- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'KH2012:KH.C5.392.v1....' >
- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Transcript 'KH2012:KH.C13.134.v2...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S266.g15691.01.t
Possible name(s)
BCAM; HMCN1; HMCN2
Gene model
Location
S266 [111,505 / 119,125]
Amino acid sequence
Length: 600
>Harore.CG.MTP2014.S266.g15691.01.p
MTDSFYLPFCYYFSVCNAQIQVKVKNVTAIAGDEKVEIPCDYETDISGNPTIEWYDVNNV
RLYSFKKNDQGNTFRGAKTDKDLDITDNGYLVINEAKVTHNLDLSVLTCVVKFDDETSAR
ASLNFMVVKLPTNPAIMQINQYDGGFEGFEIATQKISLGFCRSDFTYPAPSIQFLRRHYC
SNCGAESQPYMISRKYIQTPFNLTIPHILCPLSFYFSTLVQNANLVSFASPILLTNIWLL
FSLFSALPIHSVTAEGQEELIDGESIDDTDDLGDFGLFLDSTIIEDGPDGISKNAEKQLL
KVLDKDDHQANFTCRVQTKYGDKVDTQDYLMPKFNVLYSTDTVELKADKQFAYEGDMLTL
MCIANGFPKPVVKINGETMDSVTIKVSADVDGKTYSCTGNNNGEDDIASNEYTISVLSLK
EPIITGETEVKLGQSLTVTCVTEGTPEPSVAWFFNDAKAQDGGTLTIPKASFLDSGTYTC
KASNGHEYLEKSVDHMVTVKGLELLGDEEEMVSGKKEEEVELECAVQSDTDTTFSWTGTE
DIPLTTLEGKTYTSTVKEGPLTTELSEKVITCMAENKDGIIVTKTFKLPCKFSLYNLDTR
Nucleotide sequence
Length: 1,911
>Harore.CG.MTP2014.S266.g15691.01.t
ATGACAGATTCCTTTTACTTACCGTTTTGCTATTATTTTTCAGTTTGCAATGCACAGATT
CAAGTTAAAGTGAAAAATGTAACTGCGATTGCTGGCGATGAAAAAGTGGAGATTCCATGT
GATTATGAAACTGATATTTCAGGAAATCCTACTATTGAATGGTATGATGTGAACAATGTT
AGACTTTACTCATTCAAGAAAAATGACCAAGGAAATACATTCCGTGGTGCAAAAACTGAC
AAAGATTTAGACATTACAGATAATGGATATCTCGTTATTAACGAGGCGAAGGTGACTCAT
AACCTAGACTTGTCAGTTCTAACTTGTGTGGTGAAATTTGATGATGAGACATCTGCAAGA
GCTTCACTGAATTTCATGGTTGTCAAACTTCCAACGAATCCAGCTATTATGCAAATAAAT
CAATATGATGGAGGTTTCGAAGGATTCGAGATAGCCACGCAAAAAATTTCACTTGGATTC
TGCCGCAGTGATTTCACATATCCAGCACCATCCATCCAGTTCTTGAGAAGACATTATTGT
TCAAACTGTGGTGCAGAATCACAGCCTTATATGATTTCCAGAAAATATATTCAAACTCCA
TTCAATCTCACGATTCCTCACATTCTTTGCCCCTTAAGTTTTTACTTTTCAACACTAGTT
CAGAATGCTAATTTAGTTTCTTTTGCATCACCCATTCTGCTGACTAACATCTGGTTACTT
TTCTCTCTTTTTTCTGCTTTGCCAATTCACTCAGTTACTGCCGAAGGTCAAGAAGAACTC
ATAGATGGCGAATCTATTGATGACACCGATGATTTAGGAGATTTCGGACTGTTTCTCGAC
TCAACAATAATCGAGGATGGCCCCGACGGAATTTCTAAAAATGCTGAAAAACAACTTCTC
AAAGTTTTGGATAAGGATGATCACCAAGCAAACTTTACCTGCCGGGTTCAAACAAAGTAT
GGTGACAAAGTTGATACACAAGATTATTTGATGCCAAAGTTCAATGTTTTATATTCAACT
GACACTGTTGAACTGAAGGCTGATAAACAATTCGCTTATGAAGGAGACATGCTTACTCTG
ATGTGCATAGCCAATGGATTCCCAAAACCAGTTGTAAAAATCAATGGTGAAACTATGGAC
AGCGTTACTATCAAAGTGTCTGCTGATGTAGATGGCAAAACTTATTCATGCACTGGTAAT
AATAATGGAGAAGATGACATTGCATCGAATGAATACACAATATCTGTGCTCAGTCTGAAG
GAACCCATTATCACCGGCGAAACTGAAGTTAAACTCGGACAATCTCTCACTGTTACATGT
GTTACAGAAGGCACTCCCGAGCCATCCGTGGCTTGGTTTTTCAATGACGCAAAAGCACAG
GATGGCGGAACACTCACTATCCCCAAGGCAAGTTTCTTGGACTCTGGAACCTATACATGC
AAAGCTAGCAATGGTCATGAATATCTTGAAAAATCTGTTGATCATATGGTCACAGTGAAG
GGACTTGAACTTCTTGGAGATGAAGAAGAAATGGTTAGTGGAAAGAAAGAAGAAGAAGTT
GAACTTGAATGTGCTGTACAATCTGATACCGACACCACATTCTCGTGGACCGGAACTGAA
GATATTCCTCTTACAACCTTGGAAGGAAAGACCTATACCAGCACAGTCAAAGAAGGTCCT
CTCACTACAGAATTATCTGAGAAAGTCATTACATGTATGGCCGAGAACAAAGACGGAATA
ATTGTTACCAAGACCTTCAAACTTCCATGTAAGTTTTCATTATATAATTTAGATACTAGA
TGAATCAATTTTAAAAATCATGACTTTACAAAAGCAGCTTCCATGAAATATTGGAATAGT
GCCATTATTAAAGTATTGGTATTAAAAATGCAGTATACGGATGCTCGATGA
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[8-124] 7.159 - T[332-415] 7.232 - T[422-494] 13.221 |
| Gene3D |
Ig-like_fold (IPR013783) - T[15-138] 8.5E-6 - T[413-500] 1.5E-16 |
| SMART |
Ig_sub (IPR003599) - T[24-128] 28.0 - T[347-417] 20.0 - T[425-500] 7.0E-10 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[310-408] 1.61E-5 - T[421-493] 1.11E-15 |
| SMART |
Ig_sub2 (IPR003598) - T[431-487] 5.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|