- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S27.g15406.01.t
Possible name(s)
CPNE1; CPNE2; CPNE3
Gene model
Location
S27 [218,046 / 219,693]
Amino acid sequence
Length: 548
>Harore.CG.MTP2014.S27.g15406.01.p
MAALSLSVCVSKVELSISCTDLIDKDVMSKSDPICIVKGLDEATNKWQELGRTERIKNNL
NPDFIKKIALSYYFEEVQKLKIRIHDVDNETQTLDDDDFLGEVECTLGQIVSRKIFQSPL
FIKDKKTAGRGAIKIVAEQVTDNRQLSISFKANKLDNKDFMGKSDPYLEFWRKNDDGTWT
IAHRTEVIKNTLNPVWKPMEIPLHSLCGGDLERQVKIVCNDWDSDGSHDLIGEAFTTVSE
IEKASKPKEFPCVNPKKKAKKSSYKNSGIISVMGSKIVKNYSFVEYLFGGLQINFTVGID
FTGSNLAPDMPGSLHNILDGFQNEYVQALKAVGNVIQDYDADKLFPAFGFGAKVPPHNTL
SHEFPLNFNMDNPYCAGIDGIFHAYTEAVMRVKLWGPTNISPIINHVARFAYQAQNTQTT
PQNYFVLLLITDGVITDMDETRTAIVNASHLPMSIIIIGVGKADFSAMEILDGDDGVLKS
PTGQPVARDIVQFVPFRDYQGSSKAMLAKAVLAEIPSQVTKYFKTKNMSPGNPPLMNPLA
QQKEAATK
Nucleotide sequence
Length: 1,647
>Harore.CG.MTP2014.S27.g15406.01.t
ATGGCCGCGTTATCACTATCCGTATGCGTATCTAAAGTAGAGCTGTCGATCTCTTGTACC
GATTTGATCGACAAAGATGTCATGTCCAAATCCGACCCTATCTGTATAGTCAAAGGCTTG
GACGAAGCCACGAACAAGTGGCAGGAGTTAGGTAGAACAGAAAGAATAAAAAACAATTTG
AATCCAGACTTCATCAAAAAGATAGCACTCAGTTATTACTTTGAGGAAGTGCAGAAACTG
AAGATCCGAATTCATGACGTCGATAACGAAACGCAAACGCTGGACGACGACGATTTCCTC
GGCGAAGTCGAATGCACACTTGGGCAGATCGTATCCCGCAAGATTTTTCAAAGTCCGTTG
TTTATCAAGGACAAAAAAACTGCCGGCAGAGGAGCAATAAAAATAGTGGCTGAACAAGTG
ACTGATAATAGGCAGCTATCAATATCCTTCAAAGCAAATAAACTGGACAACAAGGATTTC
ATGGGAAAATCTGATCCTTATCTGGAATTCTGGAGGAAGAACGACGACGGAACATGGACT
ATTGCACATCGAACAGAGGTAATTAAAAACACTTTGAATCCGGTTTGGAAGCCTATGGAA
ATACCATTGCACAGTCTTTGTGGAGGGGACCTGGAGAGACAAGTAAAAATTGTTTGCAAT
GACTGGGACAGCGATGGCAGCCATGACCTCATTGGAGAAGCTTTCACAACGGTGTCAGAA
ATTGAGAAGGCTTCAAAGCCGAAAGAGTTTCCTTGTGTTAATCCCAAGAAGAAAGCGAAG
AAGTCGTCATATAAAAATAGTGGAATCATATCGGTTATGGGAAGCAAGATAGTAAAGAAT
TACAGCTTTGTTGAATATTTATTTGGTGGCCTCCAAATCAACTTCACTGTCGGAATCGAC
TTCACAGGATCTAATTTAGCCCCCGACATGCCGGGATCTTTGCATAACATTCTTGATGGT
TTCCAAAACGAATATGTCCAAGCTCTGAAGGCAGTGGGAAATGTTATTCAAGATTACGAC
GCGGATAAGCTGTTCCCTGCCTTTGGATTCGGGGCCAAGGTTCCTCCCCATAACACATTG
TCTCATGAATTTCCTCTCAATTTTAACATGGACAATCCCTACTGTGCTGGAATCGATGGA
ATATTTCATGCTTACACAGAAGCGGTGATGAGAGTGAAGCTATGGGGCCCAACAAACATA
TCACCTATTATAAACCATGTAGCAAGATTTGCCTACCAAGCTCAAAACACACAGACAACT
CCACAAAATTATTTTGTGCTTCTTCTTATAACTGACGGCGTCATAACAGATATGGACGAA
ACCCGAACAGCTATTGTCAATGCGTCTCATCTACCCATGTCCATAATAATTATTGGTGTT
GGAAAGGCTGATTTCTCTGCCATGGAGATCCTAGATGGGGATGATGGAGTTCTTAAATCT
CCCACAGGACAACCAGTAGCTCGAGACATAGTGCAATTCGTTCCTTTTCGAGATTATCAA
GGGTCGAGTAAAGCAATGTTGGCAAAGGCAGTGCTGGCTGAGATTCCCTCTCAAGTGACG
AAATACTTTAAAACCAAGAATATGTCACCTGGTAATCCACCATTGATGAATCCTTTGGCT
CAACAAAAAGAAGCTGCGACTAAATAA
| ProSiteProfiles |
C2_dom (IPR000008) - T[1-104] 9.924 - T[151-235] 9.894 |
| Gene3D |
C2_domain_sf (IPR035892) - T[9-137] 2.0E-16 - T[138-273] 3.9E-20 |
| SMART |
C2_dom (IPR000008) - T[11-119] 6.5E-5 - T[145-250] 4.6E-8 |
| Pfam |
C2_dom (IPR000008) - T[17-114] 8.5E-11 - T[151-245] 5.0E-11 |
| CDD |
C2B_Copine (IPR037768) - T[146-254] 2.73157E-53 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[292-493] 1.74E-18 |
| SMART |
VWF_A (IPR002035) - T[292-495] 2.0E-8 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[309-514] 2.6E-5 |
| Pfam |
Copine (IPR010734) - T[313-530] 1.6E-83 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CPNE1_HUMAN | 54.167 % | 606 | 0 |
| CPNE3_HUMAN | 59.659 % | 622 | 0 |
| CPNE2_HUMAN | 56.084 % | 604 | 0 |