- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S264.g04901.02.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
S264 [72,309 / 83,436]
Amino acid sequence
Length: 940
>Harore.CG.MTP2014.S264.g04901.02.p
MWSNLINPTPRKYSSAVPGYFCRYRSPVFMMFQHHFILFNPFLFPLSDSRKSCAHCKCGL
EYHVGDRSLVKMELHQPNKSRRAHNEVGVSAAVNQQMTLISDDDSGCSLDEYAWVPPGLT
PEQVQKYFSYLTEDQVPYVESAGEKYRIRQLLQQLPPHDNEVRYCNELSKEEKKELKLFS
EQRKHDALGRGAARTFPNNINPAICENCGNRINGGDVGVFSSRAGHAVCWHPNCFVCSVC
HELLVDLIYFYQDGQLYCGRHHAETLKPRCSACDEIIFADECTEAEGRHWHMNHFCCYEC
DIVLGGQRYIMRDEKPYCTRCFESCYAEYCDTCGELIGLDAGQMQYEGQHWHATETCFAC
VRCRRSLLGHPFLPKHGQIFCSKACSVGEDQTHTESDSQYEIPQIPTSHNVRHSLNLENL
SLHDTTWEDSEIIRDSPVLRKIDQHAEVYLNAEELYPSHILNSQCNKSQHATTSRGRDLY
AKNGGSLAKCASSSGAKSSEDKTTNGFTKPVVTSSNGGGGGFLQNTYNSTDSSGYNSSST
IDAIDHARNHLPPGGKLHSSDTLNSNSSNVSKGTTGSMVSTDRGCSMGGHIPASEFVPWK
INSSETGVRKTGTEVQKTIEALRKAQNAAADSSNCVWQKRRPSREQKIDLIKPIAADDAP
QSKIERVTLDQCQKSSFKIIPIPHMSTNVSPNYPKEKPPIPAPRAKYPSMMSARSEVPRV
PPHKPMMAHPLNENLPLVADKSPRHVIVNKVSPVHIQNKDSNCRLSNSDDSTYREYIAST
ENGRSSLPDIAKHAEPKGILKKGRRGTIQCDSDLLSNDSGSNNKETDPYEDSVTIEKTLA
ATVDEIHAHSDDGHENFVRGSRPYNSAKYLESSKPSFKPRLRFLNSFHWHHIEMFNLISL
LKISSLLTHFSLFEFRLSMFILSSNSTLRFLDSALSASRC
Nucleotide sequence
Length: 2,823
>Harore.CG.MTP2014.S264.g04901.02.t
ATGTGGAGTAACCTGATTAATCCAACTCCGAGAAAGTATTCATCAGCAGTCCCAGGGTAT
TTCTGTCGCTATAGAAGCCCAGTCTTTATGATGTTTCAGCATCACTTCATTTTATTCAAC
CCGTTTCTGTTTCCGTTGTCGGATTCTAGAAAATCCTGTGCGCACTGCAAGTGCGGTCTC
GAATACCACGTTGGCGACAGATCTCTTGTCAAAATGGAACTTCACCAGCCGAACAAAAGC
AGAAGAGCTCACAACGAAGTCGGTGTTTCTGCTGCTGTAAACCAACAAATGACACTTATA
TCAGATGACGATAGCGGTTGTTCGTTAGACGAATACGCCTGGGTACCGCCAGGACTTACG
CCAGAACAGGTCCAAAAGTACTTCTCCTACTTAACCGAAGACCAGGTGCCATACGTCGAA
AGCGCCGGTGAGAAGTATCGCATAAGACAACTGCTGCAACAGCTTCCCCCTCATGACAAC
GAGGTAAGGTACTGCAATGAGCTCAGCAAAGAGGAAAAGAAAGAATTGAAGTTATTCAGC
GAACAACGCAAGCACGACGCATTGGGGAGGGGAGCCGCTCGCACGTTCCCAAACAATATA
AATCCAGCGATTTGTGAAAACTGTGGGAATCGTATAAACGGCGGAGACGTCGGAGTTTTT
TCGAGTAGAGCTGGTCACGCAGTGTGCTGGCACCCTAACTGTTTCGTGTGCTCTGTGTGT
CATGAACTCTTGGTCGACCTAATTTATTTTTATCAGGACGGTCAACTTTATTGCGGACGA
CATCACGCCGAAACGTTGAAGCCGCGGTGCTCGGCCTGCGACGAGATTATCTTCGCCGAC
GAGTGTACGGAGGCAGAAGGCAGGCACTGGCATATGAATCACTTTTGCTGCTACGAATGC
GACATCGTCTTAGGTGGACAGCGGTACATAATGCGAGACGAAAAACCGTACTGCACACGT
TGTTTCGAGTCTTGTTATGCGGAATACTGTGATACTTGCGGGGAATTGATTGGTTTGGAC
GCAGGTCAAATGCAGTACGAAGGTCAGCACTGGCATGCCACGGAAACGTGTTTTGCATGT
GTACGATGTCGCCGGTCCCTGTTGGGACATCCTTTCCTCCCTAAGCACGGTCAAATCTTT
TGTTCAAAGGCTTGCAGCGTTGGAGAAGACCAAACTCACACAGAATCCGATTCCCAGTAC
GAAATACCCCAGATTCCCACGTCTCACAACGTACGGCACAGTCTCAATCTCGAGAACCTT
TCTCTCCACGATACGACTTGGGAAGATTCCGAAATCATCCGGGATTCGCCCGTACTTCGT
AAGATAGATCAGCATGCGGAAGTCTATCTGAACGCAGAAGAACTCTACCCGTCACACATA
CTCAACAGTCAATGCAACAAAAGTCAACACGCCACCACCAGCAGAGGCCGCGACCTTTAC
GCAAAAAACGGCGGTTCTTTAGCCAAATGCGCGTCGTCGAGCGGCGCGAAATCTTCCGAA
GACAAAACTACGAACGGGTTTACCAAACCGGTCGTGACATCATCCAATGGCGGTGGAGGA
GGGTTTTTACAAAATACGTATAACAGTACGGATAGCAGCGGCTACAACAGCAGCAGTACC
ATCGACGCCATAGATCATGCTAGAAATCATCTACCTCCGGGCGGCAAATTACATTCGTCC
GACACCCTCAACAGTAATAGTAGTAACGTTAGTAAAGGAACTACGGGAAGCATGGTCAGT
ACAGATAGAGGTTGTTCGATGGGCGGTCACATACCCGCATCCGAATTCGTTCCTTGGAAG
ATTAATTCTTCCGAAACGGGCGTTAGGAAAACTGGAACAGAGGTGCAAAAAACAATAGAG
GCTCTGAGAAAAGCCCAAAATGCCGCTGCAGACAGTAGTAATTGCGTTTGGCAGAAAAGA
CGGCCCTCTCGGGAGCAGAAAATCGACCTTATTAAACCCATCGCGGCAGATGACGCACCT
CAGTCTAAAATTGAACGCGTGACCTTGGACCAATGTCAAAAATCTTCGTTCAAGATTATT
CCTATTCCTCACATGTCGACAAATGTTTCCCCCAACTATCCCAAAGAGAAACCACCCATT
CCCGCGCCGCGAGCCAAGTATCCCTCGATGATGTCGGCGAGATCGGAAGTGCCGCGTGTA
CCGCCTCATAAACCGATGATGGCTCATCCTTTGAATGAAAATTTGCCACTGGTGGCAGAC
AAGAGCCCTCGTCACGTGATTGTGAACAAAGTGTCGCCCGTTCATATTCAGAACAAGGAT
TCGAACTGCAGGTTGTCGAATTCAGACGACTCTACGTATAGAGAATATATTGCAAGTACA
GAGAACGGAAGATCCTCGTTACCCGACATTGCTAAACACGCAGAACCGAAGGGAATACTC
AAAAAAGGTCGTCGAGGAACGATTCAATGCGATTCTGACCTATTGAGCAACGACTCCGGT
TCCAATAATAAGGAAACGGACCCTTATGAAGACAGTGTAACAATTGAGAAAACGTTGGCT
GCCACTGTGGACGAAATACATGCGCATTCCGACGATGGACACGAAAATTTCGTTCGAGGT
TCACGTCCTTACAACAGCGCCAAATATTTGGAATCGTCAAAACCCTCTTTCAAACCACGA
TTGCGATTTCTCAATTCCTTTCATTGGCACCACATCGAGATGTTTAATCTCATCTCCTTG
CTAAAGATCAGTTCACTTCTTACGCACTTTTCTTTGTTTGAATTCCGATTAAGTATGTTT
ATCCTTTCGAGTAATAGCACATTGCGATTTCTCGATTCGGCGCTATCAGCATCTCGTTGC
TAA
| ProSiteProfiles |
PET_domain (IPR010442) - T[93-201] 35.684 |
| CDD |
PET_prickle (IPR033723) - T[101-197] 1.68426E-61 |
| Pfam |
PET_domain (IPR010442) - T[111-192] 1.2E-34 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[203-267] 10.009 - T[268-328] 12.83 - T[329-392] 6.782 |
| SMART |
Znf_LIM (IPR001781) - T[204-261] 1.7E-8 - T[269-321] 5.1E-16 - T[329-384] 2.0E-7 |
| Pfam |
Znf_LIM (IPR001781) - T[205-264] 4.3E-10 - T[270-324] 2.5E-9 - T[330-383] 3.2E-5 |
| CDD |
LIM1_prickle (IPR033725) - T[205-263] 3.22559E-38 |
| CDD |
LIM2_prickle (IPR033726) - T[268-323] 1.12739E-37 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[270-304] . |
| CDD |
LIM3_prickle (IPR033727) - T[328-386] 5.29776E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 72.313 % | 508 | 1.01E-166 |
| PRIC1_HUMAN | 69.132 % | 483 | 2.0E-157 |
| PRIC3_HUMAN | 61.318 % | 451 | 1.12E-147 |
