- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C14.172.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S258.g04606.02.t
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
S258 [126,468 / 135,581]
Amino acid sequence
Length: 586
>Harore.CG.MTP2014.S258.g04606.02.p
MLTRNLLTVKYLFAGFHHSAFVFGLESHISQSNINGALVPSAALISIIQKGLQYVEAEIS
INEDGMIFEGRFSESLSLVDAVMPDVVLARQQQLREKLAAQKLQQEQEKLRAAQKSSEEM
KAANGDTNQQDNGGVPVAPVTNVSSATSQLSTSSTMSNSDNTVTMTMPVVTAATSTTSIN
QEPQLNGDSTANMNGIGTPNDLNSQGHQEPMEIENNYNDIKISLSKATVLRGHDSEVFIC
AWNPTCDLLASGSGDSTARIWNLKEDTVTSSSTASASGQQLVLRHCIKEGNQEVPSNKDV
TSLDWNCDGTLLATGSYDGFARIWGTDGRLANLLGQHKGPIFALKWNKQGNYILSAGVDK
TTIIWDARSGESKQQFPFHHAPALDVDWQNNTCFASCSTDMSIHVCRLGCDKPVKTFKGH
SNEVNAIKWDPSGSLLASCSDDMTLKVWSMKQDTYVHDLRAHNKEIYTIKWSPAGPGSQN
PNQNLLLASASFDSTVRLWESERGVCLHTLTKHQEPVYSVAFSPDGRLLASGSFDKCVHI
WNTQSGQLVRSYEGTGGIFEVCWNALGTKVGASASDGTVCVLDLRK
Nucleotide sequence
Length: 1,761
>Harore.CG.MTP2014.S258.g04606.02.t
ATGTTGACAAGAAACCTATTGACTGTCAAATATCTCTTTGCAGGTTTCCATCACAGTGCG
TTTGTATTTGGGCTTGAGTCTCACATCAGTCAATCAAATATTAACGGAGCTCTTGTACCG
TCAGCTGCACTTATATCAATAATTCAGAAAGGACTGCAGTACGTCGAGGCAGAAATAAGC
ATAAACGAGGATGGAATGATATTCGAAGGTCGATTTAGTGAAAGCCTTTCTCTGGTAGAC
GCCGTCATGCCAGATGTCGTGCTAGCAAGGCAACAACAATTAAGAGAAAAACTAGCCGCT
CAAAAACTCCAACAAGAGCAGGAGAAATTACGGGCAGCACAAAAGTCATCAGAAGAAATG
AAAGCCGCCAATGGTGATACGAACCAACAGGACAATGGCGGCGTGCCTGTCGCACCTGTC
ACGAACGTTTCATCAGCAACGTCACAATTGTCAACCTCGTCGACTATGAGTAACTCTGAT
AATACCGTTACCATGACAATGCCAGTAGTAACGGCAGCGACCTCAACGACCTCTATAAAT
CAAGAACCTCAATTGAACGGAGATAGCACAGCAAATATGAATGGAATAGGCACGCCGAAC
GACCTGAATTCACAAGGTCATCAAGAACCTATGGAAATAGAAAACAATTATAATGACATC
AAGATCTCGTTAAGTAAAGCGACTGTTCTACGAGGACACGACTCGGAAGTTTTCATATGT
GCTTGGAATCCAACGTGCGATCTGCTTGCTTCTGGCTCTGGTGACTCAACAGCGAGAATA
TGGAATTTAAAAGAAGATACCGTTACATCTAGCTCAACAGCATCAGCTAGTGGACAGCAG
TTAGTGCTCAGACATTGTATCAAGGAAGGAAATCAGGAGGTTCCTAGTAATAAGGACGTC
ACATCGTTAGATTGGAATTGCGATGGAACGCTCTTAGCGACCGGCTCTTACGATGGTTTC
GCGAGAATATGGGGAACGGACGGTCGTCTCGCGAATCTCCTCGGTCAGCACAAAGGTCCA
ATATTCGCTTTGAAATGGAACAAGCAAGGAAACTACATATTGAGCGCTGGTGTCGACAAA
ACAACTATAATATGGGATGCGAGATCTGGAGAATCAAAACAACAATTCCCTTTTCATCAT
GCACCAGCACTTGACGTCGACTGGCAAAACAACACGTGCTTTGCTTCTTGTTCGACAGAT
ATGAGTATACATGTGTGTAGGCTAGGATGCGACAAACCAGTAAAAACATTTAAAGGTCAT
TCGAATGAAGTGAATGCAATAAAATGGGATCCTTCAGGAAGTTTACTAGCTTCGTGTTCC
GATGACATGACGTTGAAAGTTTGGTCGATGAAACAAGATACATATGTTCATGATTTAAGA
GCTCATAACAAAGAAATATATACAATTAAATGGAGTCCAGCAGGTCCGGGGTCACAGAAT
CCCAATCAGAATTTGCTGCTTGCAAGTGCATCTTTTGATTCAACTGTACGACTCTGGGAA
TCTGAACGTGGAGTTTGTCTTCATACATTGACGAAACATCAAGAACCAGTGTATTCTGTT
GCATTCAGTCCTGACGGTCGTTTGTTAGCAAGTGGTTCATTTGATAAATGCGTCCATATA
TGGAACACGCAGAGCGGTCAGTTGGTTCGAAGTTACGAAGGAACGGGAGGAATATTTGAA
GTTTGTTGGAATGCGCTAGGGACAAAAGTTGGAGCAAGTGCTTCAGATGGAACGGTTTGT
GTGCTAGATCTACGAAAATGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[218-586] 7.0E-159 |
| SMART |
WD40_repeat (IPR001680) - T[223-262] 4.7E-8 - T[280-325] 2.6E-4 - T[327-366] 4.3E-6 - T[369-407] 0.059 - T[410-449] 1.3E-11 - T[452-500] 1.8E-7 - T[503-542] 6.2E-13 - T[545-583] 0.4 |
| Pfam |
WD40_repeat (IPR001680) - T[228-262] 3.0E-5 - T[297-324] 9.4E-5 - T[335-366] 0.0027 - T[412-449] 3.2E-10 - T[456-499] 0.0015 - T[504-542] 2.7E-10 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[230-271] 15.087 - T[300-324] 10.074 - T[334-375] 13.683 - T[417-458] 16.29 - T[459-509] 10.508 - T[510-551] 17.426 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[230-551] 53.152 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[249-263] . - T[353-367] . - T[487-501] . - T[529-543] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[249-263] 1.8E-6 - T[487-501] 1.8E-6 - T[529-543] 1.8E-6 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[298-584] 6.59E-70 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 76.06 % | 647 | 0 |
| TBL1X_HUMAN | 76.471 % | 655 | 0 |
| TBL1Y_HUMAN | 64.716 % | 729 | 0 |