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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Cisavi.CG.ENS81.R24....' > 
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S2604.g09990.01.t

Possible name(s)

PIKFYVE; PREX1; PREX2

Gene model

Harore.CG.MTP2014.S2604.g09990

Location

S2604 [0 / 1,419]

Sequences

Amino acid sequence

Length: 197

>Harore.CG.MTP2014.S2604.g09990.01.p
SEDELEKLIEDVKNNPPSEDSPPVPDLVNGKDDTASGAQEDVKDENADLVDAFKLSGIIK
DHRYLLTVHRKSFQGLELVKWLEKDKEMDTETALETGKKLLEYHFLSAVRGEETFKNDST
LYRLLRDEPSNALNATVDSNAKPANASDLSIQIRKKILQLYGDYLSADGKCVDYEGIKKS
DLFRQYVQLTGQLQRVS

Nucleotide sequence

Length: 591

>Harore.CG.MTP2014.S2604.g09990.01.t
AGTGAAGACGAGCTTGAAAAACTTATTGAAGATGTGAAGAACAACCCACCCAGTGAGGAT
TCCCCACCTGTTCCTGATCTTGTTAATGGAAAAGACGATACTGCCTCTGGGGCACAAGAA
GATGTGAAAGATGAGAATGCTGATTTAGTAGATGCTTTCAAGTTGAGTGGTATCATCAAG
GATCACAGGTATCTACTGACAGTACATCGCAAAAGCTTTCAAGGTCTTGAACTTGTCAAA
TGGTTGGAAAAGGATAAAGAAATGGATACTGAAACTGCCCTGGAAACTGGTAAGAAGCTG
CTGGAATATCATTTTCTATCTGCTGTCCGTGGTGAGGAAACTTTCAAGAATGACAGTACC
TTGTATCGTCTATTAAGAGACGAACCTTCCAATGCCCTCAATGCCACAGTAGATTCGAAT
GCAAAACCAGCAAATGCCTCAGATTTGTCAATTCAGATTCGAAAAAAAATTCTGCAGCTT
TATGGAGATTACCTGTCTGCAGATGGGAAATGTGTCGACTATGAAGGAATTAAAAAAAGT
GACTTATTTAGGCAATACGTGCAATTGACTGGTCAGCTTCAGAGAGTTAGC

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[38-163] 2.1E-16
SMART
DEP_dom (IPR000591) - T[54-126] 2.1E-12
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[57-139] 2.67E-15
ProSiteProfiles
DEP_dom (IPR000591) - T[59-126] 8.898
Pfam
DEP_dom (IPR000591) - T[59-124] 9.9E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value