- Transcript 'KH2012:KH.C1.96.v1.A...' >
- Transcript 'Moocul.CG.ELv1_2.S93...' >
- Transcript 'KH2012:KH.C1.96.v1.A...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S258.g04606.03.t
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
S258 [126,468 / 129,594]
Amino acid sequence
Length: 409
>Harore.CG.MTP2014.S258.g04606.03.p
MLTRNLLTVKYLFAGFHHSAFVFGLESHISQSNINGALVPSAALISIIQKGLQYVEAEIS
INEDGMIFEGRFSESLSLVDAVMPDVVLARQQQLREKLAAQKLQQEQEKLRAAQKSSEEM
KAANGDTNQQDNGGVPVAPVTNVSSATSQLSTSSTMSNSDNTVTMTMPVVTAATSTTSIN
QEPQLNGDSTANMNGIGTPNDLNSQGHQEPMEIENNYNDIKISLSKATVLRGHDSEVFIC
AWNPTCDLLASGSGDSTARIWNLKEDTVTSSSTASASGQQLVLRHCIKEGNQEVPSNKDV
TSLDWNCDGTLLATGSYDGFARIWGTDGEFIIYILLVTLGLRDQIHEIVKLELNAIRKVM
VSFYYDEYFLKVGSHSSEVVTKTLAQNRCSSSLCIHSKLSFSSVLKNLK
Nucleotide sequence
Length: 1,230
>Harore.CG.MTP2014.S258.g04606.03.t
ATGTTGACAAGAAACCTATTGACTGTCAAATATCTCTTTGCAGGTTTCCATCACAGTGCG
TTTGTATTTGGGCTTGAGTCTCACATCAGTCAATCAAATATTAACGGAGCTCTTGTACCG
TCAGCTGCACTTATATCAATAATTCAGAAAGGACTGCAGTACGTCGAGGCAGAAATAAGC
ATAAACGAGGATGGAATGATATTCGAAGGTCGATTTAGTGAAAGCCTTTCTCTGGTAGAC
GCCGTCATGCCAGATGTCGTGCTAGCAAGGCAACAACAATTAAGAGAAAAACTAGCCGCT
CAAAAACTCCAACAAGAGCAGGAGAAATTACGGGCAGCACAAAAGTCATCAGAAGAAATG
AAAGCCGCCAATGGTGATACGAACCAACAGGACAATGGCGGCGTGCCTGTCGCACCTGTC
ACGAACGTTTCATCAGCAACGTCACAATTGTCAACCTCGTCGACTATGAGTAACTCTGAT
AATACCGTTACCATGACAATGCCAGTAGTAACGGCAGCGACCTCAACGACCTCTATAAAT
CAAGAACCTCAATTGAACGGAGATAGCACAGCAAATATGAATGGAATAGGCACGCCGAAC
GACCTGAATTCACAAGGTCATCAAGAACCTATGGAAATAGAAAACAATTATAATGACATC
AAGATCTCGTTAAGTAAAGCGACTGTTCTACGAGGACACGACTCGGAAGTTTTCATATGT
GCTTGGAATCCAACGTGCGATCTGCTTGCTTCTGGCTCTGGTGACTCAACAGCGAGAATA
TGGAATTTAAAAGAAGATACCGTTACATCTAGCTCAACAGCATCAGCTAGTGGACAGCAG
TTAGTGCTCAGACATTGTATCAAGGAAGGAAATCAGGAGGTTCCTAGTAATAAGGACGTC
ACATCGTTAGATTGGAATTGCGATGGAACGCTCTTAGCGACCGGCTCTTACGATGGTTTC
GCGAGAATATGGGGAACGGACGGTGAGTTCATTATATATATTTTACTGGTGACTCTCGGT
CTTCGGGACCAAATCCACGAGATTGTAAAATTAGAACTTAACGCAATTCGTAAAGTCATG
GTAAGTTTTTATTACGATGAGTACTTCTTGAAGGTCGGAAGTCATAGTTCGGAGGTCGTA
ACTAAAACACTCGCACAGAACCGCTGCAGCTCTTCACTCTGCATTCATAGCAAGCTTTCA
TTTTCTTCAGTGCTGAAAAATTTGAAATGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[218-407] 1.2E-35 |
| SMART |
WD40_repeat (IPR001680) - T[223-262] 4.7E-8 - T[280-325] 2.6E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[228-262] 1.9E-5 - T[297-324] 5.9E-5 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[228-398] 6.04E-18 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[230-334] 15.267 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[230-271] 15.087 - T[300-324] 10.074 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[249-263] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 47.368 % | 180 | 1.44E-51 |
| TBL1X_HUMAN | 47.234 % | 181 | 1.25E-51 |
| TBL1Y_HUMAN | 43.873 % | 273 | 4.84E-87 |