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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S27.g13478.01.t

Possible name(s)

CPNE1; CPNE2; CPNE3

Gene model

Harore.CG.MTP2014.S27.g13478

Location

S27 [221,410 / 222,968]

Sequences

Amino acid sequence

Length: 379

>Harore.CG.MTP2014.S27.g13478.01.p
MCSDWDSNGKHDLIGEFYTTVGRIRDAATTPQNFPCVHPKKKAKKSFYKDSGVVTITGSK
IENSFSFLEYLFGGLQIHFTVGIDFTGSNGDPTTPDSLHYIRHGIQNEYIRALISVGNVV
QDYDSDKQFPAFGFGAKIPPRETLSHEFPLNFNMDNPYCIGINGILSAYQQAVKRIKLWG
PTNIAPIINHVARFAQEAQDTQKTPENYYVLLLITDGVVTDIDETRTAIVNASQLPMSII
IVGVGNADFTDMEMLDGDDGILKSPTGQPSARDIVQFVVFQDYATKTKEMLAKAVLAEVP
AQIKQYFRQRDMPPGVPSSTQVHCPSKTVVANLMFAAHEGVVHCTELKFENVRTYVFCCW
PAKCNVVMVADMLSTTGCN

Nucleotide sequence

Length: 1,140

>Harore.CG.MTP2014.S27.g13478.01.t
ATGTGCAGCGACTGGGATAGTAATGGAAAGCATGACTTGATAGGGGAATTTTACACTACT
GTAGGTAGAATAAGAGACGCCGCCACAACTCCGCAGAATTTTCCCTGTGTACATCCAAAG
AAAAAGGCTAAGAAATCCTTCTACAAAGATTCAGGCGTGGTAACTATAACTGGATCGAAG
ATTGAGAATTCCTTCAGCTTTTTAGAATACCTCTTCGGAGGTCTTCAAATCCATTTCACA
GTGGGGATCGACTTCACGGGATCGAATGGCGATCCCACAACACCGGACTCTTTACATTAT
ATCAGACACGGTATCCAGAACGAATATATTCGTGCACTTATATCGGTTGGCAACGTGGTT
CAAGATTACGACAGCGACAAGCAGTTTCCAGCCTTTGGATTTGGCGCTAAGATACCTCCA
CGCGAAACTTTGTCACACGAGTTTCCTCTCAACTTCAACATGGACAACCCGTACTGCATC
GGCATTAATGGAATACTATCGGCATATCAGCAAGCTGTGAAAAGAATCAAGTTGTGGGGC
CCGACAAATATTGCGCCGATAATTAACCACGTGGCCCGATTCGCCCAAGAAGCTCAGGAC
ACACAAAAGACGCCGGAAAATTATTACGTTCTTCTTCTGATAACGGATGGCGTTGTCACC
GATATAGATGAGACTCGTACAGCTATCGTCAATGCCTCCCAACTACCCATGTCAATCATA
ATCGTTGGGGTCGGAAATGCTGATTTCACTGACATGGAGATGCTAGACGGAGACGACGGA
ATCCTCAAATCTCCCACTGGTCAACCTTCGGCACGCGACATAGTGCAGTTTGTGGTGTTC
CAGGATTACGCAACAAAAACCAAAGAAATGTTGGCGAAAGCAGTTCTTGCAGAGGTTCCA
GCGCAAATCAAGCAATATTTCAGGCAAAGGGACATGCCGCCAGGTGTTCCCTCCAGTACA
CAAGTGCATTGTCCATCGAAAACAGTGGTTGCCAACCTAATGTTTGCAGCACACGAAGGG
GTGGTACATTGCACGGAATTAAAATTTGAAAACGTTAGGACATATGTTTTTTGTTGTTGG
CCTGCAAAGTGTAATGTTGTCATGGTAGCAGACATGTTGTCAACGACTGGCTGCAACTAA

InterProScan

SMART
VWF_A (IPR002035) - T[76-280] 4.4E-11
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[77-278] 2.22E-20
ProSiteProfiles
VWF_A (IPR002035) - T[78-299] 8.703
Pfam
Copine (IPR010734) - T[97-314] 5.5E-85
Gene3D
vWFA_dom_sf (IPR036465) - T[105-284] 9.4E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CPNE1_HUMAN 55.352 % 380 1.07E-128
CPNE3_HUMAN 57.453 % 362 9.15E-122
CPNE7_HUMAN 56.113 % 367 1.69E-122