- Transcript 'Cisavi.CG.ENS81.R122...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S258.g04606.04.t
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
S258 [132,595 / 135,581]
Amino acid sequence
Length: 264
>Harore.CG.MTP2014.S258.g04606.04.p
MFICSGRLANLLGQHKGPIFALKWNKQGNYILSAGVDKTTIIWDARSGESKQQFPFHHAP
ALDVDWQNNTCFASCSTDMSIHVCRLGCDKPVKTFKGHSNEVNAIKWDPSGSLLASCSDD
MTLKVWSMKQDTYVHDLRAHNKEIYTIKWSPAGPGSQNPNQNLLLASASFDSTVRLWESE
RGVCLHTLTKHQEPVYSVAFSPDGRLLASGSFDKCVHIWNTQSGQLVRSYEGTGGIFEVC
WNALGTKVGASASDGTVCVLDLRK
Nucleotide sequence
Length: 795
>Harore.CG.MTP2014.S258.g04606.04.t
ATGTTTATTTGCTCCGGTCGTCTCGCGAATCTCCTCGGTCAGCACAAAGGTCCAATATTC
GCTTTGAAATGGAACAAGCAAGGAAACTACATATTGAGCGCTGGTGTCGACAAAACAACT
ATAATATGGGATGCGAGATCTGGAGAATCAAAACAACAATTCCCTTTTCATCATGCACCA
GCACTTGACGTCGACTGGCAAAACAACACGTGCTTTGCTTCTTGTTCGACAGATATGAGT
ATACATGTGTGTAGGCTAGGATGCGACAAACCAGTAAAAACATTTAAAGGTCATTCGAAT
GAAGTGAATGCAATAAAATGGGATCCTTCAGGAAGTTTACTAGCTTCGTGTTCCGATGAC
ATGACGTTGAAAGTTTGGTCGATGAAACAAGATACATATGTTCATGATTTAAGAGCTCAT
AACAAAGAAATATATACAATTAAATGGAGTCCAGCAGGTCCGGGGTCACAGAATCCCAAT
CAGAATTTGCTGCTTGCAAGTGCATCTTTTGATTCAACTGTACGACTCTGGGAATCTGAA
CGTGGAGTTTGTCTTCATACATTGACGAAACATCAAGAACCAGTGTATTCTGTTGCATTC
AGTCCTGACGGTCGTTTGTTAGCAAGTGGTTCATTTGATAAATGCGTCCATATATGGAAC
ACGCAGAGCGGTCAGTTGGTTCGAAGTTACGAAGGAACGGGAGGAATATTTGAAGTTTGT
TGGAATGCGCTAGGGACAAAAGTTGGAGCAAGTGCTTCAGATGGAACGGTTTGTGTGCTA
GATCTACGAAAATGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[3-264] 5.1E-120 |
| SMART |
WD40_repeat (IPR001680) - T[5-44] 2.7E-6 - T[47-85] 0.059 - T[88-127] 1.3E-11 - T[130-178] 1.8E-7 - T[181-220] 6.2E-13 - T[223-261] 0.4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[8-262] 7.94E-65 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[12-53] 13.683 - T[95-136] 16.29 - T[137-187] 10.508 - T[188-229] 17.426 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[12-229] 45.665 |
| Pfam |
WD40_repeat (IPR001680) - T[13-44] 8.7E-4 - T[90-127] 1.1E-10 - T[134-177] 4.3E-4 - T[182-220] 9.2E-11 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[31-45] . - T[165-179] . - T[207-221] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[114-128] 8.0E-7 - T[165-179] 8.0E-7 - T[207-221] 8.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 83.398 % | 471 | 8.48E-167 |
| TBL1X_HUMAN | 84.942 % | 477 | 3.14E-168 |
| TBL1Y_HUMAN | 82.946 % | 461 | 1.37E-162 |