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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2.g05572.01.t

Possible name(s)

FABP1; FABP6; KDM8

Gene model

Harore.CG.MTP2014.S2.g05572

Location

S2 [190,154 / 195,022]

Sequences

Amino acid sequence

Length: 481

>Harore.CG.MTP2014.S2.g05572.01.p
MLSLKIFCMWNAFVLIKAEVLFPKDISIDFVFPPKHRRSATGLPDGHLRPLGWQRNPEGK
IHEYSEVVDPKTFWETHVKPKKPLVLREGFNQSSEIFTTWDDAHLKSEYGDIMVDVTTKR
PGSIIEPEVMKLKRFLKRYTLEDWYLVMPVPDEMMHAIPAVPSLLCGSFKKFLQEVEIWM
SAGGTSTKLHYDPDHNMHCLVGGRKDFILYDPKHKHQFDFEDDVHAGSGVSKVDPEMVNM
FQYPKISKIPWTWTTLKPGDCIFIPAGHLHQVRSYGRSLSFSTLWTPLKEFNDTDCVDAD
IKKFTTMDELSFVWKLEDGQRIVDPTNFTTDPEIFRHHLLSILRDGDKLRRERIMSFAGT
YILESRDNYDAFAAASGATPEQIERGTKLEKVKTEITNNGDTYTVTRHFPNQKVTNTFTL
GVPTEASFAEGKKAKVVVTMEGGKLVMKGDNFSQVTELVGGKLKDTLNFKGTEMIRHSIK
A

Nucleotide sequence

Length: 1,506

>Harore.CG.MTP2014.S2.g05572.01.t
CTCAGACTAGACGTATACTTTAGAAGCGAGATATAAAACACACAAGAATAGTTAATAGCT
ATGCTTTCCCTGAAGATTTTCTGTATGTGGAACGCATTCGTATTGATAAAGGCTGAAGTT
CTCTTCCCCAAAGATATATCAATCGATTTCGTTTTTCCTCCTAAGCACCGGAGATCGGCT
ACCGGGTTACCGGACGGACATCTCCGTCCTCTAGGATGGCAAAGAAACCCAGAAGGGAAG
ATCCATGAGTATTCGGAAGTGGTAGATCCAAAAACATTTTGGGAAACACATGTCAAACCA
AAGAAACCACTAGTTCTAAGGGAAGGTTTCAATCAATCTTCAGAGATTTTCACAACTTGG
GACGACGCTCATCTCAAGTCGGAATATGGAGACATTATGGTCGATGTTACGACAAAACGA
CCAGGAAGTATAATAGAGCCAGAAGTTATGAAACTCAAAAGATTTCTAAAACGATACACG
TTGGAAGACTGGTATTTGGTCATGCCAGTACCAGATGAAATGATGCATGCTATACCTGCA
GTTCCTTCATTGTTATGCGGTTCGTTCAAAAAATTTCTTCAAGAAGTAGAAATTTGGATG
AGTGCTGGCGGGACATCCACAAAACTTCACTACGACCCCGACCATAATATGCATTGCCTC
GTCGGAGGGCGAAAAGACTTCATATTGTACGACCCTAAACACAAACATCAATTCGATTTC
GAGGACGATGTACACGCAGGCAGCGGAGTCTCGAAAGTAGACCCTGAGATGGTAAACATG
TTTCAGTATCCGAAAATATCGAAAATTCCTTGGACTTGGACCACATTGAAACCTGGGGAT
TGCATTTTTATACCAGCAGGTCATTTACATCAAGTTCGTTCTTACGGTCGAAGTCTCTCG
TTCAGCACCTTGTGGACGCCGCTGAAGGAATTCAACGACACTGACTGCGTTGATGCCGAC
ATCAAGAAATTTACAACGATGGATGAATTATCCTTTGTGTGGAAGTTGGAAGATGGACAA
CGAATAGTGGATCCAACAAACTTCACTACTGATCCCGAAATATTTAGGCATCATCTTTTG
TCAATTCTGAGAGACGGGGACAAACTCAGAAGAGAGAGAATCATGTCTTTCGCTGGAACT
TACATCTTAGAGAGCAGAGATAACTACGATGCCTTTGCTGCTGCATCCGGGGCGACTCCT
GAACAGATCGAAAGAGGAACCAAGCTTGAAAAGGTGAAAACGGAAATCACGAACAATGGT
GACACGTACACCGTCACAAGACATTTCCCTAACCAAAAAGTAACCAATACTTTCACCCTT
GGAGTTCCCACGGAGGCATCGTTTGCTGAAGGAAAAAAGGCAAAGGTTGTTGTCACCATG
GAAGGTGGAAAGTTGGTCATGAAAGGAGACAACTTCTCCCAAGTTACCGAATTGGTCGGA
GGGAAACTGAAAGATACATTGAACTTCAAAGGAACAGAAATGATCAGACATTCGATAAAA
GCTTAA

InterProScan

SMART
JmjC_dom (IPR003347) - T[138-301] 1.2E-4
ProSiteProfiles
JmjC_dom (IPR003347) - T[150-302] 20.202
Gene3D
Calycin (IPR012674) - T[352-481] 1.0E-33
SUPERFAMILY
Calycin (IPR012674) - T[355-480] 3.31E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value