- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S26.g04635.02.t
Possible name(s)
GLI1; GLI2; GLI3
Gene model
Location
S26 [459,727 / 483,624]
Amino acid sequence
Length: 1,795
>Harore.CG.MTP2014.S26.g04635.02.p
MESAHNLQEKRQISSKNKYQQSEIDVVKDSNQYVKYLQSVPIPSPSFHNQLFHPPASHCG
LPTIVYPPLRRTGSLSSGSDSAFSPVHSSRSDEYSVSSTTEKCNKRYRTPSPSRSRSPSP
KHKQALKPSENSDLDSSEARSSAPNKETAAVSSTTSSEEDDERLRMQKHAGRGRRGAIGP
PDYRPPSCGTPLGKITEEEQTRSPQIKRQPSEERELAKQNVSNSRRNNVDVGHSLSHHET
NNKHSFIAPAVPDDKTKNNEQGGSDHHLPISYVQPHIPLDSQIREGRYPFDPRQLNIHSD
PGISGSPVLSDIPFIPMSPHSPMHPPLNGAPGLFMNSGLGNQITSSSFDLYMRSLTGSPT
MSVLSQARGLSPRHSYQGREGEKLPYQYFTSQQANALAAAATFAGMTDAQNGVSSAMPGV
NLVQGIQSQPAINAMKYYQLTPQQRLFAAAANGSMDRSLAMSFDRTGDMSRLSSPFYMRS
RQGRKRALSISPSQSDISLDLNLMIRTSPNSLVPFGGSLGNSRTSSIGSAGSYGHLGARG
ISPSIGFHPRLASPLHPQFLSQQMAVAAANFSGLSAAPSVTSHMGPNIRSLPPHSTMDSR
NGHLSYSMGINAAKSTSQGRNKGSSNSQSHFDNNEGRKTLQQQLSYNQSTIKAEPMSPAI
FSQNKSQHGTGGGQLNAADETETVYETNCGWENCSREFDTQEQLVHHINNDHIHGEKKEF
VCRWKDCARDQKPFKAQYMLVVHMRRHTGEKPHRCTFEGCTKAYSRLENLKTHLRSHTGE
KPYVCDHPGCTKAFSNASDRAKHQNRTHSNEKPYICRIPNCTKRYTDPSSLRKHVKTVHG
PEAHVTKRMKAERRREELKRNDSNEPSIKQESNDDEQNGNKDDNRNSNSDRNNCRPRSPG
STQSNDTNAPNNMNPRSNQSTCTSGSDMSTTPQHSPHANSHHHNNDSGVELNNGHGRDAD
SDGDIVVDENPLPDSTSGGTVGLQSRRRSSLRSTLIHPMVNKKMQSLSLEGTGPGCLPPL
GPDMFSGSILPSLPGTKSEQPNSPYLYNPRNINVPGNGTDEVSSTTISSPKQFLHPNASP
HNKSGTNMKSNQHSSLGTLHRHAALIGQERRDSGTSSGQPSRKPSSVSNASRRSSQASTQ
NANVAGSYDPISIGSSRRSSGASMVHGNNNRSSSNLTTLSPFTLHRLTSKYNEATGKPPP
TPLDRDNYTKSQLGKWLQEDAMARSRGPSSRSSSYANCATASHRQMGPPAPVPPHPPSGP
SNANRRRSDYMRSLRTPQPHEIPNNGVRRASEPIAKTSEQQIDPSKLPDVQRYYSLNNVN
PLPNIRGHNNYHGQSMNGHMQVPGNYPYNNGFLSTGSLQNARQRSDSNGSFYSSESGYQS
NGSNIALNNPVEYQNVQFHNQQHLQNQRMFGNNQQRFMQNGNIPNSGVNENILQENLNAD
MVSGMDGMFPNDHAYESAMMQNFMVTPPRQHQQPYSEQPASNMYHPNYQQPNSIPMRSNS
NGFINTASFVDNSGMQRQHSNGNYHQPIINPNIPPYSMANRQMPGMDQANLVQYPDQNQV
YNSRLHSGGYQAQNSQAYCSNSYNGFNNAPIYTQGEIIPRPPASTTNNNAANMNRYRMSR
LRNAKQSTHPPSSELQQPPNRINCTPDAEIPASYLQEEFIDSIPALHVSGSFDDGLKNRN
YSKMPADSTTGPGEGRAEYIGDGGDDNFDAMSGTNTDVTLPLMSGFSTRLATPQIEKPYT
GSLQQQVTNEQMAAGLGDPLHINPASNMALNSMSSMLSTLAEENKYLQMMPNNGL
Nucleotide sequence
Length: 5,893
>Harore.CG.MTP2014.S26.g04635.02.t
AGATAAATCTAGATAGCTGAATGTCAAGGCCTCTATAAATAAGTCTTGGTGAGTCGCTAA
ACGAAAACGTCCGCTCGCTTCGTGTCATGCTTTTTTATGATGACAAATCCGTGATATGGA
AAGTGCCCATAACCTTCAAGAAAAGCGGCAAATATCAAGTAAAAATAAGTACCAGCAATC
CGAAATAGACGTTGTGAAAGACTCAAACCAGTACGTGAAGTATCTGCAAAGCGTCCCAAT
TCCATCGCCCTCTTTCCACAACCAGTTATTTCATCCACCCGCTTCACATTGCGGATTACC
GACGATAGTCTACCCACCACTGCGGCGCACTGGCAGCTTGTCTTCCGGCAGCGATTCAGC
TTTCTCTCCGGTTCACTCGTCGAGATCGGACGAATACTCTGTTTCTTCAACCACTGAAAA
GTGCAATAAGAGGTATAGGACTCCATCACCCTCAAGATCTAGATCTCCCTCTCCTAAACA
TAAGCAGGCACTGAAGCCAAGCGAAAATAGCGACTTGGATTCGAGTGAAGCGCGGAGTTC
CGCGCCAAATAAGGAGACGGCGGCAGTGAGTAGCACGACGTCTAGCGAAGAGGATGACGA
GCGGCTTCGGATGCAAAAACATGCAGGCCGAGGCCGACGCGGCGCCATCGGTCCACCGGA
TTATCGACCTCCGAGCTGCGGAACGCCACTAGGAAAAATTACTGAGGAAGAACAAACTAG
ATCACCACAGATCAAAAGGCAACCAAGTGAAGAAAGAGAACTAGCAAAACAGAACGTATC
CAATTCGCGCCGCAACAACGTGGATGTGGGACATTCATTATCTCATCACGAAACCAACAA
CAAGCACTCCTTTATCGCGCCTGCTGTACCTGATGATAAAACTAAAAATAATGAACAAGG
AGGATCAGATCATCATCTGCCGATAAGTTATGTGCAACCTCACATCCCCCTGGATTCTCA
GATCAGAGAGGGAAGATATCCTTTTGATCCCAGGCAGCTGAACATACATAGTGATCCTGG
TATAAGTGGCAGTCCTGTGTTGTCAGACATACCTTTCATTCCTATGTCTCCTCACTCACC
AATGCATCCACCATTAAATGGAGCACCTGGTCTGTTCATGAACTCAGGACTTGGGAATCA
AATAACATCATCGTCATTTGACCTCTATATGCGCTCACTCACTGGTTCGCCTACCATGTC
GGTGCTTTCTCAAGCAAGGGGATTGAGTCCTAGACATTCATACCAAGGTCGAGAAGGCGA
GAAACTTCCATATCAGTATTTCACTTCTCAACAAGCTAACGCATTAGCAGCTGCTGCTAC
ATTTGCTGGTATGACAGACGCTCAGAATGGCGTTTCATCTGCTATGCCTGGTGTGAATCT
TGTTCAAGGGATTCAGTCACAACCAGCTATCAACGCAATGAAATATTATCAACTCACACC
CCAGCAGAGGCTGTTTGCAGCTGCGGCAAATGGAAGCATGGATCGCTCCCTCGCCATGTC
TTTTGACCGGACTGGTGACATGTCTCGCTTGTCCAGTCCGTTTTATATGAGGTCCCGTCA
AGGTCGCAAAAGGGCACTTTCCATTTCTCCTTCACAGTCTGACATCAGCCTGGACCTCAA
TCTGATGATCCGCACCTCTCCCAACTCTCTTGTGCCCTTTGGAGGTAGTTTAGGCAATTC
AAGGACTTCTTCAATAGGCAGTGCAGGCAGCTATGGTCACTTGGGTGCTCGAGGCATTAG
CCCCTCCATTGGCTTTCATCCTCGTCTTGCTTCACCACTCCACCCGCAGTTTCTCAGCCA
GCAAATGGCTGTAGCTGCTGCTAATTTCAGTGGCCTCTCTGCTGCACCCAGTGTGACTTC
ACACATGGGACCTAATATTAGATCCCTACCTCCTCACTCTACGATGGACTCAAGAAATGG
TCATTTATCCTATTCGATGGGGATCAATGCAGCTAAATCCACTAGCCAAGGCAGAAATAA
AGGCTCGTCAAACAGCCAGTCACATTTTGATAACAATGAAGGGAGAAAGACTTTACAACA
GCAGCTGTCATACAATCAAAGTACAATTAAAGCAGAACCCATGAGTCCTGCAATATTTTC
ACAAAATAAATCTCAGCATGGTACTGGAGGAGGACAACTAAATGCTGCTGATGAAACGGA
AACCGTTTATGAGACAAACTGTGGATGGGAAAACTGCTCAAGAGAGTTTGATACGCAAGA
GCAACTGGTGCATCACATTAATAATGATCACATCCACGGCGAGAAAAAGGAGTTTGTCTG
CAGGTGGAAGGACTGCGCACGTGATCAAAAACCTTTCAAAGCTCAGTACATGCTCGTGGT
ACATATGAGACGACATACTGGAGAAAAGCCTCACAGATGCACGTTTGAAGGCTGTACGAA
AGCCTATTCCAGGCTTGAAAATTTGAAAACTCACTTGCGATCGCACACTGGTGAGAAACC
TTATGTTTGTGATCATCCAGGATGCACCAAGGCTTTCAGCAATGCTTCTGATCGTGCCAA
GCACCAAAATAGGACACATTCTAATGAGAAACCTTACATATGTCGAATTCCTAATTGTAC
CAAGAGGTACACTGATCCTAGCTCTTTGAGAAAGCATGTTAAAACTGTTCATGGTCCTGA
GGCTCACGTGACAAAGCGAATGAAGGCCGAGCGGAGGCGAGAAGAACTTAAAAGAAATGA
TTCAAATGAACCATCAATCAAACAGGAATCCAACGATGATGAACAAAATGGCAACAAAGA
TGATAATCGCAACTCAAATTCAGACAGAAATAATTGCAGGCCTAGGTCTCCAGGCAGCAC
CCAATCAAATGACACTAATGCTCCAAACAACATGAATCCCCGTAGCAACCAATCAACTTG
CACGTCTGGTTCTGACATGTCGACAACTCCGCAGCACTCTCCCCATGCCAATTCCCATCA
CCACAACAATGATTCTGGTGTTGAATTGAACAATGGCCATGGAAGAGATGCAGACAGCGA
CGGAGACATTGTTGTTGATGAGAACCCTTTACCAGATTCAACTTCTGGAGGCACTGTAGG
TTTACAGTCGAGAAGACGTTCATCGTTGCGTTCCACCTTGATCCACCCGATGGTGAACAA
GAAAATGCAGAGTTTGTCACTGGAAGGAACGGGTCCAGGGTGTTTGCCTCCTCTTGGGCC
AGATATGTTCAGTGGAAGTATTCTACCTTCATTACCAGGAACCAAATCAGAGCAACCTAA
TTCTCCTTATTTGTACAATCCACGAAATATAAATGTACCTGGGAATGGAACCGATGAAGT
CTCATCAACGACTATATCCAGTCCCAAGCAATTTCTTCATCCCAATGCATCTCCTCATAA
CAAATCAGGCACGAACATGAAATCCAATCAGCACTCCAGTTTAGGCACATTGCATCGACA
TGCTGCTCTGATTGGCCAGGAAAGAAGGGATAGCGGGACAAGTTCTGGCCAGCCGAGTCG
AAAACCTTCATCAGTATCCAATGCGAGTCGAAGGTCAAGTCAGGCTTCAACCCAAAATGC
TAATGTAGCTGGTTCATATGATCCCATTTCTATCGGTTCTTCTCGGCGCTCGAGCGGTGC
TTCTATGGTCCATGGAAACAATAATAGGTCTTCATCAAACCTCACAACATTGAGTCCATT
TACCTTACATCGACTTACTTCGAAATACAATGAAGCAACAGGAAAGCCTCCACCTACACC
ACTTGACAGGGACAATTATACAAAAAGTCAGCTTGGAAAATGGCTTCAAGAAGACGCTAT
GGCTCGATCACGAGGGCCCAGTTCAAGATCATCATCTTATGCGAATTGTGCCACTGCCTC
GCACCGCCAAATGGGACCTCCAGCACCTGTACCACCACATCCTCCCAGTGGTCCGAGCAA
TGCAAACAGGAGGCGTAGTGACTATATGCGTTCACTAAGAACCCCACAGCCACATGAAAT
TCCCAATAATGGAGTGAGAAGAGCAAGCGAACCTATTGCCAAAACTTCTGAGCAACAAAT
CGATCCTTCAAAATTACCTGATGTTCAACGCTATTACAGCTTGAATAATGTCAATCCTTT
GCCAAATATCAGAGGCCATAACAATTACCACGGACAGTCCATGAATGGCCATATGCAGGT
TCCAGGCAACTATCCATATAATAATGGGTTTCTTTCTACTGGCAGCTTACAGAATGCCCG
ACAACGATCTGACAGCAATGGCAGTTTCTATAGCAGTGAGAGCGGTTATCAAAGTAATGG
AAGTAACATTGCTCTGAACAACCCAGTAGAATACCAGAATGTACAATTCCACAATCAGCA
GCATCTTCAGAATCAACGAATGTTTGGTAATAATCAACAGCGTTTCATGCAAAACGGAAA
CATCCCTAATAGTGGAGTAAATGAGAATATACTGCAAGAAAACCTAAATGCTGACATGGT
TTCTGGAATGGATGGAATGTTTCCAAATGATCATGCTTATGAGAGTGCAATGATGCAAAA
TTTTATGGTGACACCTCCGAGACAGCATCAGCAACCTTATTCGGAGCAACCAGCTAGCAA
TATGTATCACCCCAACTATCAACAACCGAATTCAATCCCAATGCGTTCAAACTCGAATGG
CTTCATCAACACTGCCAGTTTTGTCGACAATTCGGGAATGCAGCGACAGCACAGTAATGG
AAATTACCATCAGCCAATCATCAACCCCAACATTCCTCCTTATAGCATGGCAAATCGCCA
AATGCCAGGCATGGACCAAGCCAATCTCGTGCAATATCCTGACCAGAATCAAGTTTATAA
CTCTAGGCTGCACAGCGGAGGTTATCAGGCTCAAAATTCTCAAGCCTACTGCTCGAACAG
TTATAACGGATTCAACAATGCTCCTATATATACTCAAGGAGAAATCATACCCAGGCCTCC
TGCAAGCACCACCAATAACAATGCAGCAAACATGAACCGATACAGAATGTCGAGACTGAG
GAACGCCAAGCAGTCGACCCATCCTCCGTCTTCAGAGCTGCAACAACCACCTAATCGTAT
TAACTGCACTCCTGATGCTGAGATACCAGCCTCCTATCTTCAAGAAGAGTTCATTGACAG
TATTCCTGCTTTACATGTATCTGGCAGTTTTGATGATGGGTTAAAGAATCGGAACTATTC
AAAGATGCCTGCTGACAGCACAACAGGCCCCGGTGAGGGGAGAGCAGAATATATCGGTGA
TGGTGGGGATGATAATTTCGATGCAATGAGTGGAACAAATACAGATGTTACTCTTCCTCT
TATGTCTGGATTTTCTACACGTTTGGCTACTCCACAAATTGAGAAGCCATACACAGGAAG
TTTACAACAGCAAGTAACGAATGAGCAAATGGCTGCAGGTTTGGGTGATCCTTTACATAT
AAACCCCGCTTCCAACATGGCTCTAAACAGTATGAGCTCAATGCTCAGCACACTGGCGGA
AGAGAACAAGTATCTCCAGATGATGCCTAATAATGGACTTTGAGCGGACGATAATTCACA
GTGGAAAAGTCAATCAAGAGTTTAGGTTATCAATCATATTCAGCATGGCACTGCATCGCT
ACTTGGAATTAAAGAAATGCAATTTGTTAGGTGTTGATATTCAATTTATATCGTACAAAA
TTTGAAATCATATTTGATTAAGGAATGCTACTACTATTTGCCAAGTTCCCAGACGCCTTC
CCAAGTTGCCTATTCATGTATCGTTCAAACATTTTGTATTCATTCATTGTATCTGTATTT
TCGAAAATCGTAATTTGAAGGACTGGCTAGCCTGTCTTAGGAATCACACCTATGCTTTTT
GATTGTTTTGTATTTTTGTATATAAATTTTTCTATAAGCATATTTTACTATCACTTAATA
AAGCCATTTACAC
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[687-716] 2.53E-7 - T[734-790] 2.07E-17 - T[779-841] 6.15E-9 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[687-719] 9.141 - T[725-752] 10.325 - T[753-782] 14.336 - T[783-813] 13.464 - T[814-844] 10.533 |
| SMART |
Znf_C2H2_type (IPR013087) - T[687-712] 1.4 - T[720-747] 2.3 - T[753-777] 0.0043 - T[783-808] 0.014 - T[814-839] 0.0015 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[689-712] . - T[755-777] . - T[785-808] . - T[816-839] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLI1_HUMAN | 43.785 % | 350 | 1.45E-100 |
| GLI2_HUMAN | 37.312 % | 470 | 2.02E-138 |
| GLI3_HUMAN | 38.454 % | 493 | 1.36E-146 |