADGSYVQYTFMAPTNGETKPRILLKSISDQTSSTNYSKRKSNDLMKSWDR
LFRQKQSSQNSLNASGKSEEDGSLSGQFNMISDYQPFTRKYSRVKRLRSNTVTNRVLGNG
IHHPSRNYLATSPVPDMNESKMKPAKSCSDIFDMKISPTSVKKFSSKSSELASSSWNLRL
RPSAMFGNPFSKKGKQKSKTDI
Nucleotide sequence
Length: 2,229
>Harore.CG.MTP2014.S31.g01004.01.t
ATGGAAAATCTCTCGACCAATAGCGTTACACAAAGGCGTCACGCTGATGTCTATCGTCAA
CCATTCCCTGTCTACGGCGGCGATTTAAATTGCTTTATGTCGCTCTTTCGCAACGCGAGC
AACAGTTACGGAGTACAGTACTCGTCTAGTGGTATCACAGTAAGTTCCCTTATTCGTGTA
CGTGCTGTATACTGCTTACGTCGCTCAACAAACAGTCTGTTCAGAGCTATTTGCGATATC
GTGATGGAGATGAGTTTCACCAGCGGCAAGAAATTGACACCGGGACCGTACAGAGCAACC
AAGTTATGGAACGGAATAGTTAAACAATTTCGTGAGAAAATGCTGTCGAAAAAACACCGA
CGTCATTTGCGAACTTATAACGATTGCTTTACCTCCTCCGATGCAATCGATTTTTTGCAT
CAGCTATTGAAAATTAACCCGAACATTGGCAAAGAAGTAACTAGGCAGCAGACTCTACAG
CTGCTACGGAAATTTCTTAAAAATCACGTGATCGAAGACGTGCAAGGCAGATGGGGAAGC
GAAAATTTCGACGATGACGGAAAACTCTTCCGATTCCCGCCAAACATTTCAATTGCCCAA
ACGTTGCGACACCCGCTTGGTGCGATAAGCGAAAACGTTGCGAAAGGCAAAAAGAATGCT
GGAAATAAGAAACAGAAGAAAAAGGCCGCGAAAACAGCAAGTGCCAAGGAAAATGAAGCA
ATTGCAGAAAAAGAAACCGAACTCCAATCAGCCGAAATCGGTAACGCTGATGTATCGGTA
GCGCCCGAACCCCTGAAACGCTCCCTGCCACCTTTACCAGCTGCCATGAAATGTAGAGTT
TTTCCGCATATAGTGGACGCCAGTACGGACGAGGTATGGAAAGACGTCTTGCTAGAAAAA
CTGACAATCGCCTTGGAACTGGATACGCTCGAAGATGTACTAGTGAAAAATACAGTAAAC
GGCGAATGGATAAAAAATAATGCAACGAAAATTGGAAGGTCTGGCGTAGTACAGGTAGAC
AAAGAAAAAGATATCCCATATTGGGCTCTCAGCGCCATGACCTGTCTTGCAAATTGGCCG
AATGGCAAAGATACTGGACTTCCGTGTTACCCTGGTTTTGAAAAAGACGTGTTTAAAGCT
GTTTGTGACTATTATTGCTGTAGTCATAATCAATCATCGACCGAAAACAATAACAAGATG
AATCAATCAGCTGCCAATCGTGATTTGCCTAAGATGCAACCTGAGCCACTTTTGTCATAC
GGTTTCTATGAACTGTTCACAAATATTCTTTGCTTACTGCAACCGAAATCCGAACACCTT
GCCATCGAAGCTTTGCGCTACGGCTTATTATTGCTTCCGACAGTGAACAGACGAAAATTG
CATCTGTTGTTGCGCTTAATGTCGAAAATGAGTCACAATCCTCATTTACAAAAGCTTGGC
GGAAATGTTTCGACCAGGACACTCCTACTCCATACCTTTTCTCGTTACATCCTCTCCTGC
AACGAAGAAGTGTACCTAGATGAACTGTTGGCTATGCGCCTCGTGACTTTCTTGATAGAT
CATCACATAGAGGTGATGAAAGTTCCGTCTGATGTGGAACGTAGCGTTCAAGAGCGTCTG
ACGTCGAGAGCGAGTGACAGTGGCTCCGAGGCAGATGGCTCATACGTACAATACACATTC
ATGGCTCCCACGAACGGCGAAACGAAACCTCGCATTTTGTTGAAAAGCATCAGTGATCAG
ACATCGTCAACCAATTATAGCAAACGGAAGTCTAACGATCTTATGAAATCGTGGGACAGA
TTGTTTCGACAGAAGCAATCGTCCCAAAACTCCTTAAATGCGTCTGGCAAATCCGAAGAA
GATGGAAGCTTATCGGGACAGTTCAATATGATTTCGGATTATCAACCCTTCACTCGCAAA
TACTCTCGAGTGAAACGCTTGCGAAGCAACACCGTTACTAACAGAGTGCTTGGAAACGGA
ATCCACCACCCTTCCAGAAATTATTTAGCCACGTCACCAGTGCCAGATATGAACGAATCG
AAAATGAAACCTGCAAAGTCCTGTTCGGATATTTTCGATATGAAAATTTCACCTACCTCG
GTAAAAAAGTTTTCTTCAAAGTCTTCAGAGCTCGCATCCTCTTCGTGGAATCTGAGATTA
AGGCCGAGCGCCATGTTCGGAAATCCTTTTAGTAAGAAGGGTAAACAAAAGTCAAAGACG
GACATATAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[92-194] 6.1E-33 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[99-206] 2.23E-18 |
| SMART |
DEP_dom (IPR000591) - T[110-194] 1.5E-18 |
| Pfam |
DEP_dom (IPR000591) - T[116-192] 1.5E-14 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[337-526] 10.645 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[409-539] 3.2E-9 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[414-528] 1.41E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DEP1B_HUMAN | 40.57 % | 323 | 3.93E-102 |
| DEP1A_HUMAN | 38.235 % | 238 | 9.34E-68 |
