- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S28.g00713.01.t
Possible name(s)
ACLY; SUCLA2; SUCLG1
Gene model
Location
S28 [208,188 / 217,330]
Amino acid sequence
Length: 1,098
>Harore.CG.MTP2014.S28.g00713.01.p
MSAKAITEFTGKTLLSKHLHSCSNLQNRFKFLEVDANTDFSSLLEKHPWISNEKLIVKPD
QLIKRRGKLGLIKLNVDLNGVKEWVSNNATKEIVVGTTTGILKHFIVEPFIPHEQEEEFY
ICIYGTRSGNCILFHHEGGVDVGDVDAKACKMEVDIDDDISEQSVVEKLINRVPKECHEA
LAKFIVDLFAVYHSLHFTYLEINPLVMKGKDIYVLDMAAKLDQCAEYLCARDWGGSLEFP
PPFGREAYPEEAYIADLDAKSGASLKLTILNPNGRIWTMVAGGGASVVYSDTICDLGGAS
ELANYGEYSGAPSEQQTYDYARTILSLMTREKRTDGKVLIIGGGIANFTNVAATFKGIVR
ALKEYQTKLQDNKVSVFVRRGGPNYQEGLRVMREVGQSLGVPMHVFGTETHMTAIVGMGL
GKTPIPQKPPVDAGHTANFLLGATSSYNGTTPRTSRTSSFADDQKQPKDNGDVNILRQAA
QKVAMRKPLFTAKTQALIWGLQSRAVQGMLDFDFICSRKAPSVAAMVYPFSDDHKLKFYW
GHKEILIPVYKNMSDAMERHKHADTLVNFASLRSAEESTIEAMQYPQIRTIAIIAEGIPE
AKTKKLNKLAKEKHITIIGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRS
GGMSNELNNIISRNTNGVYEGVAIGGDRYPGTVFMDHIMRYQLEHDVKMIVVLGEVGGKE
EYDICNAINSGKINKPVVAWCIGTCATMFNSEVQFGHAGACANQECETAAAKNKALAAAG
AFVPASFDELNLKIKEVYEDLVNRNVIIPAEEVPPPTVPMDYSWARELGLIRKPASFMSS
ISDERGQELMYAGMPISRVFKDDLGIGGVLGLLWFQKRLPVYACKFLEHCLMVTADHGPA
VSGAHNTIICARAGKDLISSLTSGLLTIGDRFGGALDGAAKQFSRAYDCGLLPNEFVNEM
RKKHQLIMGIGHRVKSINNPDQRVVILQEFVKANFPCTPLLDYARKVEKITTAKKPNLIL
NVDGFIGVAIVDLLRNSGCFTSEEAAEYVEIGALNGIFVLGRSMGFIGHYLDQRRLKQGL
YRHPWDDISYVLPETYSS
Nucleotide sequence
Length: 3,297
>Harore.CG.MTP2014.S28.g00713.01.t
ATGTCAGCTAAGGCGATCACCGAATTCACTGGAAAGACTCTTCTTTCTAAGCATTTGCAC
TCTTGCTCGAATTTGCAAAACAGATTCAAATTCCTCGAGGTTGATGCAAATACGGATTTC
AGTTCACTGCTGGAAAAGCATCCTTGGATCTCCAACGAGAAACTTATTGTGAAACCTGAT
CAGCTGATCAAACGTCGGGGTAAACTCGGCCTCATCAAGCTCAATGTTGATTTGAATGGT
GTAAAGGAATGGGTTTCCAACAATGCTACGAAAGAAATAGTAGTCGGGACAACTACAGGC
ATCTTGAAACATTTCATTGTGGAGCCGTTCATACCACATGAGCAGGAAGAAGAATTTTAT
ATATGCATTTACGGAACTCGTTCAGGTAACTGTATTCTTTTCCATCATGAAGGAGGTGTT
GATGTTGGGGATGTTGATGCTAAAGCATGTAAAATGGAGGTCGATATTGACGATGACATT
TCTGAGCAAAGTGTTGTTGAAAAACTGATCAACAGAGTTCCAAAAGAATGTCATGAGGCT
CTCGCAAAATTCATTGTAGACCTTTTTGCTGTGTATCATTCTTTACATTTTACCTACCTA
GAAATAAATCCACTTGTGATGAAAGGAAAAGATATCTATGTTTTGGACATGGCTGCAAAA
TTGGATCAGTGTGCCGAGTATTTGTGTGCCCGCGACTGGGGTGGGAGCCTGGAGTTTCCT
CCCCCATTTGGCCGTGAAGCATACCCCGAAGAGGCTTACATTGCAGACCTCGATGCTAAA
AGCGGAGCATCACTAAAACTCACGATTCTCAACCCGAACGGCCGAATATGGACCATGGTT
GCCGGTGGAGGAGCATCTGTGGTTTATAGTGACACGATATGTGATCTTGGCGGAGCATCC
GAACTGGCAAACTATGGGGAATATAGTGGTGCTCCTAGCGAACAGCAAACTTACGATTAT
GCAAGAACGATACTTTCCCTCATGACACGAGAGAAACGCACAGATGGGAAAGTTTTGATA
ATCGGCGGTGGAATTGCAAATTTTACAAATGTGGCTGCTACATTCAAGGGCATTGTCCGT
GCATTAAAAGAGTACCAGACCAAATTACAAGACAACAAAGTTTCTGTTTTCGTTCGTCGT
GGTGGTCCTAACTACCAGGAAGGTCTAAGAGTCATGAGAGAAGTTGGTCAGAGCTTAGGT
GTTCCCATGCATGTATTCGGCACTGAGACCCACATGACGGCAATAGTTGGAATGGGCCTT
GGCAAGACTCCTATTCCCCAAAAACCACCAGTAGATGCAGGGCACACGGCAAACTTTCTC
CTTGGTGCGACGAGCAGCTACAACGGAACTACACCTCGTACCAGCAGGACGAGTTCATTC
GCTGATGACCAGAAGCAACCAAAGGACAATGGAGATGTTAATATTCTAAGGCAGGCTGCA
CAGAAAGTGGCTATGAGAAAACCTTTGTTCACTGCTAAAACTCAGGCCTTGATCTGGGGA
CTGCAATCACGTGCTGTGCAAGGTATGCTTGATTTTGATTTCATATGTTCAAGGAAGGCT
CCATCAGTAGCTGCCATGGTGTACCCATTCAGTGATGACCACAAGCTCAAGTTCTATTGG
GGTCACAAGGAGATCCTCATTCCGGTGTACAAGAACATGAGCGATGCAATGGAAAGGCAT
AAGCATGCTGATACGCTGGTTAACTTCGCTTCTCTTAGATCGGCTGAGGAGAGTACGATA
GAGGCTATGCAATATCCACAGATTCGTACGATTGCTATCATTGCAGAAGGAATTCCAGAA
GCCAAAACAAAGAAGCTGAACAAACTGGCCAAAGAGAAACACATTACAATAATTGGACCA
GCTACAGTGGGTGGTATCAAGCCTGGCTGCTTTAAGATAGGCAACACCGGTGGCATGATG
GACAACATTCTTGCTTCTAAACTGTACAGACCTGGAAGTGTAGCCTATGTGTCTAGAAGT
GGTGGAATGTCTAATGAGCTGAACAACATTATCTCCAGAAATACAAACGGAGTTTATGAA
GGAGTTGCGATCGGTGGTGATAGATACCCCGGCACAGTTTTCATGGATCACATAATGCGA
TATCAATTAGAGCATGATGTTAAAATGATTGTGGTTCTTGGAGAGGTCGGGGGCAAAGAA
GAATACGATATCTGTAATGCGATCAACTCTGGGAAGATCAACAAGCCAGTTGTTGCATGG
TGCATAGGCACTTGTGCAACAATGTTCAACTCTGAAGTGCAATTTGGCCATGCAGGTGCC
TGTGCTAACCAGGAGTGCGAGACTGCTGCAGCAAAAAACAAAGCATTAGCAGCAGCTGGT
GCATTTGTTCCAGCCAGTTTTGATGAGCTGAATCTAAAAATAAAAGAAGTGTATGAAGAC
CTGGTCAATCGCAATGTTATCATTCCAGCTGAGGAAGTCCCTCCTCCGACAGTGCCTATG
GATTATTCATGGGCTAGGGAACTCGGACTGATTAGGAAGCCAGCGTCCTTCATGTCCAGC
ATATCTGACGAACGTGGACAAGAGCTTATGTACGCCGGAATGCCTATATCCCGCGTGTTC
AAGGATGACCTTGGCATAGGTGGAGTGCTGGGTCTTCTCTGGTTCCAAAAAAGATTACCG
GTGTATGCATGCAAATTCCTTGAGCATTGCCTAATGGTAACTGCTGACCATGGACCAGCT
GTTTCAGGAGCACACAATACAATCATATGTGCGCGAGCCGGGAAAGATCTCATCTCTTCT
CTCACTTCTGGTCTCCTGACTATAGGTGACAGATTCGGAGGTGCACTCGACGGAGCGGCT
AAACAGTTCAGCCGTGCCTACGACTGCGGGCTACTCCCGAACGAGTTTGTCAATGAAATG
AGGAAAAAGCATCAATTGATTATGGGAATAGGACATCGTGTAAAATCGATAAATAATCCC
GATCAGAGAGTTGTCATTTTGCAAGAGTTTGTGAAGGCTAATTTTCCATGTACGCCACTG
TTGGATTATGCAAGAAAAGTGGAAAAAATCACAACAGCTAAGAAGCCGAATTTAATTTTG
AATGTCGACGGCTTCATCGGGGTAGCGATTGTAGATTTGTTGCGTAACAGTGGCTGTTTT
ACCAGCGAGGAAGCAGCAGAATATGTTGAGATTGGCGCTCTCAATGGCATTTTTGTTCTG
GGAAGGTCGATGGGTTTCATCGGCCACTATTTAGACCAGCGTCGACTAAAGCAGGGTCTA
TACAGACACCCTTGGGATGACATCAGCTATGTCCTCCCTGAAACCTATTCGTCTTAG
| PIRSF |
ATP-citrate_synthase (IPR014608) - T[1-1098] 0.0 |
| Pfam |
ATP-grasp_succ-CoA_synth-type (IPR013650) - T[47-206] 2.9E-9 |
| Pfam |
Citrate-bd (IPR032263) - T[245-421] 1.6E-93 |
| Gene3D |
Succinyl-CoA_synth-like (IPR016102) - T[247-408] 3.2E-80 - T[622-817] 2.0E-66 |
| SUPERFAMILY |
Succinyl-CoA_synth-like (IPR016102) - T[263-410] 3.4E-24 |
| ProSitePatterns |
Succ-CoA_synthase_bsu_CS (IPR017866) - T[274-299] . |
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[490-620] 9.19E-17 |
| Pfam |
CoA-bd (IPR003781) - T[492-597] 7.9E-11 |
| SUPERFAMILY |
Citrate_synthase_sf (IPR036969) - T[614-1093] 1.18E-74 |
| Pfam |
CoA_ligase (IPR005811) - T[657-781] 4.7E-16 |
| ProSitePatterns |
Citrt_syn/SCS-alpha_CS (IPR033847) - T[658-687] . |
| ProSitePatterns |
Cit_synth/succinyl-CoA_lig_AS (IPR017440) - T[743-759] . |
| Pfam |
Citrate_synthase (IPR002020) - T[883-1078] 2.5E-17 |
| Gene3D |
Citrate_synth-like_sm_a-sub (IPR016143) - T[938-1032] 6.4E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACLY_HUMAN | 71.196 % | 1655 | 0 |