- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S299.g13910.01.t
Possible name(s)
BARHL1; BARHL2; GBX2
Gene model
Location
S299 [52,994 / 54,500]
Amino acid sequence
Length: 416
>Harore.CG.MTP2014.S299.g13910.01.p
MNSSEIESNDTEIISSSSEKSPTVTSPSMNSFDMTLGNESRNEKYKGLSNSPTSMEIKKR
PRTAFTPEQIKRLESEFQRNKYLSVGKRMELSKALKLTETQIKIWFQNRRTKWKREYLSE
WEVWAHQNYYAMHGLYGAAAAASALAAVSNVAVAAAGTPGIQRSPPMHPAMMSAHGVNGF
TGSPFPDPLNSSLKGVPGAFNHSPLIFPNPMMSHSPHSRLPPQMQLSSPPPPAKPSPIMA
SRLAAGGQPMPPLHPSSQPMLPQLPYYFFPGQMYAAAVAANQQPPVMPGDPSGAFVDRWT
STSSTSSSPTSHETNFGTPILNSPVTFNSTKLSPQVLHNRSSSDASSNFKTSVNAVLCGA
KPSRLMLPNLSNGHSSMYLGRWAGVRGIKSPTVPTDQNNNHSTPYAHDNDIISTPT
Nucleotide sequence
Length: 1,251
>Harore.CG.MTP2014.S299.g13910.01.t
ATGAATTCTAGCGAAATCGAATCCAACGACACGGAAATTATTTCTTCTTCGTCTGAAAAA
TCGCCTACGGTGACGTCACCATCCATGAATTCATTCGATATGACGTTGGGTAACGAAAGT
CGCAACGAGAAGTATAAAGGTTTGTCAAATTCTCCAACATCCATGGAGATCAAAAAGCGC
CCTCGCACGGCGTTTACCCCAGAACAGATCAAAAGATTGGAATCTGAATTTCAACGCAAC
AAGTATCTGTCCGTTGGCAAGCGAATGGAATTGTCCAAGGCTCTGAAACTTACGGAAACT
CAGATCAAAATATGGTTTCAAAATCGACGAACAAAATGGAAACGGGAATACTTGAGTGAG
TGGGAGGTTTGGGCACACCAGAACTACTATGCAATGCATGGCCTATACGGGGCAGCTGCG
GCGGCGTCTGCGTTAGCCGCGGTGTCGAACGTCGCCGTTGCCGCTGCTGGCACTCCAGGA
ATACAAAGATCTCCACCGATGCACCCTGCTATGATGAGTGCACACGGGGTAAACGGGTTT
ACAGGATCCCCTTTTCCTGATCCCCTAAACAGCTCACTTAAAGGGGTTCCAGGAGCGTTC
AACCATTCGCCACTTATATTTCCTAACCCAATGATGTCCCATTCACCCCATTCGCGTCTC
CCACCGCAAATGCAACTGTCTTCACCACCACCGCCTGCCAAACCAAGTCCAATAATGGCA
TCTAGGCTAGCGGCTGGTGGTCAACCCATGCCACCACTACATCCGAGTTCACAACCCATG
CTGCCACAACTTCCTTACTATTTCTTTCCTGGACAAATGTATGCGGCAGCAGTGGCAGCT
AATCAGCAGCCACCAGTGATGCCAGGTGATCCGAGCGGTGCTTTTGTCGATCGCTGGACC
TCAACTTCGTCCACTTCATCAAGTCCTACGTCACACGAAACAAACTTCGGGACACCTATT
TTAAATTCACCAGTAACGTTCAATAGCACCAAACTTTCTCCTCAGGTTCTTCATAATAGA
AGTTCGTCAGATGCATCCTCAAACTTCAAAACCAGCGTTAACGCAGTACTGTGTGGTGCC
AAACCGTCTCGCTTAATGCTACCTAATCTTTCTAACGGTCACTCATCGATGTATTTAGGA
CGTTGGGCCGGAGTAAGGGGTATAAAAAGTCCGACAGTTCCAACTGACCAAAACAATAAT
CATTCTACGCCATATGCACACGACAATGATATTATTTCAACTCCAACGTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[51-116] 5.13E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[56-116] 21.686 |
| SMART |
Homeobox_dom (IPR001356) - T[58-120] 1.0E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[59-116] 1.45484E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[59-115] 1.3E-22 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[80-91] 2.9E-7 - T[95-105] 2.9E-7 - T[105-114] 2.9E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[91-114] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GBX2_HUMAN | 56.522 % | 86.7 | 9.16E-19 |
| BARH1_HUMAN | 47.674 % | 91.7 | 1.34E-20 |
| BARH2_HUMAN | 37.908 % | 90.1 | 8.69E-20 |
