- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S318.g10822.01.t
Possible name(s)
TAF3; TAF8
Gene model
Location
S318 [55,813 / 61,789]
Amino acid sequence
Length: 302
>Harore.CG.MTP2014.S318.g10822.01.p
MEPVGETLNFLVFVKRLYCSIDWEMYHDVSPTLEVFRQALEASVNAICMDEGFTGITKSA
LETLTEITESYLTEIGRGTRQYCEIGGRTNPTFCDVQSALADAGFKIKDIPSYLRAKRMC
IAMVPKSSPGSAPNVLLVGERKGFPSYIPENLKYPKFPDPHTYVRTLTGQEMENNYSILR
ENASAQKWDVERALTRFIAKTGNSHPLLTDDRNAFPLIAAVPTPIPYLLAVLNVAEEQAE
ISKSNEEDNSNQQTDRNDKSKSKTHSASDKTQHSGQNKKLEEVIDNPYLRVAKTSKLKKR
PH
Nucleotide sequence
Length: 1,602
>Harore.CG.MTP2014.S318.g10822.01.t
ATGGAGCCCGTAGGGGAAACCCTTAATTTTTTGGTATTTGTGAAAAGACTGTATTGCAGT
ATTGACTGGGAAATGTATCATGATGTATCTCCTACACTAGAAGTGTTTAGACAAGCTTTA
GAAGCATCTGTCAATGCAATATGTATGGATGAAGGTTTCACAGGGATTACGAAGTCGGCC
TTAGAGACTTTGACTGAAATAACAGAAAGCTATCTTACAGAAATTGGTCGAGGCACACGA
CAGTATTGTGAAATTGGTGGAAGAACTAATCCAACTTTTTGTGATGTACAGTCTGCATTA
GCAGATGCTGGATTCAAGATTAAAGACATTCCTAGCTACTTGAGAGCGAAACGAATGTGC
ATTGCTATGGTTCCAAAATCATCGCCAGGATCAGCACCTAATGTTCTTCTCGTCGGCGAA
CGGAAAGGCTTTCCATCTTACATTCCTGAGAATTTAAAGTATCCAAAATTTCCTGACCCA
CATACTTACGTCCGAACACTGACCGGTCAAGAGATGGAAAACAACTACAGTATACTACGG
GAAAATGCCTCTGCGCAGAAGTGGGATGTGGAAAGGGCTCTAACACGATTCATAGCTAAA
ACTGGCAATAGTCATCCTTTGCTTACAGATGATAGAAATGCTTTCCCATTGATTGCTGCA
GTTCCAACACCTATTCCATATCTGTTGGCAGTGCTAAATGTGGCTGAAGAGCAGGCTGAG
ATAAGTAAAAGCAATGAGGAAGATAATTCAAACCAGCAAACTGATAGAAATGATAAATCA
AAATCCAAGACTCATTCAGCATCAGATAAGACTCAACACTCTGGTCAAAATAAAAAATTG
GAAGAGGTGATAGACAACCCATATCTACGGGTTGCTAAAACTTCGAAACTGAAGAAACGT
CCTCACTGAAAGAATTATCATCTATTGAAACATGATAAAATGTCGAGGAACTCTCCAGTA
GCTGAATTGTGTGAACAGTCATTAGATCTTCTTTGACTACTAATGATGAACTGCTGTAGC
CAGTGCCGGATTGAGGCTTTGCTGGCCCTAAGGCACATTTTGATAGGTGGCCTGAAAATA
CAAATATTTTGGGTGCACCTATATAAGGAAGAAGGATAAACGCGTAAATGAAGAAGAATG
GCATTTATATACATAAAAATAAAAAAAGCATTTTTGTCATCACGTGATAATTATCAATTT
TTATTTTTTTGTGGCTTGGATTTTTAGCTGGATTTCATTTTCATTCAGTTGAGTACACAA
TAAATCCCTCTATAGGGCCTATAGCGTCCTATTCAATAGTTTATCTTGTTTTCAAATAAG
ATACATACTCTTATAGAATTTCTGGTCCCATGAAAATAGAGTATATTGCTGCCCCATGGA
ACCATTTTCTTATCAAGGATTTGTTCTGTTATGGGTGAGGGTTCTTTAAATGGCGGACAT
GATTTGTCGTTATTAAGTTATTGTGTTAATTAGGGAATAACAGCATTTGGCAATCGCCGC
AGCACAACCATTTCTATATTTGTTCGTGGACAATATATGGATCCTCTTTTTTGGTAAGAG
TTTTTAAATGGTGTCGCACTAGAGCAGTGGCTTTTAACCTGG
| Gene3D |
Histone-fold (IPR009072) - T[31-122] 6.7E-23 |
| SMART |
BTP (IPR006565) - T[33-109] 2.7E-15 |
| Pfam |
BTP (IPR006565) - T[36-108] 1.2E-17 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[43-105] 1.7E-6 |
| CDD |
TFIID_su8_C (IPR019473) - T[146-201] 6.21084E-15 |
| Pfam |
TFIID_su8_C (IPR019473) - T[147-197] 8.9E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF8_HUMAN | 39.209 % | 202 | 1.7E-63 |
