- Transcript 'KH2012:KH.C5.42.v2.A...' >
- Transcript 'Cisavi.CG.ENS81.R23....' >
- Transcript 'Cisavi.CG.ENS81.R23....' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S258.g11138.01.t
Possible name(s)
SLCO4A1; SLCO4C1; SLCO5A1
Gene model
Location
S258 [3,712 / 9,949]
Amino acid sequence
Length: 712
>Harore.CG.MTP2014.S258.g11138.01.p
MINEPLLYLFLSIYSELCQVACSKNNKLSITSSSFCVMDLGSNENNQEKERENETSGLQT
KQQKAEQTGAVPVTVSSNGISKNSCGYGAWCHPPWLQFFDSAKWFLVFMCTFIFLRSSLN
SGYLNSVLPTMEKRYGMRSADTRLIISSYDIASVLVNVFISYFGGKGHRPRWIGIGSVFV
AIGAGLFSTPQFFSTPYVIPEVATTDNVHEHLCWNQSVTNSSWNSTQCGAQVLDANSGYL
PLFMIANMLVGIGSVPIYSLGVTFLYDNVERHTSSMYIAFVYMVSAIGPPLGYVIGGIML
DRYVDLGVEGVPSSDPRFIGAWWSGFVLFGALILASAIPLLGYPQILPQPHFQLSSAPVT
PVTDDDEEDMNACMKCGKNLKDLLRVSISILTNPTYICVTATGILECSIASAAMSLMSKY
LPTEFSIDPFQSSILIYLGIVLLPSLAGGIFISGYLIKHYRFNKTDCAKILMMFIVFSLI
MLFAGLFIHCPAYDIVGIDESCMNCNCESSLYNPICLKNVTFYNPCTAGCSDVLRHDNGT
QIERITYTGCVCGGLNVTVTQGICDRDCTHTLIPIFVCLFFVSMGASCALMPGIIITLRC
VKYDERTLAMGLQYGLFKLLGNIPSNIYYHSAINKVCLIWVGTTDVCEGESDECQVYNAD
YFHYIYFGLSLGLKFVSAILASITWYLCRKKDMRNRKTKYSETKREKIRNLR
Nucleotide sequence
Length: 2,437
>Harore.CG.MTP2014.S258.g11138.01.t
ATGATCAATGAACCACTGCTTTACTTATTCCTCAGCATTTATTCAGAGTTATGTCAAGTA
GCTTGTAGCAAAAATAACAAATTATCGATTACATCATCATCTTTCTGTGTCATGGATTTG
GGTTCAAATGAAAACAACCAGGAGAAGGAAAGGGAAAATGAAACTTCCGGACTGCAGACG
AAACAGCAAAAGGCTGAGCAAACTGGTGCCGTTCCTGTAACCGTATCAAGCAACGGTATT
TCAAAGAATTCATGCGGATACGGGGCTTGGTGTCACCCGCCTTGGCTTCAGTTTTTCGAT
TCTGCAAAATGGTTCCTCGTTTTCATGTGCACGTTTATTTTTTTGCGAAGTAGTCTCAAT
TCCGGATACCTAAACAGTGTTTTACCAACCATGGAAAAGAGGTATGGAATGAGAAGCGCT
GACACCAGACTTATTATTTCAAGTTATGATATCGCCAGTGTTCTTGTTAACGTTTTCATT
TCCTATTTCGGAGGCAAAGGGCACAGACCGAGATGGATTGGAATCGGTTCTGTATTTGTG
GCAATAGGAGCTGGATTGTTTTCAACACCTCAGTTCTTCTCGACTCCCTACGTTATTCCA
GAAGTAGCAACAACAGACAACGTGCACGAACATCTCTGTTGGAACCAGTCTGTGACAAAC
AGCAGTTGGAATAGCACACAATGTGGAGCACAAGTACTGGATGCTAATTCTGGTTACTTA
CCACTCTTCATGATTGCCAACATGCTCGTAGGAATCGGTTCAGTTCCGATCTACTCACTT
GGTGTAACCTTTTTATATGACAATGTTGAGCGACATACCTCATCGATGTATATCGCTTTT
GTGTACATGGTGTCAGCAATTGGACCACCACTGGGATATGTTATTGGCGGCATTATGCTT
GACCGCTATGTTGACCTAGGTGTTGAAGGTGTCCCATCCAGTGATCCGAGATTTATTGGA
GCTTGGTGGTCCGGTTTCGTTCTATTCGGTGCTCTGATCTTGGCTTCAGCTATTCCACTT
CTTGGATACCCGCAGATCCTTCCGCAACCTCATTTTCAACTAAGCAGCGCTCCTGTTACC
CCTGTTACTGATGATGATGAGGAAGATATGAATGCCTGTATGAAATGTGGGAAAAATCTC
AAAGATTTACTGCGAGTTTCCATATCAATCCTCACCAACCCGACATATATTTGCGTTACA
GCAACAGGAATATTAGAATGTTCCATCGCCTCCGCAGCCATGTCGCTCATGTCAAAATAT
CTGCCGACTGAATTTAGCATTGATCCATTTCAATCTAGTATTTTAATTTATTTGGGAATT
GTTCTGCTTCCAAGTTTAGCTGGAGGTATTTTCATCAGTGGATACCTCATCAAACATTAC
CGATTTAACAAAACAGACTGCGCGAAAATTTTGATGATGTTCATCGTTTTCTCTCTTATT
ATGCTTTTTGCAGGTCTATTTATCCACTGTCCTGCATACGATATTGTGGGGATCGATGAG
TCGTGCATGAATTGCAACTGCGAATCGTCTTTATACAACCCGATCTGTCTCAAGAATGTT
ACTTTTTATAATCCATGCACAGCTGGATGTTCTGATGTATTGAGGCATGATAATGGAACA
CAGATCGAACGAATCACATACACAGGCTGCGTTTGCGGTGGACTCAACGTAACAGTAACA
CAGGGGATTTGTGATCGAGATTGCACACACACGCTTATTCCAATATTTGTGTGCTTGTTC
TTTGTTTCAATGGGTGCAAGCTGTGCATTGATGCCAGGAATAATAATTACATTACGATGC
GTCAAATATGATGAAAGGACGTTAGCGATGGGATTGCAGTACGGACTTTTTAAATTATTA
GGCAATATCCCTTCCAACATTTACTATCATTCAGCAATTAATAAAGTTTGTCTTATATGG
GTTGGAACAACAGATGTATGTGAAGGTGAATCTGATGAATGTCAGGTATACAATGCGGAT
TACTTCCATTACATTTACTTCGGTCTCTCATTAGGGCTGAAATTTGTTTCTGCTATTTTG
GCGTCCATCACATGGTATCTGTGTCGAAAAAAAGACATGCGTAATCGCAAGACAAAGTAT
AGCGAGACAAAACGAGAAAAAATAAGAAATTTGAGATAGACCAAGAAATGATGTGTTCAT
GAGAGAGATGCAAATCATAAAAATAACAAACTGCTTATTTCTGAAGTATTTCATCAGCAC
CAATTAACTAAAAATAATGTTAGAAGTGATAAATGTATTTATGCATTCAGTACGCACATA
AAGTGTCTTCTTTTATTTCTTATTGTATTCGAGTGACTCTGTTTTAACCCCAGCATATTT
TCTTCTTACAGTTTCAGTATTAATCGGTGTTTTTCCATTAAAAATACTTTTGTACTTTTA
TTCAACATTTGCAATGAAATTTGCTGTACTTGGTAAT
| PANTHER |
OATP (IPR004156) - T[77-704] 6.2E-162 |
| TIGRFAM |
OATP (IPR004156) - T[83-690] 2.0E-119 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[96-198] 4.58E-25 - T[243-350] 4.58E-25 - T[377-492] 4.58E-25 - T[570-632] 4.58E-25 |
| Pfam |
OATP (IPR004156) - T[104-662] 1.5E-134 |
| CDD |
MFS_dom (IPR020846) - T[107-347] 2.24798E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO4A1_HUMAN | 30.898 % | 271 | 1.59E-80 |
| SO4C1_HUMAN | 28.407 % | 266 | 5.44E-79 |
| SO5A1_HUMAN | 33.535 % | 338 | 8.77E-105 |