- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C3.124.v4....' >
- Transcript 'Boleac.CG.SB_v3.S4.g...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S2.g10204.01.t
Possible name(s)
RAP1GAP; RAP1GAP2; SIPA1
Gene model
Location
S2 [733,454 / 760,504]
Amino acid sequence
Length: 912
>Harore.CG.MTP2014.S2.g10204.01.p
MPEIKWLETLRSPHVGRHKKFKLQERCDAPLTLKTSRRDAEGGVTCEPCAQTIDMSDGKT
QSYDSFKNDDLFAMLEKVQGTRMDEQRCSLHLPASHLSVEKQVETPQYPSIQEVLRKGSP
YPQVIPPPYGGYWVQGFHPESAFLSTDLSKEPLTPYTKKLSIEREEIITSYRKHFLGKEH
VNLYAFDENLGQLVMSVKHEKSAMNETGFIRVLLRCRDRSWAHRFNAVDGGTPAQWAKII
CDDITVDRFFPVVSTNAWNSILNFDEHSVNAVNKFGILYQKANQAKEEEVFGNRDESPAF
REFLEYIGDVVELKGFKGFRGGLDVQHGHTGDTSVYGRYQDKEVMFHVSTMLPYIEGDRQ
QLQRKRHIGNDIVAIVFQDGETPFVPNMITSHFLHAYIVIQAIDPCTPNCRYKVSVTCRE
DVPEFEPSLPEPAIFAKNDAFREWLYCKMMNAEWACYKSEQFAKLQFRTRSMLMEQLYDE
IHGATEAMLGMTTTGSTDNLSNASSDTVKEGSNGFFDAFKRLTRNRASSIEQSPLMINRK
LNSSSDSKQHGTSSSFNDHKSPGKTNSNIERSSTFDENDRQRQKGESSSLQHSNDSGNVS
DLTLDCKSIQGSNPSLSESPKKSRRNRTHSPCPSCGSYNSLDSDTGVESMASSSRTDSWP
RSGRVSVNENAATDQNQNRKLHHKSSAGDGKELESLRNEVFKLKKEKQEWSQLQQDYVNL
QRELKRLRDKEGVGDLNNITKKLDQMGVNDAIATTAEHLLCSNMENHLKLLPCNARQRIL
VSKYVFVSRCFDKTCCSLVLYQSTSNERPTRIKRNSFGHRPKKPKTVRKLIESILRWNSL
KNFWNFYNFGCNVKLFIIFCYINSLLSSFYLVYDYCFFAHCVVFSFLSHCFRPFSRPASC
PRSDADPVYSVC
Nucleotide sequence
Length: 3,355
>Harore.CG.MTP2014.S2.g10204.01.t
AAGGAACATTCGCGTATTAAGCATAAATCTACATAGGCTTAGCATTGCGTAAGAAGTCGA
CTCGAATTAGTCTATAGTTTTTCATCGTCTGCTGATTTGACAACGGAAGTCCTGAGTTGT
AGTTTCTGTACTACAGTTGCTAGGACACAGACACGATTCCTAACACAAGGTTTATACGTA
AAATGCCAGAAATCAAATGGCTTGAAACGTTACGTTCGCCACACGTGGGAAGGCACAAGA
AATTTAAACTCCAGGAAAGGTGTGACGCTCCTTTGACACTGAAGACCAGTCGAAGGGATG
CTGAAGGTGGTGTAACCTGCGAACCTTGCGCACAAACCATCGACATGTCTGACGGAAAAA
CACAATCGTACGATAGCTTCAAGAATGATGACCTCTTTGCTATGCTAGAAAAAGTTCAGG
GTACAAGAATGGATGAACAAAGATGTTCTCTTCACTTACCCGCATCTCATTTGTCTGTGG
AAAAACAGGTCGAAACCCCACAATACCCCTCGATTCAAGAAGTTCTTCGTAAGGGCTCAC
CATATCCTCAAGTTATTCCTCCGCCATATGGCGGCTATTGGGTCCAGGGGTTCCATCCTG
AATCCGCGTTCCTCAGCACAGACCTGTCAAAGGAGCCTTTAACGCCGTACACCAAAAAGT
TGAGCATAGAACGAGAAGAAATTATAACCTCATACAGAAAACATTTTCTTGGCAAAGAAC
ACGTCAATTTGTACGCGTTTGATGAAAATCTCGGTCAGTTGGTCATGTCAGTAAAACACG
AAAAATCTGCAATGAACGAAACCGGATTCATAAGAGTTCTACTGAGATGCCGAGATCGTT
CTTGGGCACATAGATTCAATGCTGTGGATGGAGGGACGCCTGCACAATGGGCCAAAATCA
TCTGCGATGATATCACGGTCGACAGGTTCTTTCCGGTTGTTTCCACAAACGCCTGGAATT
CTATTCTTAACTTTGATGAACATTCCGTTAATGCCGTCAATAAGTTCGGCATCCTTTACC
AGAAAGCGAATCAGGCAAAAGAAGAAGAGGTTTTTGGTAATCGGGATGAGAGTCCTGCCT
TCAGAGAATTCCTCGAGTATATCGGCGACGTAGTTGAATTAAAGGGATTCAAAGGCTTCC
GTGGCGGTCTAGACGTTCAACATGGACATACGGGAGATACATCTGTGTACGGCCGATATC
AAGACAAGGAAGTCATGTTTCACGTCTCGACGATGTTGCCGTATATCGAGGGGGACAGAC
AACAACTCCAGCGAAAACGACACATTGGAAATGACATTGTTGCTATCGTGTTCCAAGATG
GCGAAACTCCGTTTGTTCCTAACATGATTACGTCTCACTTCCTTCACGCTTACATCGTCA
TACAGGCAATAGATCCATGTACTCCGAATTGTCGTTATAAGGTTTCCGTTACTTGTCGTG
AGGATGTTCCAGAATTTGAACCGTCGCTGCCCGAGCCCGCCATTTTCGCCAAAAACGACG
CTTTCCGAGAATGGCTTTATTGCAAAATGATGAATGCCGAGTGGGCTTGTTACAAGTCTG
AACAATTTGCTAAACTTCAGTTCCGAACCAGATCAATGCTAATGGAACAATTGTATGATG
AAATTCACGGAGCAACCGAAGCTATGCTAGGAATGACGACCACGGGATCTACCGATAATC
TTAGTAATGCTTCCTCAGATACTGTAAAGGAAGGGAGTAATGGATTTTTTGACGCTTTCA
AGAGGCTTACGCGAAACAGAGCGTCATCTATCGAACAAAGTCCGTTAATGATAAACAGAA
AATTAAATTCTTCATCGGATTCGAAGCAACACGGAACGTCCTCTTCATTCAACGACCATA
AATCACCGGGGAAAACAAATAGTAACATTGAAAGAAGTTCAACGTTCGATGAAAATGATC
GACAACGACAGAAAGGTGAATCATCCTCTCTGCAACACAGTAACGACAGTGGGAATGTAT
CAGATCTGACTTTGGATTGCAAATCGATTCAAGGAAGCAATCCATCATTAAGCGAATCTC
CAAAAAAATCGAGACGTAATCGAACTCATTCACCTTGTCCTTCATGTGGAAGCTACAACA
GCTTGGATTCAGATACTGGCGTGGAAAGTATGGCGTCTTCATCGAGAACAGATTCGTGGC
CCAGAAGTGGCAGAGTATCTGTCAACGAAAATGCTGCTACAGACCAAAACCAGAATAGAA
AGTTACATCATAAATCTAGCGCAGGTGACGGAAAAGAGCTCGAAAGTTTAAGAAACGAGG
TTTTCAAGTTAAAAAAAGAGAAGCAAGAATGGTCGCAGTTACAGCAAGACTATGTGAACC
TCCAACGAGAACTGAAGCGTCTACGTGATAAAGAGGGCGTCGGAGACCTCAACAACATTA
CTAAAAAACTAGATCAAATGGGTGTCAATGATGCCATTGCAACTACGGCGGAACATTTAC
TGTGTTCAAATATGGAGAATCATTTGAAGCTTCTTCCTTGCAACGCACGGCAACGAATAT
TGGTTTCAAAATACGTGTTTGTCAGTCGGTGTTTTGACAAAACCTGTTGCAGTTTAGTTC
TGTACCAATCAACTTCAAACGAGAGACCAACTCGCATTAAACGGAATTCTTTTGGTCATC
GTCCCAAGAAACCGAAAACCGTACGAAAACTTATTGAGTCGATCTTACGTTGGAATTCAC
TCAAAAATTTCTGGAATTTTTATAATTTCGGCTGCAACGTCAAATTATTTATCATTTTCT
GCTATATAAATAGTTTGCTGTCGTCTTTTTATTTAGTTTATGACTATTGTTTTTTTGCAC
ATTGTGTGGTCTTTTCATTTCTGAGCCACTGTTTCAGACCCTTTTCACGCCCAGCTAGCT
GTCCTAGGTCGGATGCCGACCCTGTATATTCCGTCTGTTAAGCGTTTATTGCGCGAAAGC
ACAATGCTTGAGTTAATGAACGGTAATATTTGGAAAAAACGAAAGTTCCTAAATTCTTTT
ATCCTTATTTATATAGCAACCCATCACGATTATTTTCCTGTTAACTCCGAACGACAAGTG
TAGTGGGTTTATCGTCTACAGTATTATCCTAAGATTTGCATAGCTGTAGATATCCATAAG
GCTAGAAATGCAAATTGCCGACCTCAACGCTTATTTCTTCGCTATTTGATTTGTGTATAT
AAAAATATGTCAATGTTTTTCCCCGAATCTTATTGCTTCCTTCTCAAGGTTTAAGATTTC
ACTTTGATATTTGAAACTATTAAATCATGACGTGGAAAATACGCTGTACTGGCAAATTCA
ATATCGCTGGAAGTTTCTAAAAACGAGGATGAATATTCTCTATAATAGAACGGAG
| SMART |
GoLoco_motif (IPR003109) - T[68-90] 5.3E-8 |
| ProSiteProfiles |
GoLoco_motif (IPR003109) - T[68-90] 10.583 |
| Pfam |
GoLoco_motif (IPR003109) - T[69-90] 2.1E-9 |
| SUPERFAMILY |
Rap/Ran-GAP_sf (IPR035974) - T[168-488] 1.7E-102 |
| ProSiteProfiles |
Rap_GAP_dom (IPR000331) - T[261-477] 69.39 |
| Gene3D |
Rap/Ran-GAP_sf (IPR035974) - T[270-458] 4.3E-77 |
| Pfam |
Rap_GAP_dom (IPR000331) - T[290-470] 1.4E-62 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RPGP1_HUMAN | 44.214 % | 438 | 1.74E-142 |
| RPGP2_HUMAN | 47.908 % | 436 | 8.31E-141 |
| SIPA1_HUMAN | 39.583 % | 244 | 1.15E-67 |