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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S95....'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'
  3. Transcript 'KH2012:KH.C3.124.v4....'
  4. Transcript 'Boleac.CG.SB_v3.S4.g...'
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2.g10204.01.t

Possible name(s)

RAP1GAP; RAP1GAP2; SIPA1

Location

S2 [733,454 / 760,504]

Sequences

Amino acid sequence

Length: 912

>Harore.CG.MTP2014.S2.g10204.01.p
MPEIKWLETLRSPHVGRHKKFKLQERCDAPLTLKTSRRDAEGGVTCEPCAQTIDMSDGKT
QSYDSFKNDDLFAMLEKVQGTRMDEQRCSLHLPASHLSVEKQVETPQYPSIQEVLRKGSP
YPQVIPPPYGGYWVQGFHPESAFLSTDLSKEPLTPYTKKLSIEREEIITSYRKHFLGKEH
VNLYAFDENLGQLVMSVKHEKSAMNETGFIRVLLRCRDRSWAHRFNAVDGGTPAQWAKII
CDDITVDRFFPVVSTNAWNSILNFDEHSVNAVNKFGILYQKANQAKEEEVFGNRDESPAF
REFLEYIGDVVELKGFKGFRGGLDVQHGHTGDTSVYGRYQDKEVMFHVSTMLPYIEGDRQ
QLQRKRHIGNDIVAIVFQDGETPFVPNMITSHFLHAYIVIQAIDPCTPNCRYKVSVTCRE
DVPEFEPSLPEPAIFAKNDAFREWLYCKMMNAEWACYKSEQFAKLQFRTRSMLMEQLYDE
IHGATEAMLGMTTTGSTDNLSNASSDTVKEGSNGFFDAFKRLTRNRASSIEQSPLMINRK
LNSSSDSKQHGTSSSFNDHKSPGKTNSNIERSSTFDENDRQRQKGESSSLQHSNDSGNVS
DLTLDCKSIQGSNPSLSESPKKSRRNRTHSPCPSCGSYNSLDSDTGVESMASSSRTDSWP
RSGRVSVNENAATDQNQNRKLHHKSSAGDGKELESLRNEVFKLKKEKQEWSQLQQDYVNL
QRELKRLRDKEGVGDLNNITKKLDQMGVNDAIATTAEHLLCSNMENHLKLLPCNARQRIL
VSKYVFVSRCFDKTCCSLVLYQSTSNERPTRIKRNSFGHRPKKPKTVRKLIESILRWNSL
KNFWNFYNFGCNVKLFIIFCYINSLLSSFYLVYDYCFFAHCVVFSFLSHCFRPFSRPASC
PRSDADPVYSVC

Nucleotide sequence

Length: 3,355

>Harore.CG.MTP2014.S2.g10204.01.t
AAGGAACATTCGCGTATTAAGCATAAATCTACATAGGCTTAGCATTGCGTAAGAAGTCGA
CTCGAATTAGTCTATAGTTTTTCATCGTCTGCTGATTTGACAACGGAAGTCCTGAGTTGT
AGTTTCTGTACTACAGTTGCTAGGACACAGACACGATTCCTAACACAAGGTTTATACGTA
AAATGCCAGAAATCAAATGGCTTGAAACGTTACGTTCGCCACACGTGGGAAGGCACAAGA
AATTTAAACTCCAGGAAAGGTGTGACGCTCCTTTGACACTGAAGACCAGTCGAAGGGATG
CTGAAGGTGGTGTAACCTGCGAACCTTGCGCACAAACCATCGACATGTCTGACGGAAAAA
CACAATCGTACGATAGCTTCAAGAATGATGACCTCTTTGCTATGCTAGAAAAAGTTCAGG
GTACAAGAATGGATGAACAAAGATGTTCTCTTCACTTACCCGCATCTCATTTGTCTGTGG
AAAAACAGGTCGAAACCCCACAATACCCCTCGATTCAAGAAGTTCTTCGTAAGGGCTCAC
CATATCCTCAAGTTATTCCTCCGCCATATGGCGGCTATTGGGTCCAGGGGTTCCATCCTG
AATCCGCGTTCCTCAGCACAGACCTGTCAAAGGAGCCTTTAACGCCGTACACCAAAAAGT
TGAGCATAGAACGAGAAGAAATTATAACCTCATACAGAAAACATTTTCTTGGCAAAGAAC
ACGTCAATTTGTACGCGTTTGATGAAAATCTCGGTCAGTTGGTCATGTCAGTAAAACACG
AAAAATCTGCAATGAACGAAACCGGATTCATAAGAGTTCTACTGAGATGCCGAGATCGTT
CTTGGGCACATAGATTCAATGCTGTGGATGGAGGGACGCCTGCACAATGGGCCAAAATCA
TCTGCGATGATATCACGGTCGACAGGTTCTTTCCGGTTGTTTCCACAAACGCCTGGAATT
CTATTCTTAACTTTGATGAACATTCCGTTAATGCCGTCAATAAGTTCGGCATCCTTTACC
AGAAAGCGAATCAGGCAAAAGAAGAAGAGGTTTTTGGTAATCGGGATGAGAGTCCTGCCT
TCAGAGAATTCCTCGAGTATATCGGCGACGTAGTTGAATTAAAGGGATTCAAAGGCTTCC
GTGGCGGTCTAGACGTTCAACATGGACATACGGGAGATACATCTGTGTACGGCCGATATC
AAGACAAGGAAGTCATGTTTCACGTCTCGACGATGTTGCCGTATATCGAGGGGGACAGAC
AACAACTCCAGCGAAAACGACACATTGGAAATGACATTGTTGCTATCGTGTTCCAAGATG
GCGAAACTCCGTTTGTTCCTAACATGATTACGTCTCACTTCCTTCACGCTTACATCGTCA
TACAGGCAATAGATCCATGTACTCCGAATTGTCGTTATAAGGTTTCCGTTACTTGTCGTG
AGGATGTTCCAGAATTTGAACCGTCGCTGCCCGAGCCCGCCATTTTCGCCAAAAACGACG
CTTTCCGAGAATGGCTTTATTGCAAAATGATGAATGCCGAGTGGGCTTGTTACAAGTCTG
AACAATTTGCTAAACTTCAGTTCCGAACCAGATCAATGCTAATGGAACAATTGTATGATG
AAATTCACGGAGCAACCGAAGCTATGCTAGGAATGACGACCACGGGATCTACCGATAATC
TTAGTAATGCTTCCTCAGATACTGTAAAGGAAGGGAGTAATGGATTTTTTGACGCTTTCA
AGAGGCTTACGCGAAACAGAGCGTCATCTATCGAACAAAGTCCGTTAATGATAAACAGAA
AATTAAATTCTTCATCGGATTCGAAGCAACACGGAACGTCCTCTTCATTCAACGACCATA
AATCACCGGGGAAAACAAATAGTAACATTGAAAGAAGTTCAACGTTCGATGAAAATGATC
GACAACGACAGAAAGGTGAATCATCCTCTCTGCAACACAGTAACGACAGTGGGAATGTAT
CAGATCTGACTTTGGATTGCAAATCGATTCAAGGAAGCAATCCATCATTAAGCGAATCTC
CAAAAAAATCGAGACGTAATCGAACTCATTCACCTTGTCCTTCATGTGGAAGCTACAACA
GCTTGGATTCAGATACTGGCGTGGAAAGTATGGCGTCTTCATCGAGAACAGATTCGTGGC
CCAGAAGTGGCAGAGTATCTGTCAACGAAAATGCTGCTACAGACCAAAACCAGAATAGAA
AGTTACATCATAAATCTAGCGCAGGTGACGGAAAAGAGCTCGAAAGTTTAAGAAACGAGG
TTTTCAAGTTAAAAAAAGAGAAGCAAGAATGGTCGCAGTTACAGCAAGACTATGTGAACC
TCCAACGAGAACTGAAGCGTCTACGTGATAAAGAGGGCGTCGGAGACCTCAACAACATTA
CTAAAAAACTAGATCAAATGGGTGTCAATGATGCCATTGCAACTACGGCGGAACATTTAC
TGTGTTCAAATATGGAGAATCATTTGAAGCTTCTTCCTTGCAACGCACGGCAACGAATAT
TGGTTTCAAAATACGTGTTTGTCAGTCGGTGTTTTGACAAAACCTGTTGCAGTTTAGTTC
TGTACCAATCAACTTCAAACGAGAGACCAACTCGCATTAAACGGAATTCTTTTGGTCATC
GTCCCAAGAAACCGAAAACCGTACGAAAACTTATTGAGTCGATCTTACGTTGGAATTCAC
TCAAAAATTTCTGGAATTTTTATAATTTCGGCTGCAACGTCAAATTATTTATCATTTTCT
GCTATATAAATAGTTTGCTGTCGTCTTTTTATTTAGTTTATGACTATTGTTTTTTTGCAC
ATTGTGTGGTCTTTTCATTTCTGAGCCACTGTTTCAGACCCTTTTCACGCCCAGCTAGCT
GTCCTAGGTCGGATGCCGACCCTGTATATTCCGTCTGTTAAGCGTTTATTGCGCGAAAGC
ACAATGCTTGAGTTAATGAACGGTAATATTTGGAAAAAACGAAAGTTCCTAAATTCTTTT
ATCCTTATTTATATAGCAACCCATCACGATTATTTTCCTGTTAACTCCGAACGACAAGTG
TAGTGGGTTTATCGTCTACAGTATTATCCTAAGATTTGCATAGCTGTAGATATCCATAAG
GCTAGAAATGCAAATTGCCGACCTCAACGCTTATTTCTTCGCTATTTGATTTGTGTATAT
AAAAATATGTCAATGTTTTTCCCCGAATCTTATTGCTTCCTTCTCAAGGTTTAAGATTTC
ACTTTGATATTTGAAACTATTAAATCATGACGTGGAAAATACGCTGTACTGGCAAATTCA
ATATCGCTGGAAGTTTCTAAAAACGAGGATGAATATTCTCTATAATAGAACGGAG

InterProScan

SMART
GoLoco_motif (IPR003109) - T[68-90] 5.3E-8
ProSiteProfiles
GoLoco_motif (IPR003109) - T[68-90] 10.583
Pfam
GoLoco_motif (IPR003109) - T[69-90] 2.1E-9
SUPERFAMILY
Rap/Ran-GAP_sf (IPR035974) - T[168-488] 1.7E-102
ProSiteProfiles
Rap_GAP_dom (IPR000331) - T[261-477] 69.39
Gene3D
Rap/Ran-GAP_sf (IPR035974) - T[270-458] 4.3E-77
Pfam
Rap_GAP_dom (IPR000331) - T[290-470] 1.4E-62

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPGP1_HUMAN 44.214 % 438 1.74E-142
RPGP2_HUMAN 47.908 % 436 8.31E-141
SIPA1_HUMAN 39.583 % 244 1.15E-67