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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S271.g12005.01.t

Possible name(s)

USH2A

Location

S271 [102,520 / 108,520]

Sequences

Amino acid sequence

Length: 649

>Harore.CG.MTP2014.S271.g12005.01.p
MRTVWFIALSLHCCILLTNGQKPKGKGGASGKAPGIKKPEKVPSGQLGEGGVAVAIEPEE
PFFRCRSYLKNGDVKEQKYDQCTSICCGGKVYAKKPGIKCCGSEELGSTYFEGEMACCSW
WTGTGRAYKKSLVDDHKYHCCGSQLIQNGIQGCCYGEGEPQPHDRLRETCCGSNKVKKAF
ANSDCCGDVSTYDRLRQSCPCNDGQVVDAKLPDTKCCKGEGGKQAPYIVKTQFCCNGEVG
TNGTDFCCDSSVGKIGKDVCCDGTVVPVVPPDPAKKACCYDTAYNPKKQACCDVSIGEEK
RDTDRVDWLAPNLPSFLYIKGVIKPITGKNSQCCASIPFDPALSICCEGNVWGKKKDGNT
CCGQYAFFPEKKSFCCNGVVYFSKAVGGDACCGEKFYDSAKTNSLCCNGKLTKKGKNDEC
CDDVAYNSQTHICCDGYSFSKTDGELKIGPVLSFCIFSLIITTHLGDVCCNGIPYFEKKT
TICCELGPSGFFVRPECCGGLGYDGAAGSVCCAGNIFEGFAWPSCCIDQGYDASTHTCCG
STIFPNPNKSALTKCCGDIDSRPYDVFGQMCCDGAIVNVPRGASRRNTECCGTTGTFDPN
TELCCDGKVNKRTDYYLTQCCGIGTYDISTQVCCDGKVRWHEISLRKYL

Nucleotide sequence

Length: 1,950

>Harore.CG.MTP2014.S271.g12005.01.t
ATGCGTACTGTTTGGTTTATAGCACTCTCTTTGCACTGCTGTATTTTGCTCACTAATGGA
CAGAAGCCAAAGGGGAAAGGTGGTGCGTCAGGAAAAGCTCCAGGTATAAAAAAACCAGAA
AAAGTCCCGTCGGGACAACTGGGCGAAGGAGGAGTAGCGGTGGCAATTGAACCAGAGGAA
CCATTCTTCCGCTGTCGATCTTACTTGAAAAACGGTGACGTAAAAGAGCAAAAATATGAC
CAATGTACTTCGATATGTTGTGGAGGGAAAGTTTATGCAAAGAAACCAGGAATAAAATGC
TGTGGATCTGAAGAACTGGGTAGTACTTACTTTGAAGGGGAAATGGCATGTTGCTCATGG
TGGACTGGAACAGGACGAGCATACAAGAAAAGTTTAGTAGATGATCACAAATATCATTGC
TGCGGCTCTCAACTTATTCAAAATGGGATACAGGGATGCTGCTATGGAGAGGGTGAACCG
CAACCACATGACAGATTACGAGAAACATGCTGTGGTTCTAATAAGGTAAAGAAAGCGTTC
GCAAATTCTGACTGTTGCGGGGACGTTTCGACTTACGACAGATTACGACAATCATGCCCA
TGTAATGATGGACAGGTTGTAGACGCAAAACTGCCTGATACAAAATGCTGCAAAGGTGAA
GGAGGGAAACAAGCCCCATATATCGTAAAGACACAGTTCTGTTGTAACGGGGAGGTCGGA
ACGAATGGCACCGACTTTTGTTGCGATTCATCTGTTGGAAAGATTGGAAAAGATGTTTGC
TGTGATGGCACCGTTGTTCCGGTCGTCCCTCCAGATCCTGCAAAAAAAGCGTGTTGTTAT
GATACAGCTTACAATCCAAAGAAACAAGCTTGCTGCGATGTGAGTATAGGCGAGGAGAAG
AGGGACACGGACAGGGTAGACTGGCTTGCCCCAAATTTACCTTCTTTTTTATATATTAAG
GGTGTAATTAAACCAATCACTGGAAAGAATTCTCAATGTTGCGCAAGTATTCCTTTCGAT
CCAGCATTATCAATATGTTGTGAAGGAAATGTGTGGGGAAAGAAAAAAGATGGAAATACT
TGCTGTGGTCAATATGCATTCTTCCCGGAGAAAAAATCATTCTGCTGCAATGGAGTTGTC
TATTTCAGCAAGGCAGTCGGTGGTGACGCATGCTGCGGGGAAAAATTCTACGATTCTGCA
AAAACAAATTCCCTCTGTTGCAACGGTAAACTCACTAAGAAAGGAAAGAACGACGAATGC
TGTGATGATGTCGCTTATAATTCACAGACTCACATCTGCTGTGATGGATATTCATTCTCA
AAAACCGATGGTGAGCTCAAAATAGGGCCAGTGCTATCGTTCTGCATCTTTTCATTGATT
ATAACGACGCATTTAGGTGACGTATGCTGCAATGGAATTCCATATTTCGAAAAGAAAACG
ACGATCTGTTGCGAACTGGGACCAAGTGGGTTCTTTGTCAGACCCGAATGTTGTGGAGGT
CTGGGATATGATGGAGCGGCAGGGTCTGTTTGTTGTGCTGGAAATATATTTGAAGGATTT
GCATGGCCGTCATGTTGCATTGACCAGGGATACGATGCGTCGACTCACACCTGCTGCGGT
TCAACGATATTCCCGAATCCAAACAAATCAGCTCTGACCAAATGCTGCGGTGATATCGAC
TCACGACCATATGATGTGTTCGGTCAGATGTGCTGTGATGGCGCCATTGTCAATGTACCT
AGAGGTGCGAGTCGTAGGAACACAGAATGTTGTGGAACAACAGGAACTTTCGATCCAAAC
ACCGAACTTTGTTGCGATGGAAAAGTGAACAAGAGAACGGATTATTACTTAACACAATGT
TGTGGGATCGGAACTTACGACATTTCAACACAAGTGTGTTGTGATGGGAAGGTGAGATGG
CATGAAATTTCCCTCAGAAAATATCTCTAA

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value