- Transcript 'KH2012:KH.C5.63.v2.A...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S30.g06694.01.t
Possible name(s)
NPLOC4
Gene model
Location
S30 [7,276 / 12,594]
Amino acid sequence
Length: 568
>Harore.CG.MTP2014.S30.g06694.01.p
MIIRVQSKDGTKRIEASSSETVVSFLSKVGKEFGLDGGSSWRIYQDRSRKSELKKNSKSK
LSSKKLKHGDMCYLYFTDGINVAGDEAEEESEPGPAVKVTEDDIDTELWKQDGRIPQGSR
GSGGGMFKIDDLPLNPWDESYLQEKEIKFKSFHAHMRQQTSGVDKGKYLKLESTRTACKL
DSGEGKRSLLDLPTAITLNQQKFRHVDNIMFENREIADRFLDYWRSTGAQRVGFMYGRYT
QHKEVPLGIKAEVCAIYEPPQESSTNSLRLLEDPHEKIITKIACTLGLQKIGWIVTDLVA
EDRTKGTVKHFRDAETHFMTAEECILAGEFQNQNPNPCRLAKDGYYGSKFVTVIVSGDKT
NQISFEGYQVSNQCMDLVRDGCLIPTIDAPELGYIRESTQDLYVPDVYYKMKDEYGNEIT
KLARPLPLAYLLLDVPAAFAIETQYTCSRPKDSFVIANRQSLGEIQNLEKLSAQLDKSSP
DGFLATMSDFHLLVYLAKMENFQIGDALDPLLEAIKEKNNDKALEWSKNAAWVSLQHDMR
QQASVQGASGMDMDPELREAIARSLMET
Nucleotide sequence
Length: 2,458
>Harore.CG.MTP2014.S30.g06694.01.t
TGATCACTCACCGCACATAGAACTTGTGCGTTATTGTTGGCGGCTGTAATCTTTATCGCT
CTCTTTTCATGGGAAATTTAAACCAGGGAAATTCTAGCCGCCAAGGTTCTCGAAGTGAGT
TCATGTCGACTAGGATAATAATATTCGTGAATAAAGTGAAGGTAAGGGGCAATTTATTAA
TTGCTGAGGGAATAAATCTAGTAAAGCGTCGAATTAATATATCTAGAGCCAAAAAAGTTA
CTAGATTTGAACTTGATTTGATCAAGGACACCGATAAATTAGTTTTCAAGTAAAAATGAT
TATTCGAGTGCAGTCGAAAGATGGAACGAAACGCATCGAAGCGTCGTCTTCGGAAACCGT
AGTTTCTTTTCTGAGCAAAGTCGGAAAAGAATTCGGACTGGACGGCGGCAGCAGCTGGAG
AATCTATCAAGACAGAAGCAGAAAATCGGAACTGAAAAAAAATTCCAAATCAAAATTGAG
TTCGAAAAAATTAAAACATGGCGACATGTGTTACCTTTACTTCACAGACGGTATCAATGT
CGCTGGTGACGAAGCAGAGGAGGAATCTGAGCCAGGACCAGCAGTCAAGGTTACCGAGGA
TGACATCGATACTGAACTCTGGAAACAAGATGGTCGGATCCCACAGGGAAGCAGAGGTTC
AGGAGGAGGGATGTTTAAAATTGATGATTTGCCATTGAATCCATGGGACGAATCTTACCT
GCAAGAAAAAGAAATTAAATTCAAATCGTTTCATGCCCACATGAGACAGCAGACGTCTGG
AGTGGATAAAGGAAAATATCTTAAACTTGAATCGACAAGAACTGCATGCAAACTTGATTC
GGGCGAAGGGAAGAGGTCTTTGCTGGACTTACCGACCGCTATAACTCTGAATCAGCAAAA
GTTTCGGCACGTGGACAATATTATGTTTGAAAACCGAGAGATCGCAGACAGATTTCTTGA
TTATTGGAGAAGCACAGGTGCTCAGAGAGTTGGATTCATGTATGGACGATATACACAACA
CAAGGAAGTTCCCCTCGGTATCAAAGCAGAAGTTTGTGCAATATACGAACCCCCGCAAGA
AAGCTCAACAAACTCATTAAGATTACTGGAAGATCCCCACGAAAAAATCATAACTAAAAT
TGCTTGCACTCTTGGGCTGCAGAAAATTGGTTGGATCGTGACAGACTTGGTCGCTGAAGA
TAGAACAAAGGGTACCGTAAAGCATTTCCGCGATGCGGAAACCCATTTCATGACGGCTGA
GGAATGTATATTGGCAGGCGAATTCCAGAATCAAAACCCTAACCCATGTAGACTGGCAAA
AGATGGATATTATGGATCCAAATTTGTCACTGTTATTGTTTCGGGTGATAAAACTAATCA
GATTTCATTTGAAGGTTATCAGGTGTCAAATCAGTGCATGGATTTGGTCCGCGACGGATG
TCTGATACCGACAATAGATGCCCCAGAACTCGGCTACATTCGAGAGAGCACTCAGGATTT
GTATGTGCCCGATGTTTATTATAAAATGAAAGACGAATACGGAAATGAAATCACAAAACT
TGCGAGACCATTACCGCTGGCCTACCTTCTACTTGATGTACCAGCTGCATTCGCAATCGA
GACTCAGTACACATGCAGTCGTCCAAAGGATTCTTTTGTTATAGCGAACAGGCAATCTTT
GGGCGAGATACAAAACTTAGAAAAATTGTCTGCGCAATTGGATAAATCAAGTCCGGATGG
ATTTCTAGCGACGATGTCTGATTTCCATTTGCTCGTGTATTTGGCAAAGATGGAAAATTT
TCAAATCGGTGACGCACTCGATCCCTTGCTTGAAGCCATTAAGGAAAAAAATAATGACAA
GGCATTGGAATGGAGTAAAAATGCTGCTTGGGTTTCTCTACAACATGATATGCGGCAGCA
GGCCTCGGTGCAAGGTGCCTCTGGCATGGATATGGATCCTGAACTACGTGAAGCAATTGC
ACGTAGTTTAATGGAAACTTGATAGAGATCAACAGTGTTCCAACAATATCACAGTGAAAA
CAAAGTTCCTTCGATTGACTGATTCTTTTGAAGTATTATTAAAAAATTGTTCAGAGTTTC
AGATATTTAGTTTTATTTGAAAACAAATTGGTTGACGTACAGGTAGATGGCACAGGAGGC
AGAAAATAGTTATCGACTTGTTTAAATGTAACGTGCAAAAAGGATGGTAGTGAGGTGATG
ATTTGTATATAAAGTACTTTTGAATAAGTTCAAGTAGGAACATGAGTATTTACAACTGTA
GATACGTTATAACACGGCTTGATATGGGCACAGGAGGCAGAAAATAGTTATCGACTTGTT
GAAATGTAAAGTGTAAATTGGATGGTAGTGAGGTGATGATTTGTATATGAAGTAATTTTG
AATAAGTTCGTAGGAAAATGAGTATATACAACTGTAGATACGTTATAATACGGCTTGA
| PIRSF |
Npl4 (IPR016563) - T[1-543] 2.0E-148 |
| Pfam |
Npl4_Ub-like_dom (IPR024682) - T[1-75] 5.4E-20 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 2.27E-6 |
| Pfam |
NPL4_Zn-bd_put (IPR007716) - T[99-228] 3.3E-26 |
| CDD |
NPL4_C (IPR007717) - T[197-496] 8.55868E-124 |
| ProSiteProfiles |
MPN (IPR037518) - T[209-346] 19.294 |
| Pfam |
NPL4_C (IPR007717) - T[231-536] 1.7E-108 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPL4_HUMAN | 48.741 % | 540 | 0 |