- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S308.g12937.02.t
Possible name(s)
P4HA1; P4HA2; P4HA3
Gene model
Location
S308 [90,623 / 94,754]
Amino acid sequence
Length: 541
>Harore.CG.MTP2014.S308.g12937.02.p
ILLDFLTLIMLKLVVFALLVQSSFCEWYSSIGHMEDLVYEEMGLLTTLDGYIEAEEKKLD
KIKNFASTMKNNAEEMKNNLEKYLGHPVNQYLLVKRLKSTWDEMEGMVSKNASDKFLTNL
MDKRSQLPNDEDVEGTAKAIMRLQDTYNLDTHDLAEGIIRDTRASGSLSADDCFNIGRTA
YLDKDFYHCALWMREANDKLLNGDTTSDRFDVLDHLAYCFSQQGNLKIAYELTEKMLELQ
PNHDRIMSNRKYYRELLGAKKKGDDGNVITDTFAATLKRPVDYPLIPERALYEKLCREGG
EKVPDSVQRKLKCYYWNNKQNPWLLLQPYKMEELWDKPHLVRFYDIVSDNEINKIKAMAK
PRLARATVQNPVTGILEHAHYRVSKSAWLNDRESELIRKISQRISEVTGLSMKTAEELQI
ANYGVGGQYEPHYDFARLRETGSFERQVGNRIATMLFYLTDVGHGGSTVFLVPKIAVRPI
KGSAVFWYNLYPSGVGDMRTRHAACPVLTGVKWVANKWIHERSQEFRRSCGVQKKSENRI
F
Nucleotide sequence
Length: 3,328
>Harore.CG.MTP2014.S308.g12937.02.t
AGATCTTGTTAGATTTTCTGACTTTAATTATGTTAAAACTGGTTGTGTTTGCACTGTTGG
TGCAGTCCTCTTTCTGCGAATGGTATTCTTCGATCGGACACATGGAAGATCTCGTTTACG
AAGAGATGGGCTTACTCACGACACTCGATGGATACATCGAAGCGGAGGAAAAGAAACTCG
ATAAAATAAAAAATTTTGCTTCGACTATGAAAAATAACGCGGAAGAAATGAAAAATAACC
TGGAGAAATATCTCGGACATCCAGTTAATCAGTATCTTTTAGTGAAACGACTGAAATCTA
CATGGGATGAGATGGAAGGAATGGTTTCAAAGAATGCTTCTGACAAATTTCTCACAAACC
TGATGGATAAAAGATCTCAACTTCCAAATGATGAAGATGTTGAGGGAACAGCAAAAGCAA
TCATGAGATTACAGGACACATACAACCTTGACACTCATGATCTCGCTGAAGGAATCATTA
GAGATACACGAGCCAGTGGTTCACTTTCCGCAGATGATTGTTTCAACATTGGACGAACCG
CTTATCTCGACAAAGATTTTTATCATTGTGCTCTGTGGATGAGAGAGGCAAATGATAAGT
TATTGAACGGAGACACAACATCTGATAGATTTGATGTGCTCGACCATCTTGCATACTGTT
TCTCCCAGCAAGGAAATTTGAAGATCGCGTACGAACTTACCGAGAAGATGTTGGAACTGC
AACCAAATCACGATAGAATCATGAGCAATCGAAAATATTATCGGGAACTTCTCGGAGCCA
AGAAGAAAGGCGACGACGGAAACGTGATCACCGATACGTTTGCAGCGACCTTGAAACGAC
CTGTCGATTACCCACTCATCCCTGAACGTGCGCTGTACGAGAAATTGTGCAGGGAAGGTG
GGGAAAAAGTGCCGGACAGTGTCCAACGCAAATTGAAGTGCTATTACTGGAACAACAAAC
AGAACCCATGGCTTTTACTTCAGCCGTACAAAATGGAAGAGCTCTGGGACAAACCTCACC
TTGTTAGATTTTACGATATCGTATCTGACAACGAGATAAACAAAATAAAAGCGATGGCGA
AACCCAGACTTGCCCGAGCGACGGTCCAGAACCCTGTGACGGGAATCCTCGAACACGCCC
ACTACCGGGTGAGCAAGAGCGCTTGGTTGAACGACCGCGAGAGCGAGCTCATACGAAAAA
TAAGTCAAAGGATATCAGAAGTCACCGGACTGTCGATGAAAACGGCCGAAGAGCTGCAGA
TAGCAAATTACGGGGTCGGAGGTCAATACGAACCTCATTACGACTTTGCGAGACTAAGAG
AAACAGGTTCATTCGAGCGTCAAGTGGGTAATCGCATCGCGACGATGCTGTTTTACTTAA
CGGACGTTGGACATGGCGGGTCGACTGTTTTCTTGGTCCCCAAAATAGCAGTACGTCCGA
TCAAGGGAAGCGCCGTGTTCTGGTACAATTTATATCCCTCTGGTGTAGGAGACATGCGTA
CCCGACATGCAGCTTGCCCGGTGCTTACCGGAGTCAAGTGGGTCGCGAATAAGTGGATTC
ACGAGCGCAGCCAGGAGTTCAGGAGATCGTGCGGAGTCCAAAAGAAATCCGAAAATCGAA
TCTTTTGAGGGGGATAGGGGAATTCGATGAATTAGCGCCAAAAACCACGTTGCCAAGAAT
AGTTTTCTGCTTGAAGTTGAACATGTTTTATTGCTGAAAAGTTTTTTTTTGCAAATATTT
TGTTTCTGCTATTTTTTCTAGATAGCAGAACGGTTTCAATCCAAGTTTTAAAGAACTGAA
GTAATGCAAAATAGACAAACCTAACTCTTTCTCTAAACCTAACGGTTGTCCTAACCCAAT
TCATAGCTATTCATTGTATGTCCGTATGTACTTGTGCAACGTAAGGAGAACATTTTAACC
GGTAGTTTGCCAACAACCCAGAAGAATATGAAAATATGGATCTGTAGTCGGAAACAGCAC
AAGATAAAACTTTTCCAAGTTTATACTTATTCTAGTCATTTTTACAAGGTAGGCAAACTA
CTATGCCAAAATCTCAATGTACGCCAGCTTACCCTGCTCCCCTGCTTTCTATACCTGCTT
GTGCAGGAGTCTTCATCAAATTTTGCAGTTTTCGAATCTATAATGAAATATAAAATACGA
TCAATTTGTTGGAAAATGATCCGTTGCTTTTTATGCTTACAATGCTGCACGTATTACCTT
TCCTTTGATTGCTTTCTAATAATAGTAATAGCAGTACAAACGCCTGTGTTACCTTCCAAG
CTTCAGCATAATAGTACATTTAGCTTCAGAATCCACTATGCTGTCTCTTCCTCTGCAAGA
CCAAGTGTATTTTGTAATGAATTTTAATGAAACTCTTTTTTTTACTATTTTGGATTTCTA
ATTTCCGCAGTTTCGCTCTGTTATATGTCATTTTTTCACTTAGCTGTCGATTCTGAGTTT
CTGTTTTTAGTTTAATTGCACAATTTGGCAATAATTAGCTTTTCATTTACTACACCACAG
TATTATTACTATTTTACGCAGTTCAAAATTGCATTTGCCTAGTACAGGTACACCCACTAA
CATGCAAGCGCATTGCTTATAGTGTATCTTTTGTACTTTGGATAAAAATCCTTGTATTTT
ATTTCACATTACTGTAATTTTAACACAAATTATTTTCCACCAATCCAATTTTTTTATTTG
TTAAATTAATAGCTACCACGTGGTCTAAAATTAAATGTAACTACTAGTAATATAGAACTG
TCAATGAAGAGATTTGATGATATGATTGACAGTAGACTTATGTAAAATACGGGTCCAATG
TAATTAATAGGCACCTTTTGTTTTAAAATAAATTAAACTTCAGAACATTTATAACACGTG
TGTGCATTGCTTACAGTTATCTATAGTGCTATAGACAAATGTCCATTTATTTCATTCATT
TTTATTTCATATATTATTCATAATTTTCTACCACTCTCAATTTTTATTTGTTAAATTAAT
AAGCATCACATGATCTAAAATATAATTAGGACTTTGTAAGGTGTGAAAAAGGATGTTTAA
TGATGATAGTCATGTAAAAACTAATTAGGATTGTAAAATAAGGTTTTTATCCAGATTTTG
AAAAAACTTTTTAAACCTTTAACCTGCTGTATGAATTCTGTTCTGTGTTGGTTTTCTTAG
TTATTGGGAAACCAATGTGTTCATGTAATGTTTTTGTATCATTGAATTATATCAATTCTG
CTGTATAACTAACCAGTGCAACTATCGTAATTTTCTGAATATAATGCATACCCCAACTAT
GACATCCAGATAGCTGAAAAAGCTCTAT
| Pfam |
Pro_4_hyd_alph_N (IPR013547) - T[30-160] 2.4E-40 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[130-258] 2.4E-41 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[168-258] 3.29E-9 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[210-243] 8.762 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[210-243] 9.193 |
| SMART |
Pro_4_hyd_alph (IPR006620) - T[338-520] 3.1E-62 |
| ProSiteProfiles |
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[414-521] 12.571 |
| Pfam |
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[418-520] 3.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P4HA1_HUMAN | 48.776 % | 496 | 1.06E-171 |
| P4HA2_HUMAN | 47.556 % | 496 | 5.29E-172 |
| P4HA3_HUMAN | 37.393 % | 302 | 4.33E-96 |