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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S25.g05288.01.t

Possible name(s)

PANX1

Location

S25 [256,176 / 259,284]

Sequences

Amino acid sequence

Length: 547

>Harore.CG.MTP2014.S25.g05288.01.p
MSSSEMIQGLEQASQKHEKEIVIELGSDRILHYVGVYLIIVLAVITKISDLAGKNLSCFP
ANKSTGYNAAFINYASTYCWETPVENVKNLNYCNGFNETKVNLLKKPNLIKGFVQWMPYA
MLLEAFLFALPSAWWHFRVGARLMGHLKFMQLLLNDIYESVKTIPAGIYRKKAYDPNSYY
LDGWGGYNPPHSAAISGETSDQQKSDVFSTHFTKVLPKFLRKRFAAGHMQQDIESQQDIE
LGPTASDSKAVIETQDKTVSEQKKTFDDGTQDDAKSTEGITDPLLKKVLKEKNSSPTESR
KLLDDTMVAFSGEKVPNDQESQENEKFIKKSDVEQDRQTEETGKPKLKRSILARFFLGEM
LDRNLFSMLCYENFASLEHHPYILSVYQLTQTKAAAKDEKGIFPMKQGILRQWCHEENFS
GTFLMWSYILKHVFGILISLVVMGAMSFVLYLASQENWSTSTFKCDVIFHADACVMCTIN
RKRDMLAVMIVNIMVISVYFAMSLVQWCFVRRSGNRATSFYFKDMKDSSNVALLAAFRQA
EKENKKA

Nucleotide sequence

Length: 1,982

>Harore.CG.MTP2014.S25.g05288.01.t
AGTTTTTGCTAAATGGTAGTGAAATAAAATATTATTAAAATGTCTTCAAGTGAAATGATC
CAAGGCCTCGAACAGGCTTCGCAGAAACATGAGAAAGAGATTGTTATCGAACTCGGATCA
GACAGAATTCTTCATTATGTCGGAGTTTACCTCATAATTGTACTTGCGGTGATCACCAAA
ATATCCGATTTGGCAGGAAAAAACCTGTCTTGTTTCCCTGCAAATAAAAGTACGGGATAC
AACGCAGCTTTCATAAACTATGCTTCAACCTATTGCTGGGAAACTCCAGTGGAAAACGTG
AAAAACCTCAATTACTGCAATGGATTTAACGAAACGAAAGTGAATCTTTTAAAAAAACCA
AATTTGATTAAAGGGTTTGTGCAGTGGATGCCATATGCAATGCTACTAGAGGCCTTTCTG
TTCGCTCTACCGTCTGCTTGGTGGCATTTCAGGGTTGGCGCTCGATTGATGGGTCATCTG
AAATTTATGCAGCTTCTCCTGAATGACATCTACGAAAGCGTAAAGACAATTCCTGCTGGA
ATTTATAGGAAGAAAGCGTACGATCCTAATAGCTATTACTTGGATGGCTGGGGTGGATAC
AATCCGCCACATTCAGCAGCCATTTCTGGGGAAACTTCCGATCAACAAAAATCTGACGTC
TTCTCGACGCATTTCACAAAGGTTTTACCAAAGTTTCTGCGCAAACGATTTGCTGCAGGA
CACATGCAGCAGGACATTGAATCACAGCAGGACATTGAATTAGGACCCACGGCAAGTGAT
AGCAAAGCAGTTATTGAAACCCAAGATAAAACCGTATCAGAGCAGAAAAAGACATTCGAT
GATGGAACTCAAGACGATGCGAAAAGCACCGAAGGTATAACTGACCCGTTGTTAAAGAAG
GTGTTGAAAGAAAAGAATTCTTCGCCAACAGAAAGTAGGAAGTTACTGGATGATACAATG
GTGGCATTCTCGGGAGAGAAGGTTCCGAACGACCAAGAATCACAGGAAAATGAAAAATTC
ATCAAAAAGAGTGACGTAGAACAGGACCGGCAAACTGAAGAAACCGGTAAACCGAAATTA
AAAAGATCCATATTGGCCAGATTCTTCCTTGGAGAAATGTTGGACAGGAATTTATTTTCT
ATGCTGTGCTACGAGAATTTTGCATCGCTCGAGCATCATCCCTACATTCTATCGGTTTAT
CAACTAACGCAAACAAAAGCAGCTGCTAAAGATGAGAAGGGAATCTTCCCCATGAAGCAA
GGAATTCTTCGCCAGTGGTGTCATGAGGAAAACTTCAGCGGAACATTTCTTATGTGGAGT
TATATTTTGAAACATGTTTTTGGGATACTTATATCACTCGTCGTTATGGGTGCAATGAGC
TTCGTTCTCTATTTAGCATCCCAAGAAAACTGGAGTACGAGCACGTTCAAATGTGATGTC
ATTTTCCATGCAGATGCCTGTGTCATGTGCACGATAAACAGGAAACGAGATATGCTTGCA
GTCATGATCGTTAACATAATGGTCATCTCAGTTTACTTTGCTATGTCGCTGGTACAATGG
TGCTTCGTAAGAAGAAGTGGAAATAGGGCTACTTCATTTTATTTCAAAGATATGAAGGAT
TCAAGCAATGTCGCCTTGTTGGCTGCCTTTCGACAGGCGGAAAAAGAAAATAAGAAAGCA
TAAGAAGCAACACAGATTAACGATGGACTCAAAATGTTCTCACAATTGAATCGTATTTAT
AGTGTTTAATTAATGATAGTTCTGTGTTTTGAAAACAGTCGGTTGATTATGTCAGGTATA
CTGCATATCGGATGCAATAACGACAAACGAGAGATAATTCAAATAACGCAATACGAGTCC
TTAGGGAGGGCAATTAGCTATTCAGGGTTGGATATATGTTTTCTTCAGTGATACAATTAT
ACAACTATATTTATATATATATGGTATGTGCAGAATTACTAAATAAAATAAGTATCAATG
GA

InterProScan

PANTHER
Innexin (IPR000990) - T[22-462] 3.3E-12
Pfam
Innexin (IPR000990) - T[28-148] 4.5E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value