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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S30.g09710.01.t

Possible name(s)

DHRS13; RDH11; RDH12

Gene model

Harore.CG.MTP2014.S30.g09710

Location

S30 [124,599 / 125,595]

Sequences

Amino acid sequence

Length: 331

>Harore.CG.MTP2014.S30.g09710.01.p
MDLDTFTIFITVSVVGAIAAWVKFVKTGPVCKSSTLLTGRTVLITGGSAGIGMATAIELA
KRKARIIIACRNEEKGTKVLEEIKRESGSCLVHLMKLNLSDFDSIKEFVKDFTQTEARLD
ILINNAAAFGVGVTTQRHDLMFGTNQLGPFLLTNLLMPIMKKQAEWRPVRIVNVCSKAYK
FGKVDLKNLNPFGSVIPNPMQVFVQYANTKLMNVYFTTELNKQLRKDNPGSNAITTYAVH
PGTIGSRLGADYADSSVLLRLIRPCFIFITSRSIFYGCQTTLHCCLSEGIEEDSGKYFSN
CAKEKLLPHATDPELGRALWEKCVELTGLDS

Nucleotide sequence

Length: 996

>Harore.CG.MTP2014.S30.g09710.01.t
ATGGATTTAGACACCTTTACAATCTTCATCACCGTGTCTGTAGTCGGGGCTATTGCAGCT
TGGGTGAAATTTGTTAAAACAGGACCGGTATGTAAGAGCTCCACTCTCCTGACCGGAAGA
ACCGTACTTATAACCGGTGGCAGCGCGGGTATCGGCATGGCGACCGCTATCGAGCTCGCT
AAACGAAAAGCAAGGATTATCATTGCTTGCAGGAATGAAGAGAAAGGTACGAAAGTGTTG
GAGGAAATTAAAAGAGAAAGTGGGAGCTGTTTGGTTCATTTGATGAAGCTTAACCTGAGT
GATTTCGATAGCATAAAAGAATTCGTGAAAGATTTCACACAGACAGAGGCAAGACTCGAC
ATCCTTATCAATAATGCCGCTGCATTCGGTGTGGGAGTCACCACGCAAAGGCACGATCTC
ATGTTTGGAACAAACCAACTAGGTCCCTTCTTGTTGACCAACTTGCTGATGCCAATCATG
AAAAAGCAGGCAGAATGGAGGCCGGTGAGGATCGTGAACGTGTGTTCGAAGGCTTATAAA
TTCGGAAAGGTCGACCTGAAGAACCTTAATCCGTTCGGATCCGTTATTCCGAATCCGATG
CAAGTTTTTGTGCAATACGCTAATACCAAGCTAATGAATGTCTACTTCACCACCGAGCTA
AATAAACAACTGAGGAAGGACAATCCTGGATCAAATGCTATAACTACATACGCCGTCCAT
CCTGGTACAATCGGCAGTCGCTTGGGAGCAGATTATGCTGACAGTAGTGTTCTCCTACGT
CTCATCAGGCCGTGCTTCATATTCATCACCTCGCGCTCCATTTTCTACGGATGTCAGACG
ACTCTACACTGCTGTCTTAGCGAAGGCATCGAGGAAGACTCAGGGAAATACTTCAGTAAC
TGTGCCAAAGAGAAGCTTCTACCCCACGCTACGGATCCTGAATTGGGGAGAGCTCTTTGG
GAGAAGTGTGTGGAGTTAACAGGACTTGATAGTTAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[37-301] 2.79E-45
Pfam
SDR_fam (IPR002347) - T[41-180] 1.9E-25
PRINTS
SDR_fam (IPR002347) - T[41-58] 3.0E-10 - T[117-128] 3.0E-10 - T[232-249] 3.0E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 38.835 % 179 7.3E-54
DHR13_HUMAN 39.735 % 192 1.3E-58
RDH12_HUMAN 39.474 % 176 4.69E-53