- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S27.g07299.01.t
Possible name(s)
CPNE5; CPNE8; CPNE9
Gene model
Location
S27 [93,237 / 101,114]
Amino acid sequence
Length: 576
>Harore.CG.MTP2014.S27.g07299.01.p
MAFAQPAPPYTAAPQNSNFGRSTAPSLSGEEAWNSQPVFAVELSLSCRKLIDADVFSKSD
PMVVMFVQGIGSKEWREFGRTEVIMNTLNPDFVKKFVIDYFFEERQALRFDVYDIDSKNQ
SLSKHDFLGQCFCSLGEIVGSLGSKFQAPLKIDTRAKGQIIITAEELDGSKDVAKMQWNG
RKLDKKDFFGKSDPFMVFCRCNEDNSFTVCHKSEVIKNTLNPNWKPMEIPVRTLCNGDYD
RTIKVEVYDWDRDGGHDLIGIFATSIRQMLAGPGIENTYECINPKKREKKKKNYKHSGLV
NLLSFKIEKQATFLEYIQGGTELNFVVAIDFTASNGNPLQPNSLHYVNPYVPNQYALAIQ
AVGDIIQDYDSDKLFPAFGFGARLPPNGQVSHQFPINFKPDTPSCHGIQGVMEAYQSCIR
KVQLYGPTNFSPIIRNVASMASQISDASQYFVLLMITDGVISDMGATREVIVKAARLPMS
IIIIGVGNDEFEAMEELDGDTVRLSHRGIQAERDIVQFVPFRDFVAQGRSQILSQARLAK
EVLAEIPDQVVSYMKSRNLKPGPLPPSYCAVDPLQK
Nucleotide sequence
Length: 1,731
>Harore.CG.MTP2014.S27.g07299.01.t
ATGGCTTTTGCACAGCCAGCTCCTCCTTATACTGCGGCACCACAAAATTCAAATTTTGGA
AGATCTACCGCACCCTCCTTATCAGGAGAAGAAGCATGGAATTCACAGCCAGTATTCGCA
GTAGAGCTGTCCTTATCATGCAGAAAACTGATTGATGCTGACGTGTTTTCAAAATCTGAT
CCAATGGTGGTCATGTTTGTTCAAGGAATTGGCTCTAAAGAATGGAGAGAGTTTGGAAGA
ACTGAGGTCATTATGAATACTCTTAATCCAGATTTTGTGAAAAAGTTCGTAATTGATTAC
TTTTTTGAAGAGAGACAAGCATTGCGCTTTGATGTGTATGATATCGACTCAAAGAACCAG
TCGCTCTCTAAACATGATTTCTTGGGGCAGTGTTTTTGCTCTCTTGGTGAAATAGTAGGA
AGCCTTGGCAGTAAGTTTCAAGCACCACTAAAAATTGATACAAGAGCTAAAGGCCAGATT
ATCATCACTGCTGAGGAACTAGATGGATCTAAAGATGTTGCCAAGATGCAATGGAATGGC
AGAAAATTGGACAAGAAAGATTTCTTTGGAAAATCTGATCCATTCATGGTTTTTTGTAGA
TGTAATGAAGACAACAGCTTCACTGTGTGTCACAAATCAGAGGTAATTAAAAACACCCTG
AATCCAAACTGGAAACCAATGGAAATTCCTGTGAGAACCTTGTGCAATGGAGATTATGAT
AGAACAATCAAAGTTGAGGTTTATGACTGGGACCGTGATGGAGGGCACGATCTGATCGGT
ATATTTGCCACAAGCATCAGGCAGATGCTTGCTGGACCCGGTATTGAGAATACATATGAG
TGCATTAATCCAAAGAAGAGAGAAAAAAAGAAGAAAAACTACAAGCATTCCGGCTTGGTT
AACCTCCTAAGCTTCAAAATAGAAAAACAAGCAACTTTTTTGGAATACATACAGGGCGGA
ACGGAACTCAATTTTGTCGTTGCAATCGATTTCACTGCTTCAAATGGGAACCCGCTGCAG
CCAAACTCTTTACATTACGTAAATCCGTATGTTCCAAACCAATATGCACTTGCCATACAG
GCTGTTGGTGATATTATCCAAGATTATGATTCAGACAAGCTATTCCCTGCCTTTGGCTTT
GGTGCAAGACTTCCACCAAACGGTCAAGTTTCTCATCAGTTTCCAATTAATTTTAAACCG
GACACTCCCTCTTGTCACGGAATTCAGGGAGTCATGGAAGCATACCAAAGCTGCATCAGG
AAAGTTCAGTTGTACGGCCCCACCAATTTTTCACCGATAATCAGAAATGTGGCATCCATG
GCATCGCAGATTAGCGATGCTTCTCAGTATTTCGTTCTACTGATGATAACTGATGGGGTT
ATTTCAGATATGGGTGCCACTCGCGAGGTAATAGTTAAAGCAGCTCGCCTTCCTATGTCC
ATTATTATCATTGGTGTAGGGAATGATGAATTTGAAGCTATGGAAGAGCTCGACGGCGAT
ACCGTGAGATTATCACACCGAGGTATACAAGCGGAAAGAGACATCGTGCAGTTTGTGCCA
TTTCGAGATTTTGTCGCACAAGGCCGAAGTCAAATACTAAGCCAGGCACGTCTAGCAAAA
GAAGTTCTTGCAGAAATTCCCGATCAAGTCGTAAGTTATATGAAATCACGTAACTTGAAG
CCGGGACCACTTCCACCTAGCTATTGTGCAGTTGACCCCCTTCAAAAATAA
| Gene3D |
C2_domain_sf (IPR035892) - T[31-165] 9.3E-21 - T[175-305] 8.4E-19 |
| SMART |
C2_dom (IPR000008) - T[39-147] 3.2E-9 - T[156-278] 1.8E-7 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[45-132] 10.96 - T[179-263] 8.962 |
| Pfam |
C2_dom (IPR000008) - T[45-140] 4.8E-13 - T[180-280] 1.2E-11 |
| CDD |
C2B_Copine (IPR037768) - T[172-283] 1.07999E-59 |
| CDD |
Copine (IPR010734) - T[297-549] 8.24075E-114 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[322-517] 3.44E-18 |
| SMART |
VWF_A (IPR002035) - T[322-520] 2.4E-13 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[324-542] 8.509 |
| Pfam |
Copine (IPR010734) - T[343-561] 1.4E-87 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CPNE5_HUMAN | 63.004 % | 711 | 0 |
| CPNE8_HUMAN | 65.333 % | 722 | 0 |
| CPNE9_HUMAN | 62.101 % | 701 | 0 |
