Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S30.g12245.01.t

Possible name(s)

THNSL1; THNSL2

Gene model

Harore.CG.MTP2014.S30.g12245

Location

S30 [277,055 / 281,000]

Sequences

Amino acid sequence

Length: 485

>Harore.CG.MTP2014.S30.g12245.01.p
MEYTYTRCNIKTISFEQALFSGIAADGSLIVPKTIPQVDLKTLIKWKNLSYVEIVKQVVS
LYVSSNEIPRKDQEALIDNAFAKFDIPEVVRKKTFGDLNVMELWHGPTLAFKDLAMSCVG
EFINYFLSKKKKHVIVLVATSGDTGSSAIEAMHGKDNVDIIVLLPHKKISIVQELMMTTV
LESNVHVYAGEGVSDEFDAILKKLFSDGEFASKNNLCSINSINWGRVMVQIAHHIFMYLQ
VAQKIGEPVDIIVPTGGCGNITSGLYAQAMGVPIKFVCVVNQNDIVHRAVSNNDFSLADT
VVQTIASAMDIQVPLQFERIFWIVSKGNSEIVKEIMETFEKEGKATIPDDLYCELKRSIR
TAVVMHNDIIKAMNRCHADNKYIACPHTCTAMAYHYGFSEYGTRKTTGTRRADNSLVPAV
CVGTASAAKFPEVVEKAGLKPDEPPETVKALFKKASRFCLLRKGDDWEKMMRDKILSVKH
HHQLV

Nucleotide sequence

Length: 1,849

>Harore.CG.MTP2014.S30.g12245.01.t
ATAACGTCCAACTTGCTGAATCGCGTTTTTTTTGCTGCAATACAAACATATGTAGTTAGT
ATACACACTGTGTATTGACATAGTAGCCTTCGAACAGGAAGGAAAAAACAATTCGATTCT
CGCTGCTGCAATAAAATACTGCTACAATGGAGTACACCTACACCAGATGTAATATAAAAA
CTATAAGTTTTGAACAAGCTTTGTTTTCTGGTATCGCTGCAGACGGCTCACTGATTGTAC
CGAAAACTATTCCTCAAGTGGATTTGAAGACATTGATAAAATGGAAAAACCTTTCCTACG
TGGAGATTGTCAAACAAGTCGTCTCTCTATACGTCTCATCGAACGAAATTCCAAGAAAAG
ATCAAGAAGCCTTGATCGACAATGCGTTCGCAAAATTTGACATCCCAGAAGTCGTAAGGA
AGAAAACTTTCGGCGATCTCAATGTCATGGAGCTTTGGCACGGACCAACATTGGCTTTCA
AAGACCTTGCAATGTCCTGTGTTGGAGAATTCATTAATTACTTTTTATCGAAGAAGAAGA
AACACGTCATCGTGTTGGTCGCTACCTCAGGAGACACTGGTTCTTCTGCTATTGAAGCTA
TGCATGGCAAGGATAATGTTGACATCATAGTTCTTCTTCCACACAAAAAGATTTCTATAG
TACAGGAGCTCATGATGACTACAGTACTGGAAAGCAATGTTCATGTATATGCTGGAGAAG
GAGTCAGTGACGAATTTGATGCAATACTGAAGAAATTATTCTCCGATGGTGAATTTGCAT
CGAAGAACAATCTTTGCAGCATTAATTCAATCAACTGGGGCAGAGTGATGGTCCAGATAG
CACATCACATTTTTATGTATCTGCAGGTCGCCCAGAAGATTGGAGAACCTGTTGATATTA
TTGTGCCGACAGGAGGATGTGGCAACATCACTTCGGGATTATACGCACAAGCTATGGGCG
TTCCTATAAAGTTTGTCTGTGTTGTCAATCAGAATGATATTGTGCACAGAGCTGTATCAA
ATAATGATTTCAGTTTGGCGGATACAGTGGTCCAAACAATTGCATCTGCGATGGACATAC
AGGTACCACTTCAATTCGAACGCATTTTTTGGATTGTTTCTAAGGGAAACTCAGAAATCG
TCAAAGAAATAATGGAAACGTTTGAAAAAGAGGGAAAAGCAACTATTCCTGATGATTTGT
ATTGCGAGTTGAAGAGAAGCATCAGAACTGCTGTTGTGATGCACAATGACATTATCAAAG
CTATGAATAGATGCCATGCAGATAACAAGTATATAGCTTGTCCTCATACGTGTACAGCAA
TGGCATATCACTACGGATTCTCTGAATATGGTACTAGAAAAACTACTGGAACCCGGCGAG
CAGATAACAGTTTGGTTCCTGCCGTTTGCGTCGGGACCGCGTCCGCTGCCAAGTTTCCAG
AAGTGGTGGAAAAGGCAGGTTTGAAACCAGACGAGCCGCCAGAAACGGTAAAGGCACTGT
TCAAAAAGGCCTCGAGATTCTGCCTTTTGAGAAAAGGGGACGACTGGGAAAAAATGATGC
GGGATAAAATTTTATCTGTGAAGCATCACCATCAACTTGTGTGATCTACATTGATGAACA
AAAGAAATATTTTGACAGTTTTACTATATATAGTCAATTGCTTTTAATATAATTGTACAT
TTGAAGTCATGAAATTAGAATGTCTTCCAAATTTTGTATTTTGCATCTCTACTTACCACG
AAATGAACCGTGTATTGAAGAAAAGTTGGTGTAAATTAAATACGATATTTTCACTCAAAT
GAGTAAACCAAATGTCTTATTTGGGATTATTCTGGTATCTGAAGTACGG

InterProScan

Gene3D	Thr_synth_N_sf (IPR037158) - T[1-86] 9.6E-22
SUPERFAMILY	Trypto_synt_PLP_dependent (IPR036052) - T[1-461] 1.01E-120
Pfam	Thr_synth_N (IPR029144) - T[3-81] 1.7E-19
TIGRFAM	Thr_synthase-like (IPR004450) - T[67-435] 3.7E-58
Pfam	PLP-dep (IPR001926) - T[104-393] 1.3E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
THNS2_HUMAN	46.458 %	454	4.6E-157
THNS1_HUMAN	27.193 %	169	1.47E-45