- Clone 'cien189841' >
- EST 'AHC0AAA223YO01_RM1' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S28.g12725.01.t
Possible name(s)
STOM; STOML1; STOML3
Gene model
Location
S28 [284,578 / 285,781]
Amino acid sequence
Length: 400
>Harore.CG.MTP2014.S28.g12725.01.p
MYSYRPLAQNTNVDYRSTFKFSGDKAYTEEVYGATTADFPNVQYMNASQTWIDSFCTSVI
KILSYFLFIATLPFSAIFCFKLAHQYERIVMYRMGRLTPLKGPGIVLVLPCIDRWNKVDM
RTKAFNIPPSRVVTKDRCLLVIGGVIHFRVQNPIIATNSVQDLNHSVRVIAQTVMSSVLS
KKMLPEIMSNRIRYNYDIQMEINEVAKDWGIEIGRVELSQPTVEATPQALLNGGQNNSQS
QQSFQMPGFSDGDSTMAGLAQFAQQFLAKQMTVQPPAVKEIMEGEEDENNEMSAEDILNA
AEMFITEDLVAKIDATYEIKLTDNNETYYLDLKSGAGSCGKGSLPSGEEADAFLTMSLFT
MRKLLSGKIGPFSAYTNGKLKLKGNLKMAMRLDELVKCLK
Nucleotide sequence
Length: 1,203
>Harore.CG.MTP2014.S28.g12725.01.t
ATGTACAGCTACCGCCCTCTCGCACAAAATACGAACGTGGATTACAGATCGACATTCAAG
TTTTCCGGAGATAAGGCTTATACAGAAGAGGTGTATGGCGCTACAACAGCAGACTTTCCG
AACGTGCAGTACATGAATGCATCTCAGACTTGGATCGATTCTTTCTGCACAAGTGTCATA
AAAATATTGAGTTATTTCCTGTTTATAGCAACTCTACCTTTCTCTGCAATATTTTGTTTC
AAATTGGCGCACCAGTATGAGCGGATTGTCATGTACAGAATGGGTCGACTCACACCGCTC
AAGGGCCCTGGCATCGTGCTTGTGTTGCCGTGCATTGACAGATGGAATAAGGTGGACATG
CGTACAAAAGCATTCAATATTCCTCCCAGCAGAGTTGTCACAAAAGACCGGTGCTTGCTT
GTGATTGGAGGTGTGATCCATTTCAGAGTACAAAATCCAATAATAGCTACTAATTCTGTG
CAAGATTTGAATCATTCAGTAAGAGTGATTGCCCAGACAGTGATGTCTTCCGTTCTTTCC
AAAAAAATGCTTCCAGAGATCATGAGCAACAGAATAAGGTACAACTATGATATCCAAATG
GAAATCAATGAAGTCGCAAAAGACTGGGGAATAGAAATCGGTAGAGTTGAACTATCGCAG
CCGACGGTGGAAGCAACACCTCAAGCCTTGTTAAACGGTGGCCAAAACAATAGCCAGAGT
CAGCAGTCTTTTCAAATGCCAGGTTTCAGTGACGGTGATAGCACTATGGCAGGCTTGGCA
CAGTTCGCACAGCAGTTCCTGGCCAAGCAAATGACAGTGCAGCCACCAGCAGTGAAGGAA
ATAATGGAAGGTGAAGAGGACGAAAATAATGAGATGAGTGCTGAAGACATTCTGAACGCT
GCAGAAATGTTTATCACTGAAGATCTAGTTGCAAAAATTGATGCTACGTATGAAATTAAG
CTTACAGACAACAATGAAACATATTATCTGGACTTAAAATCTGGAGCGGGTAGTTGCGGA
AAAGGTTCACTACCCTCGGGTGAAGAAGCTGACGCTTTTCTAACCATGTCGCTTTTTACG
ATGCGAAAATTACTTTCGGGTAAAATTGGACCGTTTTCAGCTTACACCAATGGTAAGCTG
AAACTGAAAGGCAATCTGAAAATGGCAATGAGGCTCGATGAACTGGTCAAGTGTCTAAAA
TGA
| PANTHER |
SLP1 (IPR028517) - T[41-400] 1.5E-96 |
| SMART |
Band_7 (IPR001107) - T[78-235] 3.1E-31 |
| Pfam |
Band_7 (IPR001107) - T[84-236] 5.2E-15 |
| PRINTS |
Stomatin_fam (IPR001972) - T[85-107] 6.8E-21 - T[132-153] 6.8E-21 - T[167-184] 6.8E-21 - T[187-210] 6.8E-21 - T[211-229] 6.8E-21 |
| SUPERFAMILY |
Band_7/SPFH_dom_sf (IPR036013) - T[109-222] 3.66E-21 |
| Gene3D |
SCP2_sterol-bd_dom_sf (IPR036527) - T[286-399] 1.8E-22 |
| SUPERFAMILY |
SCP2_sterol-bd_dom_sf (IPR036527) - T[297-396] 7.65E-21 |
| Pfam |
SCP2_sterol-bd_dom (IPR003033) - T[306-397] 3.8E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STOM_HUMAN | 35.758 % | 137 | 1.14E-37 |
| STML3_HUMAN | 36.97 % | 133 | 3.25E-36 |
| STML1_HUMAN | 33.588 % | 232 | 8.37E-73 |