- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S30.g00048.01.t
Possible name(s)
GALNT1; GALNT13; GALNT4
Gene model
Location
S30 [144,852 / 158,173]
Amino acid sequence
Length: 518
>Harore.CG.MTP2014.S30.g00048.01.p
MVKICGRRYCKVILTTSLFWLMVDVFFIFYFTDCKTNCPSNSKDTKDLGGGGGAADFIAN
KVIPAIGNALPSFNSNPKGPGEMGKAVIIPKDREKEKLDKFKINQFNLLASEMISVNRSL
PDVRMDGCKKKTYPKKLPKTSVVIVFHNEAWTTLLRTVHSIINRSPREYLEEIILVDDAS
ERDFLGKPLEDYVKTLSVRTLVVRMGKRSGLIRARLKGASTSVGQVITFLDAHCECTEGW
LEPLLAEIAKDSSTVVCPIIDVISDETFEFLVGSDMTYGGFNWKLNFRWYPVPQREMDRR
HNDRSLPVRTPTMAGGLFSIDRDYFAKIGTYDAGMDIWGGENLEMSFRIWQCGGTLLIVT
CSHVGHVFRKATPYSFPGGTGHIINKNNRRLAEVRNEQTGFCLDTMARKENDKVGMFNCH
SMGGNQVWAYTGNKEIRTDDLCLDVSKMGGPVMMVKCHHLKGNQLWEYDDDTHLLKHTNT
GQCLGKIKEGGQVPSMQRCDNSDTSLRWLLKTMEMNFR
Nucleotide sequence
Length: 2,016
>Harore.CG.MTP2014.S30.g00048.01.t
GATCAGTCGGTTAGAAGTCGCCAAGCAGTCAACACTGCCAATAATATATGAACTGATTCG
CTATACACAGAACAGTGTAGATTGTTATCAAGACTTATATCATCAGGAACTTTGAATAGG
TCCGTGTAAACAAAAAGTTATAGCCGGCTCTCTACGTGTCTTCAACGTATTAACATCCAC
GTCTGTAACGGCGGATATAAAACTCATATATTTTTCCTAACGGGATTTAAAAGATGGTAA
AAATATGCGGGCGAAGATATTGCAAGGTTATTCTGACGACCTCCCTTTTCTGGTTAATGG
TTGATGTTTTTTTCATATTTTATTTCACCGACTGTAAAACCAATTGTCCCAGCAACAGCA
AAGACACAAAAGACCTTGGAGGTGGTGGTGGTGCAGCTGATTTTATAGCTAATAAGGTTA
TACCTGCTATTGGAAATGCCCTTCCAAGCTTCAACAGCAACCCCAAGGGACCCGGGGAGA
TGGGCAAGGCAGTCATCATACCGAAAGACAGAGAAAAGGAAAAACTAGACAAATTTAAAA
TAAATCAGTTCAATCTGCTCGCCTCGGAAATGATCTCGGTCAACCGGTCATTACCTGATG
TTAGGATGGATGGGTGCAAAAAGAAAACTTATCCCAAAAAACTCCCAAAAACTTCCGTTG
TAATTGTGTTTCATAATGAAGCATGGACCACATTACTTCGTACAGTACACAGTATTATAA
ACAGGTCTCCAAGGGAGTATTTGGAGGAAATTATTCTTGTTGACGACGCAAGTGAAAGAG
ATTTTCTTGGCAAACCGCTGGAGGATTATGTCAAAACATTGTCTGTACGAACACTTGTGG
TACGGATGGGCAAACGTTCGGGACTTATCCGGGCCCGGTTAAAGGGGGCTTCCACCTCTG
TGGGACAGGTCATTACGTTCCTCGACGCTCACTGTGAATGCACTGAAGGGTGGCTCGAGC
CTTTATTAGCAGAAATTGCAAAAGATTCATCAACCGTGGTGTGTCCTATCATTGACGTTA
TTAGCGATGAAACTTTCGAATTTTTAGTCGGATCCGATATGACTTACGGAGGATTTAACT
GGAAACTCAACTTCCGTTGGTATCCTGTTCCTCAGAGAGAAATGGATAGAAGGCATAACG
ACCGTTCTTTACCTGTGAGGACGCCTACGATGGCCGGCGGATTGTTCTCAATCGACCGGG
ATTATTTTGCGAAGATCGGGACTTACGACGCGGGGATGGATATCTGGGGTGGCGAAAACT
TGGAAATGTCTTTCAGGATTTGGCAGTGCGGTGGTACCTTGCTAATCGTGACATGTTCTC
ACGTTGGTCACGTCTTCCGCAAAGCGACACCTTACTCCTTTCCAGGTGGAACGGGTCATA
TCATCAACAAGAACAATCGGAGATTGGCAGAAGTGCGGAATGAACAGACCGGTTTCTGTC
TCGATACCATGGCGAGGAAAGAAAACGACAAAGTCGGAATGTTCAATTGCCACAGTATGG
GTGGCAATCAGGTGTGGGCTTACACTGGAAACAAGGAAATTCGTACAGATGATTTGTGTT
TGGACGTGTCCAAGATGGGCGGCCCGGTAATGATGGTCAAATGCCATCATTTGAAGGGAA
ATCAGCTCTGGGAATATGATGATGATACTCATTTATTGAAGCACACAAATACCGGACAGT
GCCTTGGTAAAATAAAAGAGGGCGGGCAGGTTCCCTCGATGCAAAGATGTGATAATTCGG
ACACTTCCTTACGTTGGCTTCTGAAAACTATGGAAATGAATTTTAGATGATGAAAAAGAT
CTTTATGAACAAAGATAGTCGGATCCTCCTCTCTTGCTTCAAAAAAAAATTTCATCATCA
GTGGTCAGCCGGCCAGGGGCTTTCTAGTAAAAGGGGCGAATCGTCAAATTTCAACCGAAT
CAAGAAACCGGAATATTTATGTTCTCTCAGATAATTATCCTTACTTTGAACTACCAGATT
AATCGACCTGAAAGGGAAGGGGGGTGAGATGTCTAG
| SUPERFAMILY |
Nucleotide-diphossugar_trans (IPR029044) - T[117-393] 2.44E-53 |
| Gene3D |
Nucleotide-diphossugar_trans (IPR029044) - T[125-381] 6.2E-125 |
| Pfam |
Glyco_trans_2-like (IPR001173) - T[141-325] 1.3E-33 |
| ProSiteProfiles |
Ricin_B_lectin (IPR000772) - T[385-511] 24.646 |
| SUPERFAMILY |
Ricin_B-like_lectins (IPR035992) - T[387-511] 1.73E-35 |
| SMART |
Ricin_B_lectin (IPR000772) - T[388-511] 9.7E-30 |
| Pfam |
Ricin_B_lectin (IPR000772) - T[393-508] 3.4E-28 |
| CDD |
Ricin_B_lectin (IPR000772) - T[399-510] 2.1706E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GALT3_HUMAN | 41.791 % | 332 | 6.76E-107 |
| GALT1_HUMAN | 56.14 % | 595 | 0 |
| GLT13_HUMAN | 55.342 % | 590 | 0 |
