- Transcript 'Haaura.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C2.216.v2....' >
- Transcript 'Haaura.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L141.11.v3...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S25.g01265.01.t
Possible name(s)
LGR4; LGR5; LGR6
Gene model
Location
S25 [458,456 / 459,798]
Amino acid sequence
Length: 182
>Harore.CG.MTP2014.S25.g01265.01.p
MSARPVPGPRCCLNSTIIRDTKLQYKHKSIGETKRLLCNLLRMLNENRIETLPGMAFAGN
PDIEVLSLENINDQVEFPDFSDCSALQKLTISGGKISSLPLNLCNNLPSLEYLSVDRNRL
RNLSGLQSCQHLTVLRASKNKVVKLRSSEMSNLNTLQELDLSGNDIDEIDQDAFSTMSLQ
RL
Nucleotide sequence
Length: 549
>Harore.CG.MTP2014.S25.g01265.01.t
ATGTCTGCTCGTCCTGTTCCGGGACCCCGATGTTGTCTAAACTCGACTATAATTCGTGAC
ACTAAGCTGCAATACAAACATAAATCTATTGGTGAAACTAAACGATTGCTTTGTAATCTG
CTTAGGATGCTGAATGAAAATAGGATTGAAACTCTTCCTGGAATGGCGTTTGCTGGAAAT
CCGGATATCGAAGTCTTGTCGCTGGAAAATATCAATGATCAAGTAGAATTTCCAGATTTT
TCTGACTGCTCCGCACTACAGAAACTAACTATATCTGGTGGTAAAATCTCCTCGCTTCCT
TTGAATTTGTGCAACAATCTGCCATCGTTAGAATATCTTTCGGTAGATCGAAATCGACTA
CGTAACCTTTCTGGCTTACAGTCCTGTCAGCACCTGACAGTTCTTCGCGCTAGTAAAAAC
AAGGTTGTGAAGCTGAGATCAAGCGAAATGAGTAATTTGAACACTCTTCAAGAATTAGAT
TTAAGCGGAAACGATATAGACGAAATTGACCAGGATGCTTTTTCCACCATGTCACTGCAA
CGATTGTAA
| Pfam |
LRR_5 (IPR026906) - T[17-116] 0.0014 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[21-182] 1.7E-26 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[37-59] 55.0 - T[107-131] 8.1 - T[153-176] 1.0 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[85-105] 5.024 - T[109-130] 7.72 - T[131-152] 4.855 - T[155-176] 8.12 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[131-182] 1.0E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LGR6_HUMAN | 33.553 % | 82 | 1.47E-18 |
| LGR5_HUMAN | 33.333 % | 82.4 | 1.29E-18 |