- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S297.g03542.01.t
Possible name(s)
MCTP1; MCTP2; SYT9
Gene model
Location
S297 [29,331 / 40,543]
Amino acid sequence
Length: 1,102
>Harore.CG.MTP2014.S297.g03542.01.p
RERYKMSLSYHNNNNLDLAGSGKSREISTNNESPVNKLKKKTRFGLFSFRSKKKKVVKTR
VVADDASDTVSIGSEVSASEEVACIVETEMEEERSTEKVPQRAIQQVPFEIRIETEAGEI
CEKDIIISQSAAEEPNSVTDSTLTNEENSSLTVVTMLSGDITSLGEKENIVSSQMTTMLD
ASSENLLAVGQEVIKKDIPNITENAALKTEKEIKVTTNTERRPNTISIRSLETKSVYACM
SHYQFNSPKRETLTRLRQRMTEQIPSSSADGPSLPGSPVKRQKSKRMKTSQNTSPTHNLT
VLLVNGENLAARDSNGLSDPYVKFKINGRRQYKSKICKATLNPKWDEEFTVPVRVNDVLV
VKVFDHDLAFKDDFIGCTTVELEGLVENEETETSLILQDPDCIDEHLGVINLILKITCLY
DATLQRKDVQDNGEASEINRSGSFKNADGPALSRSNSNASDASRKPAMTNASRKILKSSI
ATATVQLVSGKNLPARDSNGLSDPYVRLQLGKQRHKSKVCYKTLDPIWKEQCVFQLTGRD
SLDRELSTLEISVWDKDSYRKDDFMGRCELELWSLEYDRTHSLTLNLADSPGTIKLLVTL
HSSKPAMFPITSYELAEIRNKFALSSTFSNISEVGFIEIRIIKANNCRAADMNGKSDPYC
VVELCNMRAQTATCNKTLDPVWNKTVTFPINDIHEVLDVSVYDEDEGDANDFLGRVAIPL
LRVQDGHEKTYVLKDRKLMGRSKGTITLQIRTIYNPVNIDFKLTSGTIRAAIRSFKPREE
NVMEQEPRFKRQLLSRNFHRVWDCVQAVLQTAQFINSCFTWQNPMRSAVAFVVYLLMVWN
IDLYMIPILLLLLLIKNYISVIVQRTKVDRRVSKVDENFQEDDDEDVDESGGVRLSIMQR
LNALQEVLLKVQNVLDWAACLLERIHNTFMWSVPFLSILACIVLFIASLVLYTLSFRTIA
ILWGINKFTKRLRKPNYVPNNELLDFLCHVPSEIQLVRTSTKNSVCCKDPRRHPKNGNSS
CMVDLKAFLEDYFCSIDPYFCFQTWCKRAAFRKVPNANTNLYFNTPKFKLLSMSCSAFLI
LLIPFNPVLKFMMDITIFVKMK
Nucleotide sequence
Length: 3,776
>Harore.CG.MTP2014.S297.g03542.01.t
AGGGAACGGTACAAAATGTCTTTGTCATATCATAATAATAATAATTTAGATTTAGCAGGA
AGTGGAAAAAGCAGAGAAATATCAACAAATAATGAAAGTCCGGTAAACAAATTAAAGAAA
AAGACTCGCTTCGGGTTATTTTCTTTTCGCTCTAAGAAAAAGAAGGTAGTGAAAACCAGA
GTTGTAGCAGATGACGCAAGTGATACTGTTTCCATAGGTAGTGAAGTTTCCGCAAGTGAA
GAGGTCGCATGCATTGTAGAAACTGAAATGGAAGAAGAAAGGTCAACTGAAAAGGTGCCT
CAAAGAGCAATTCAGCAAGTGCCTTTTGAAATCCGAATAGAAACGGAGGCCGGCGAAATT
TGCGAGAAAGACATCATTATTTCACAGTCAGCAGCAGAGGAGCCAAACTCAGTAACAGAC
AGCACCTTAACGAATGAAGAAAATAGTTCCCTGACTGTGGTAACCATGCTCAGCGGGGAC
ATAACAAGCTTGGGTGAAAAAGAGAATATTGTGAGTAGCCAAATGACTACGATGTTAGAC
GCTAGTTCAGAAAACTTGTTGGCAGTCGGTCAAGAAGTGATAAAGAAAGATATTCCGAAC
ATCACCGAGAATGCTGCACTAAAGACAGAAAAAGAAATCAAAGTAACAACGAACACTGAA
AGAAGACCCAACACTATATCTATAAGGAGTTTAGAAACGAAATCAGTATACGCTTGCATG
AGCCACTACCAGTTCAATTCTCCGAAACGTGAAACTTTAACAAGACTCAGACAAAGAATG
ACAGAGCAAATTCCAAGTAGTTCTGCCGATGGTCCCAGTCTCCCTGGCTCTCCAGTGAAA
AGGCAAAAGTCAAAACGAATGAAAACGTCTCAGAACACGTCACCAACACATAACCTTACT
GTACTGCTGGTGAATGGAGAAAACCTAGCGGCGAGAGATTCAAATGGTTTAAGCGATCCA
TATGTGAAATTTAAAATCAATGGTAGAAGGCAGTACAAGAGCAAGATTTGCAAGGCGACT
TTAAATCCCAAATGGGATGAAGAGTTTACTGTCCCTGTCCGAGTCAACGATGTACTGGTA
GTGAAGGTTTTCGATCATGATTTGGCATTTAAAGATGATTTCATAGGATGTACTACTGTG
GAACTTGAAGGCTTAGTGGAAAATGAAGAAACAGAAACGTCTCTCATTCTTCAGGATCCC
GATTGCATCGATGAACACCTCGGGGTCATAAATCTTATTTTGAAAATAACCTGCTTGTAC
GATGCCACTCTTCAGCGGAAGGATGTGCAGGACAATGGAGAGGCATCGGAGATTAACAGA
TCTGGTTCGTTCAAGAATGCAGATGGACCTGCTCTCTCTCGCTCAAACAGCAATGCTTCA
GATGCCAGTAGGAAGCCTGCAATGACCAATGCAAGTAGAAAGATATTGAAATCGTCAATA
GCAACAGCAACAGTGCAATTGGTTTCAGGGAAAAATCTTCCAGCTCGTGATTCCAATGGT
CTATCAGATCCTTATGTAAGACTTCAGCTAGGTAAACAAAGACACAAAAGCAAGGTTTGC
TACAAAACTCTTGATCCTATTTGGAAAGAGCAGTGTGTGTTCCAGTTAACTGGTCGAGAT
TCGCTAGATCGTGAATTGAGTACTCTTGAAATTTCAGTTTGGGACAAAGACTCCTATAGG
AAAGATGACTTCATGGGGAGATGTGAGTTAGAATTGTGGTCGTTGGAGTATGATAGAACA
CATTCGCTTACTTTGAATCTGGCTGATTCACCGGGCACAATTAAACTGCTTGTCACTTTG
CATTCTTCCAAACCAGCAATGTTTCCGATTACAAGTTATGAACTAGCAGAAATTCGTAAT
AAATTTGCGCTTTCCTCGACTTTTTCAAACATTTCCGAAGTTGGATTTATTGAGATTCGA
ATTATCAAAGCGAACAACTGTAGGGCAGCTGACATGAATGGAAAATCGGATCCTTATTGC
GTTGTCGAACTGTGCAACATGAGGGCACAAACCGCTACATGCAACAAGACTCTCGATCCA
GTTTGGAATAAAACTGTGACTTTTCCAATTAATGACATACACGAAGTCCTTGATGTCTCG
GTATACGATGAAGATGAAGGTGACGCAAACGACTTTCTTGGTCGCGTTGCGATCCCTCTT
TTACGAGTTCAAGACGGACATGAAAAGACCTATGTTCTGAAAGACAGAAAGCTGATGGGT
CGAAGCAAGGGAACAATCACATTGCAAATTCGCACTATTTATAATCCGGTGAATATCGAT
TTTAAACTCACTTCCGGAACAATACGAGCAGCCATTCGCAGCTTTAAGCCCAGGGAGGAA
AATGTCATGGAACAAGAGCCACGATTCAAAAGACAATTGCTTAGTCGAAATTTTCACAGA
GTCTGGGATTGTGTGCAGGCCGTACTACAAACTGCACAGTTTATTAATTCTTGTTTCACC
TGGCAAAATCCAATGAGAAGTGCAGTTGCATTTGTTGTTTATCTATTAATGGTTTGGAAT
ATCGATCTGTATATGATTCCTATATTACTACTTCTTCTTCTCATCAAAAATTACATCTCA
GTCATTGTTCAAAGAACTAAAGTTGACAGAAGGGTTTCCAAAGTTGATGAAAATTTCCAA
GAAGATGATGATGAGGATGTAGATGAATCTGGAGGTGTGAGGTTGTCAATTATGCAACGT
TTAAATGCCCTACAGGAGGTTTTACTCAAGGTCCAAAACGTGCTGGATTGGGCTGCATGT
TTACTGGAACGAATACATAACACATTTATGTGGTCGGTACCTTTTCTCTCTATTCTTGCT
TGCATTGTTCTGTTCATTGCGAGCTTGGTCCTTTATACGCTGTCTTTTCGCACAATCGCA
ATACTGTGGGGAATTAACAAATTCACGAAGCGCCTTCGGAAACCAAACTATGTCCCTAAT
AATGAACTGCTCGATTTCCTATGCCACGTACCTTCAGAAATTCAACTGGTAAGGACCAGT
ACCAAGAACTCAGTTTGCTGCAAGGATCCCCGAAGACATCCAAAAAACGGAAATAGTTCT
TGTATGGTTGATTTGAAAGCTTTTTTAGAAGACTATTTCTGCTCTATTGATCCATATTTT
TGTTTCCAGACATGGTGTAAAAGAGCTGCTTTCCGAAAAGTGCCAAATGCTAATACTAAT
CTATATTTCAATACTCCGAAGTTCAAGTTACTCTCTATGAGCTGCTCAGCATTCCTTATT
TTATTAATCCCTTTCAACCCAGTTTTAAAATTTATGATGGATATCACTATCTTTGTGAAA
ATGAAGTAACTTCAACCATCCAATATTGCAGTGAATGTCAATGAATGATGACTTCCATTG
ATATTTGCCCAACAATTAGTGTTACAATTCGTTTAGGCAATTCTGTGCATGATTTAATGA
GATCACTTTTGTTATTCAAACGAACAAACATGATTATTTTCCAATGTTTGAATTGAGTAT
TAGTTAATGGAGAGTTACAACCATTAATTGCGTTACGAAAAGTTCCATTCCGAAAACACA
CATGTTCACTAAACATTTTGAGGTCATGATAAAATACTGAATGATTATTTATTATTGTGT
TTTATGTATATGCAATATCCGAATTTATTGAATGTTCCAGGATCATATTATTCCTAGCAT
TAATTCATCACAAATAATGTTTTTGATAACTGTTCTAATTACTGTTGATATATATCTTTC
ATTCGTTATATTGGAAGCTGGTGATATTGATTAACATTCAATAAATTTAACTCAAC
| Gene3D |
C2_domain_sf (IPR035892) - T[292-440] 6.9E-29 - T[467-602] 1.7E-31 - T[634-755] 8.0E-34 |
| SMART |
C2_dom (IPR000008) - T[298-394] 4.9E-20 - T[482-584] 1.8E-18 - T[636-732] 1.6E-18 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[298-379] 15.784 - T[484-569] 16.924 - T[637-717] 14.793 |
| Pfam |
C2_dom (IPR000008) - T[298-393] 7.6E-22 - T[484-579] 3.1E-21 - T[637-729] 5.9E-21 |
| PRINTS |
C2_dom (IPR000008) - T[652-664] 3.6E-5 - T[676-689] 3.6E-5 - T[697-705] 3.6E-5 |
| Pfam |
PRibTrfase_C (IPR013583) - T[857-974] 1.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MCTP1_HUMAN | 40.293 % | 520 | 9.81E-168 |
| MCTP2_HUMAN | 36.999 % | 469 | 1.57E-149 |
| SYT9_HUMAN | 29.897 % | 92 | 3.17E-19 |