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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S30.g00054.01.t

Possible name(s)

DNAJA3; DNAJC16

Location

S30 [190,257 / 191,444]

Sequences

Amino acid sequence

Length: 250

>Harore.CG.MTP2014.S30.g00054.01.p
MLSVKRVSLIRNGICCEIFDCVASKIPTEIIYHKPTNSRIFKREKSSIRQCYFTTNTHGY
SQTNAGNETRSFDPYQILGIESGASLKDVKEAYIRLSRVYHPDFNTGDKHSETKFILITE
AYRKITEKLAAESETHEEDGRKEKKLYDFTIAPLGVETEPMEERKFINWKKLSLFAVGIW
LTYYIKANCLSDMKYFMQDFFWPEPSEYEYMKATKDKIRKTLLKEASEQREKDKLLRSAK
EAMYGARKEN

Nucleotide sequence

Length: 753

>Harore.CG.MTP2014.S30.g00054.01.t
ATGTTATCTGTAAAAAGAGTGAGCTTGATAAGAAATGGAATATGCTGTGAAATATTCGAC
TGCGTTGCTTCGAAAATTCCAACTGAAATAATTTATCACAAACCCACAAATTCAAGAATT
TTTAAAAGGGAAAAGTCCTCGATTAGACAATGTTATTTCACTACGAATACACACGGATAT
TCACAAACTAATGCAGGCAATGAAACTCGTTCCTTCGATCCCTATCAAATTCTTGGAATT
GAATCTGGAGCGTCTCTGAAAGACGTCAAGGAAGCTTATATACGACTGTCACGGGTTTAT
CACCCAGATTTTAATACGGGAGATAAACACAGCGAAACAAAATTCATATTAATCACAGAA
GCATATCGTAAAATTACTGAAAAGCTTGCCGCAGAAAGTGAAACTCATGAAGAAGATGGG
AGAAAGGAGAAAAAGCTGTACGACTTCACGATCGCACCACTCGGAGTTGAAACGGAGCCC
ATGGAAGAAAGAAAATTTATCAATTGGAAAAAACTTTCGTTATTTGCAGTTGGTATTTGG
TTGACTTATTACATAAAAGCAAACTGCCTCTCCGATATGAAATATTTCATGCAGGACTTT
TTCTGGCCAGAACCATCAGAGTATGAATATATGAAAGCAACCAAAGATAAGATAAGGAAA
ACTCTGCTGAAAGAAGCGAGCGAACAACGAGAAAAAGATAAATTACTACGTAGTGCTAAA
GAAGCAATGTATGGAGCGCGCAAAGAAAATTAA

InterProScan

Gene3D
J_dom_sf (IPR036869) - T[57-153] 1.2E-16
PANTHER
Sec63 (IPR027137) - T[62-133] 3.5E-18
SUPERFAMILY
J_dom_sf (IPR036869) - T[69-126] 1.83E-16
SMART
DnaJ_domain (IPR001623) - T[72-130] 1.9E-16
CDD
DnaJ_domain (IPR001623) - T[73-123] 5.33059E-16
ProSiteProfiles
DnaJ_domain (IPR001623) - T[73-151] 14.561
Pfam
DnaJ_domain (IPR001623) - T[73-125] 4.9E-14
PRINTS
DnaJ_domain (IPR001623) - T[75-93] 2.9E-10 - T[93-108] 2.9E-10 - T[110-130] 2.9E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value