Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S267.g01357.01.t

Possible name(s)

HSD17B12; HSD17B3; HSDL1

Gene model

Harore.CG.MTP2014.S267.g01357

Location

S267 [49,463 / 50,372]

Sequences

Amino acid sequence

Length: 302

>Harore.CG.MTP2014.S267.g01357.01.p
MVFEECSVVSLVGFITFSYFLFRFVRFWMHIWNESLYSSTLNFKKFGNWAIITGATDGIG
KAISYEFAQSGLNIVLISRNEEKLKAVANDMRKKYDVEIRYVPVDFTDEDDIYERIKVGI
EGLKIAVLVNNVAVIAPLGRILDSGNYQQYSNDLVRVNINAMLKMSEIVLPNMVERKAGI
IVNVASLVGLRSHPYMSLYSASKSLIIKFTKCLNDEYESRGVKIQCIIPALVATAGMAEI
KSNFMIPTAEQYGKHLIRSIGKSTVTSTSFYAHNIFTFLLGLMPDFLVAKVMRMDLDKPE
AI

Nucleotide sequence

Length: 909

>Harore.CG.MTP2014.S267.g01357.01.t
ATGGTATTTGAAGAATGCTCTGTTGTATCCTTAGTTGGTTTTATCACCTTCAGCTACTTC
CTCTTTCGTTTCGTGCGTTTCTGGATGCACATCTGGAATGAGTCTCTGTATAGCTCGACG
TTGAACTTCAAGAAATTTGGAAATTGGGCGATCATCACCGGAGCAACAGACGGCATTGGC
AAAGCAATCTCTTATGAATTTGCTCAGTCTGGTCTGAACATTGTATTGATTTCTAGGAAC
GAAGAGAAATTGAAGGCAGTCGCCAACGATATGAGAAAGAAGTATGATGTGGAAATTCGC
TATGTTCCTGTTGACTTCACTGATGAAGATGACATTTATGAACGGATTAAAGTGGGTATA
GAAGGCTTAAAAATTGCAGTACTGGTGAATAACGTTGCTGTGATCGCACCGCTCGGACGA
ATTCTTGACAGCGGGAATTATCAGCAATATTCTAATGACCTCGTTCGTGTTAACATCAAT
GCCATGCTAAAAATGTCTGAAATTGTTTTGCCAAATATGGTTGAAAGGAAGGCTGGAATT
ATTGTCAATGTGGCTTCTTTAGTTGGATTGCGTAGTCACCCGTACATGTCGCTTTATTCT
GCTTCCAAGTCGCTCATCATTAAGTTCACAAAGTGCCTTAACGATGAATACGAAAGTAGA
GGTGTCAAGATCCAATGCATTATTCCTGCGTTGGTTGCGACAGCAGGCATGGCTGAAATC
AAAAGCAACTTCATGATTCCCACAGCTGAGCAATATGGGAAACACCTTATAAGGTCTATT
GGAAAATCCACCGTGACAAGCACGAGTTTCTATGCTCATAACATATTTACTTTTCTTCTT
GGATTGATGCCTGATTTTCTTGTTGCTAAAGTGATGAGGATGGATCTTGATAAACCAGAG
GCCATTTGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[47-260] 1.91E-46
PRINTS
SDR_fam (IPR002347) - T[49-66] 4.0E-19 - T[123-134] 4.0E-19 - T[123-134] 5.4E-7 - T[173-189] 4.0E-19 - T[179-187] 5.4E-7 - T[199-218] 4.0E-19 - T[199-218] 5.4E-7 - T[220-237] 4.0E-19
Pfam
SDR_fam (IPR002347) - T[49-241] 9.1E-43

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHB12_HUMAN 36.396 % 185 6.9E-57
HSDL1_HUMAN 37.891 % 176 4.34E-53
DHB3_HUMAN 38.306 % 172 8.68E-52