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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S25.g15927.01.t

Possible name(s)

AC011462.1; BCKDHA; PDHA2

Gene model

Harore.CG.MTP2014.S25.g15927

Location

S25 [103,010 / 104,595]

Sequences

Amino acid sequence

Length: 385

>Harore.CG.MTP2014.S25.g15927.01.p
MLRIITKTVHHCRKSPNFLSVISRSVHDDPALDKPQYPGYRTEYVDKLEFLEPNVEEGIP
VYRVMDTRGVLVNETQDPKLDNGKLVKMYKSMSMLNSMDRIMYESQRQGRISFYMTNYGE
EGTHVGSAAALDNRDLVFGQYREAGVLMWRGFELNEFMDQCYGNVNDPARGRQMPVHYGS
KELNFCTISSPLATQMPQASGAAYAIKLSDDPDRCVICYFGDGAASEGDAHAALNFAATL
DAPCIFFCRNNGYAISTPTSEQYRGDGIGARGPGLGILTIRVDGNDVFAVYNATKKAREI
AIAESRPILIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRLYLNTKGLWDD
DQDKDWKKISRKQAWILTAITGFQY

Nucleotide sequence

Length: 1,158

>Harore.CG.MTP2014.S25.g15927.01.t
ATGCTGCGTATTATCACTAAAACAGTTCATCATTGTAGAAAGAGTCCCAATTTCCTGTCT
GTGATATCGCGGTCGGTTCATGATGATCCAGCATTGGATAAGCCGCAGTACCCTGGGTAT
AGGACGGAATACGTGGATAAACTTGAATTTCTGGAGCCGAATGTTGAGGAGGGCATCCCA
GTCTACAGGGTAATGGATACACGGGGTGTACTGGTCAATGAAACTCAGGACCCGAAGTTG
GATAACGGGAAACTAGTAAAAATGTACAAGAGCATGTCAATGCTCAATTCCATGGACAGA
ATAATGTACGAGTCACAGAGACAAGGAAGAATATCTTTTTACATGACCAACTACGGTGAA
GAAGGCACGCATGTCGGCAGTGCCGCTGCTTTGGACAATCGCGATCTCGTTTTTGGGCAG
TATCGTGAAGCAGGTGTTCTTATGTGGAGAGGATTTGAACTGAATGAATTCATGGATCAG
TGTTATGGAAATGTCAATGATCCTGCGCGTGGAAGACAAATGCCTGTGCATTACGGATCA
AAAGAACTTAATTTTTGTACTATTAGTTCTCCTCTTGCTACTCAGATGCCACAGGCTTCA
GGAGCTGCATATGCAATAAAGCTCAGTGATGACCCTGACAGATGTGTGATATGTTATTTT
GGAGATGGAGCAGCATCGGAGGGTGATGCACATGCAGCTCTTAATTTTGCCGCAACTCTT
GATGCTCCTTGCATATTTTTTTGCCGTAATAATGGCTATGCCATCTCGACTCCCACTTCA
GAACAATACAGAGGAGATGGGATTGGAGCCAGAGGACCAGGGTTGGGTATACTGACGATA
CGTGTAGATGGGAATGATGTGTTTGCAGTTTATAACGCTACTAAGAAAGCTAGGGAAATT
GCTATTGCAGAGAGTCGACCGATTCTGATAGAGGCAATGACATACAGGATTGGTCATCAC
AGTACCAGTGACGACAGTAGCGCGTACAGGTCTGTGGATGAAGTCAATTACTGGGACAAA
CAAGACCATCCCATTTCAAGGTTACGATTGTACCTGAACACTAAGGGATTATGGGATGAT
GATCAGGATAAAGACTGGAAAAAGATTAGCAGAAAGCAGGCATGGATATTGACTGCGATT
ACAGGTTTTCAATATTGA

InterProScan

PANTHER
BCKDH_E1-a (IPR034616) - T[31-373] 7.9E-179
SUPERFAMILY
THDP-binding (IPR029061) - T[59-368] 4.63E-96
Pfam
DH_E1 (IPR001017) - T[89-372] 3.2E-96

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ODBA_HUMAN 74.487 % 536 0
ODPAT_HUMAN 30.031 % 115 5.54E-29
ODPA_HUMAN 30.887 % 108 1.86E-26