- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.C9.220.v1....' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Molecular Tool 'Ci-FoxD::Tbxa' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S28.g13605.03.t
Possible name(s)
AVPR1A; AVPR1B; GNRHR
Gene model
Location
S28 [423,127 / 436,032]
Amino acid sequence
Length: 458
>Harore.CG.MTP2014.S28.g13605.03.p
MAFQSYNKSITRYGSETTSRQKSSLLYTITRSSFPSDEPAIYSEVTTSSQLSFGTVKSSN
FTDDVLGTTSFVTSTEMSFADSSFLSSIYNDTNVTLSPDECDDKLELLKKEYKLLFDHTQ
LIRISVTWSLFLISAIGNLFVLTSLTVRRKRKHRSNAQLLMMHLTFANLAFTFFFIPIDA
IWQTTVEWKGGEVLCRITNVLKQFSMYISSAIIVGVVFSVMSKPLAGCPGYFVTQCVDLR
ISAGVNLKPYYVYTMIISFFAPLVCILVCYILIAIAISKMAKISKEAEKRCSLKVRDNSK
RSITRKSLDRAQKMSKIVTALITATFVLCWGPYYVAGLIYWFDREDSSVPDQQAITRTAT
MVMLLSVYLNPCLHPLITVLLMKEVRDNLFSQCRIVRSPGPRLPPRKISSHNKKKKKASV
VIRGNKNGTKELLANENGSPDPVYTGNGKDDLLGEAML
Nucleotide sequence
Length: 2,537
>Harore.CG.MTP2014.S28.g13605.03.t
AGTTCCACCACATAATGATTTAACGATATACGTATATGTTTGTTGTTCCAAAACTTACAT
TTCTTGCTGTCACAACATATCATAGACGTGATTCGGCGAAGGAAATCGTCAGGGTATTTT
TCACCGAAACCGAGGAATTACAAGTCTGAAAATACATTACATTCAACGAAAAGATAGAAA
TCAAAGGGAAAAAATTGGCGTCACTCTCGTTCCAGCGAAGAAGATCACCATGGCTTTCCA
AAGCTACAATAAATCGATTACGAGATATGGGAGCGAAACGACTTCTCGACAGAAATCTTC
GCTGCTGTACACCATTACTCGATCTTCCTTCCCGAGCGACGAGCCAGCAATCTACAGCGA
AGTAACTACGAGCAGCCAGTTAAGTTTCGGCACTGTGAAATCAAGCAATTTTACGGACGA
CGTCCTTGGCACTACAAGCTTTGTCACGTCAACAGAAATGTCGTTTGCCGACTCAAGTTT
TCTGTCCTCCATTTACAATGATACGAACGTAACTTTGAGTCCGGATGAATGCGATGACAA
GTTGGAGTTGCTCAAAAAAGAGTACAAACTCCTGTTCGATCACACACAACTGATAAGAAT
CTCTGTCACGTGGTCACTCTTCCTCATTTCGGCCATTGGAAACTTGTTTGTTCTGACGAG
TTTAACTGTACGTCGCAAGCGAAAACATCGTTCGAACGCCCAACTCTTGATGATGCATCT
TACTTTCGCCAACTTGGCTTTCACGTTTTTCTTCATACCTATCGACGCCATTTGGCAAAC
TACCGTGGAATGGAAAGGAGGTGAGGTCCTATGTCGAATTACCAACGTGCTCAAACAGTT
TTCCATGTATATTTCATCAGCAATAATTGTGGGAGTTGTTTTCTCTGTTATGTCGAAACC
ACTTGCCGGATGCCCGGGGTATTTCGTTACGCAGTGCGTCGATCTCCGAATCAGTGCCGG
AGTCAACCTAAAACCTTATTACGTTTACACGATGATCATATCTTTCTTCGCTCCGCTTGT
TTGCATCCTGGTCTGTTATATTCTTATCGCCATAGCGATATCAAAGATGGCAAAAATCTC
CAAAGAAGCGGAAAAAAGATGTTCTCTCAAGGTTCGTGATAACTCTAAAAGAAGCATTAC
ACGGAAAAGCTTGGATCGCGCGCAAAAGATGTCGAAAATCGTAACCGCCCTTATCACTGC
GACCTTCGTTCTTTGCTGGGGACCGTACTATGTGGCGGGATTAATATACTGGTTCGACAG
AGAAGACTCTTCAGTGCCTGACCAGCAAGCAATCACTCGCACAGCGACCATGGTGATGCT
GTTGTCAGTATATCTGAATCCATGTCTTCATCCACTCATCACTGTTTTACTGATGAAGGA
AGTTAGAGACAATCTCTTTTCTCAGTGTCGCATTGTTAGAAGTCCTGGACCAAGACTGCC
ACCTCGTAAAATCAGCAGCCACAACAAAAAGAAAAAAAAAGCATCTGTAGTGATAAGAGG
CAACAAAAATGGCACGAAAGAATTACTTGCCAATGAAAACGGAAGTCCTGATCCCGTGTA
CACTGGGAACGGGAAGGACGATCTCCTCGGTGAAGCAATGTTGTGATATTTTTCACATTT
TCAGTATTTCCAAAACATTAGGGATTAGTCGCACGAACTATGACAACACTGCGATTGGTG
CCGCCTAAATAGCGCGGATATTAGCGGTGAAGATTCGGATGGAGCACTGGACACATTTTC
TTTGGTATGCATGAAATACGGTGTGAAAGGAACTAAAATCTGCACCAACAAAAGCTTAAC
TGTGAGCAATCGTATTTCCAAGGAATCTTTGCACGTAATAATATTTTATATAAACACTGC
ACAATGATTTATCACACACATCGATCAGTGTACGCATACTGGTTTCCAAAATGCTCTCGA
TCTTCACCTAGCGGACATTAATTTCCCAACAAGCTAACATTTGTAATTACTCATAACATC
AGTCTGTGAGTGTCAACACCCTGGCGAATTGAGCCTCTCGAATTTCCACTACGCACATAA
GTTGCCGGAATAATTGAAAGGCAATTCTTTCTTAGGCATAATGTGTGACACAACGAATCG
CCCGCTATTTATTGTCGAATTCGTTAAAATTTAAATGTAGCAATATTATGTCAAATATAA
TAATTTAGATTTAGTTATAGCTCTTTCGTTATATAATCTTTTAATTTCATATATATCAAC
CCAATGTTAGACCCACAGGCATTGCTATTGTTTTATATGGTTAAACCTAGTCTCAATACA
GTCCCTCAGAAAAGAGTATAAAATAGGCCCCTGCTTGCTGCGACCTGCTTGGCATTCTGC
ACCCCTCTACTCCTGAGCTCTCTCTGGAGCTTCAACTGCTATCTGCATTCATAATATATG
GTGAAAATGACAATTTGTCGGCAATACCAACTAAACTCATTGAATTATATCTTTCCTTGC
AATGAAATCATGTTCTTCATTCATTAAATAGAGCAACTATTCATTTAAAGCATTTCCTTT
ATATTCTACGTCTTACT
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[122-146] 2.3E-17 - T[157-178] 2.3E-17 - T[251-274] 2.3E-17 - T[315-339] 2.3E-17 - T[360-386] 2.3E-17 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[137-213] 1.8E-9 - T[235-377] 3.5E-16 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[137-218] 11.565 - T[236-378] 15.116 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GNRHR_HUMAN | 28.808 % | 108 | 1.71E-26 |